Wall clock time and date at job start Tue Mar 31 2020 05:24:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.43196 * 179.97438 * 2 1 4 4 C 1.39464 * 123.23158 * 23.49280 * 3 2 1 5 5 Cl 1.73597 * 121.51388 * 0.02562 * 4 3 2 6 6 N 1.29509 * 116.96735 * 180.28104 * 4 3 2 7 7 S 1.69445 * 108.07522 * 359.75292 * 6 4 3 8 8 C 1.39011 * 123.23283 * 203.31006 * 3 2 1 9 9 N 1.38189 * 127.34763 * 0.03435 * 8 3 2 10 10 C 1.46500 * 120.00245 * 174.82942 * 9 8 3 11 11 C 1.52991 * 109.47551 * 185.05532 * 10 9 8 12 12 C 1.50694 * 115.55588 * 275.76364 * 11 10 9 13 13 H 1.07997 * 120.00456 * 114.59131 * 12 11 10 14 14 C 1.37881 * 119.99721 * 294.59579 * 12 11 10 15 15 N 1.31515 * 120.00061 * 352.73762 * 14 12 11 16 16 Si 1.86805 * 119.99991 * 172.73197 * 14 12 11 17 17 H 1.48508 * 109.46833 * 90.00096 * 16 14 12 18 18 H 1.48498 * 109.47143 * 209.99753 * 16 14 12 19 19 H 1.48495 * 109.47184 * 330.00466 * 16 14 12 20 20 C 1.53004 * 117.49988 * 130.04722 * 11 10 9 21 21 C 1.53002 * 60.00194 * 252.51532 * 20 11 10 22 22 H 0.97003 * 119.99998 * 354.83664 * 9 8 3 23 23 H 1.09005 * 109.46530 * 65.05959 * 10 9 8 24 24 H 1.08998 * 109.47377 * 305.06577 * 10 9 8 25 25 H 0.97003 * 120.00121 * 185.00783 * 15 14 12 26 26 H 1.08999 * 117.49437 * 0.02562 * 20 11 10 27 27 H 1.09000 * 117.49441 * 145.02220 * 20 11 10 28 28 H 1.08995 * 117.49593 * 252.51151 * 21 20 11 29 29 H 1.08996 * 117.51516 * 107.47933 * 21 20 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5679 0.0006 0.0000 4 6 3.3327 -1.0689 -0.4650 5 17 2.5927 -2.5089 -1.0915 6 7 4.6200 -0.9410 -0.4035 7 16 4.9662 0.5807 0.2567 8 6 3.3293 1.0688 0.4601 9 7 2.8693 2.2653 0.9764 10 6 3.8170 3.2408 1.5209 11 6 3.0474 4.4108 2.1368 12 6 2.6256 5.4903 1.1737 13 1 1.5769 5.6645 0.9832 14 6 3.5786 6.2556 0.5356 15 7 4.8452 6.1431 0.8714 16 14 3.0707 7.4523 -0.8059 17 1 2.7710 8.7753 -0.2015 18 1 4.1768 7.5952 -1.7865 19 1 1.8607 6.9379 -1.4960 20 6 3.4286 4.8386 3.5555 21 6 2.1106 4.1025 3.3067 22 1 1.9189 2.4592 0.9784 23 1 4.4590 3.6092 0.7208 24 1 4.4286 2.7645 2.2872 25 1 5.5062 6.7320 0.4749 26 1 4.2281 4.2867 4.0498 27 1 3.3746 5.9013 3.7922 28 1 1.1896 4.6808 3.3798 29 1 2.0425 3.0661 3.6372 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000309499372.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:24:04 Heat of formation + Delta-G solvation = 79.277412 kcal Electronic energy + Delta-G solvation = -16916.874939 eV Core-core repulsion = 13993.182297 eV Total energy + Delta-G solvation = -2923.692642 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 283.024 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -39.26832 -37.71610 -36.63739 -35.91874 -34.96916 -32.30362 -30.36656 -26.71869 -25.54446 -24.13054 -21.90939 -21.44273 -19.69747 -18.89601 -17.74963 -16.42509 -15.75256 -15.35680 -15.25700 -14.85116 -14.30772 -14.00521 -13.40176 -12.99387 -12.90065 -12.84460 -12.68200 -11.89996 -11.70331 -11.65279 -11.25499 -11.12953 -10.99933 -10.76584 -10.64315 -10.56518 -10.52149 -9.86057 -9.25052 -8.88949 -8.65545 -8.52127 -7.77817 -6.33638 -4.41210 0.82553 0.89341 1.14747 1.73300 2.42570 2.91624 3.12901 3.22098 3.25199 3.40134 3.57436 4.17525 4.26020 4.84476 4.99523 5.07613 5.18659 5.52182 5.89629 5.97957 6.15280 6.22591 6.29610 6.41600 6.76215 6.92108 6.98826 7.15936 7.38759 7.61359 7.75806 8.04124 8.59751 9.26183 10.73733 Molecular weight = 283.02amu Principal moments of inertia in cm(-1) A = 0.020624 B = 0.004837 C = 0.004796 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1357.313233 B = 5787.826342 C = 5836.559478 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.433 5.433 2 C 0.294 3.706 3 C -0.259 4.259 4 C 0.255 3.745 5 Cl -0.004 7.004 6 N -0.502 5.502 7 S 0.328 5.672 8 C 0.186 3.814 9 N -0.630 5.630 10 C 0.139 3.861 11 C 0.030 3.970 12 C -0.505 4.505 13 H 0.063 0.937 14 C 0.075 3.925 15 N -0.875 5.875 16 Si 0.892 3.108 17 H -0.279 1.279 18 H -0.283 1.283 19 H -0.272 1.272 20 C -0.157 4.157 21 C -0.207 4.207 22 H 0.416 0.584 23 H 0.098 0.902 24 H 0.057 0.943 25 H 0.266 0.734 26 H 0.069 0.931 27 H 0.086 0.914 28 H 0.082 0.918 29 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.376 -9.611 0.034 9.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.022 4.022 3 C -0.285 4.285 4 C 0.050 3.950 5 Cl 0.024 6.976 6 N -0.325 5.325 7 S 0.466 5.534 8 C -0.064 4.064 9 N -0.251 5.251 10 C 0.018 3.982 11 C 0.029 3.971 12 C -0.542 4.542 13 H 0.081 0.919 14 C -0.130 4.130 15 N -0.511 5.511 16 Si 0.719 3.281 17 H -0.205 1.205 18 H -0.209 1.209 19 H -0.197 1.197 20 C -0.195 4.195 21 C -0.244 4.244 22 H 0.255 0.745 23 H 0.116 0.884 24 H 0.075 0.925 25 H 0.076 0.924 26 H 0.087 0.913 27 H 0.105 0.895 28 H 0.101 0.899 29 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 2.063 -9.628 -0.060 9.847 hybrid contribution -2.021 0.655 -0.771 2.260 sum 0.042 -8.974 -0.831 9.012 Atomic orbital electron populations 1.81219 1.11282 1.07205 1.11384 1.24295 0.90964 0.94107 0.92823 1.15081 0.87228 0.97047 1.29133 1.21169 0.89059 0.89229 0.95548 1.98417 1.80018 1.34507 1.84675 1.76053 1.14392 1.13705 1.28395 1.84561 1.00134 1.08259 1.60411 1.23408 1.01555 0.89547 0.91843 1.44860 1.12225 1.11998 1.55974 1.21788 0.90521 0.87175 0.98761 1.18937 0.96741 0.93873 0.87530 1.20435 0.93007 1.16789 1.23958 0.91860 1.24974 0.94829 0.96705 0.96476 1.69917 1.00920 1.37682 1.42564 0.86582 0.78545 0.81182 0.81815 1.20469 1.20854 1.19670 1.22746 0.95655 0.99604 1.01504 1.22944 0.95057 0.99144 1.07275 0.74543 0.88372 0.92457 0.92420 0.91299 0.89543 0.89945 0.91224 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -7.53 18.54 41.84 0.78 -6.75 15 2 C 0.29 4.72 14.55 -22.48 -0.33 4.39 15 3 C -0.26 -3.87 5.76 -107.23 -0.62 -4.49 15 4 C 0.25 3.68 7.27 -18.07 -0.13 3.55 15 5 Cl 0.00 -0.05 28.56 -51.86 -1.48 -1.53 15 6 N -0.50 -7.31 12.00 31.91 0.38 -6.93 15 7 S 0.33 4.43 23.03 -107.50 -2.48 1.95 15 8 C 0.19 2.75 7.30 -14.40 -0.11 2.64 15 9 N -0.63 -10.06 5.59 -59.78 -0.33 -10.40 15 10 C 0.14 2.49 5.54 -4.05 -0.02 2.47 15 11 C 0.03 0.61 1.31 -155.66 -0.20 0.41 15 12 C -0.50 -11.87 8.82 -34.44 -0.30 -12.18 15 13 H 0.06 1.52 7.82 -52.49 -0.41 1.11 15 14 C 0.07 1.80 5.23 -17.82 -0.09 1.71 15 15 N -0.88 -21.51 12.58 55.43 0.70 -20.82 15 16 Si 0.89 19.21 29.55 -169.99 -5.02 14.19 15 17 H -0.28 -6.05 7.11 56.52 0.40 -5.65 15 18 H -0.28 -6.12 7.11 56.52 0.40 -5.72 15 19 H -0.27 -5.91 7.11 56.52 0.40 -5.51 15 20 C -0.16 -3.05 9.88 -26.73 -0.26 -3.32 15 21 C -0.21 -3.75 9.79 -26.73 -0.26 -4.01 15 22 H 0.42 6.78 8.14 -40.82 -0.33 6.44 15 23 H 0.10 1.97 7.25 -51.93 -0.38 1.60 15 24 H 0.06 0.94 7.91 -51.93 -0.41 0.53 15 25 H 0.27 6.34 8.32 -40.82 -0.34 6.00 15 26 H 0.07 1.23 8.06 -51.93 -0.42 0.81 15 27 H 0.09 1.80 8.14 -51.93 -0.42 1.38 15 28 H 0.08 1.51 8.14 -51.93 -0.42 1.09 15 29 H 0.07 1.14 8.14 -51.93 -0.42 0.72 15 LS Contribution 298.57 15.07 4.50 4.50 Total: -1.00 -24.16 298.57 -7.64 -31.80 By element: Atomic # 1 Polarization: 5.15 SS G_CDS: -2.35 Total: 2.80 kcal Atomic # 6 Polarization: -6.49 SS G_CDS: -2.33 Total: -8.82 kcal Atomic # 7 Polarization: -46.42 SS G_CDS: 1.52 Total: -44.90 kcal Atomic # 14 Polarization: 19.21 SS G_CDS: -5.02 Total: 14.19 kcal Atomic # 16 Polarization: 4.43 SS G_CDS: -2.48 Total: 1.95 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -1.48 Total: -1.53 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -24.16 -7.64 -31.80 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000309499372.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.081 kcal (2) G-P(sol) polarization free energy of solvation -24.161 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.920 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.643 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.803 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.277 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds