Wall clock time and date at job start Tue Mar 31 2020 05:40:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35697 * 117.00029 * 2 1 4 4 C 1.39101 * 119.88796 * 359.73144 * 3 2 1 5 5 C 1.37578 * 120.12291 * 180.27257 * 4 3 2 6 6 C 1.40067 * 119.90673 * 0.02562 * 5 4 3 7 7 C 1.47191 * 120.10717 * 179.97438 * 6 5 4 8 8 O 1.21557 * 120.00174 * 173.61787 * 7 6 5 9 9 C 1.48449 * 119.99667 * 353.62084 * 7 6 5 10 10 O 1.21562 * 119.99741 * 5.28447 * 9 7 6 11 11 N 1.34772 * 119.99706 * 185.28285 * 9 7 6 12 12 C 1.35786 * 119.99906 * 180.02562 * 11 9 7 13 13 H 1.08000 * 120.00422 * 359.97438 * 12 11 9 14 14 C 1.39883 * 120.00212 * 180.02562 * 12 11 9 15 15 N 1.30832 * 119.99857 * 359.97438 * 14 12 11 16 16 Si 1.86807 * 120.00260 * 179.97438 * 14 12 11 17 17 H 1.48493 * 109.46946 * 359.97438 * 16 14 12 18 18 H 1.48500 * 109.46982 * 119.99547 * 16 14 12 19 19 H 1.48502 * 109.47015 * 239.99637 * 16 14 12 20 20 C 1.40042 * 119.79183 * 359.97438 * 6 5 4 21 21 C 1.37686 * 119.86869 * 359.97438 * 20 6 5 22 22 Cl 1.73607 * 119.95310 * 180.02562 * 21 20 6 23 23 H 1.08997 * 109.47501 * 179.97438 * 1 2 3 24 24 H 1.09001 * 109.47222 * 299.99565 * 1 2 3 25 25 H 1.09000 * 109.47810 * 59.99317 * 1 2 3 26 26 H 1.07994 * 119.94043 * 0.26705 * 4 3 2 27 27 H 1.07996 * 120.04786 * 179.97438 * 5 4 3 28 28 H 0.96999 * 120.00279 * 0.02562 * 11 9 7 29 29 H 0.97007 * 120.00119 * 180.02562 * 15 14 12 30 30 H 1.07995 * 120.06439 * 180.02562 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0450 1.2091 0.0000 4 6 1.2851 2.3742 -0.0057 5 6 1.9047 3.6025 -0.0113 6 6 3.3032 3.6793 -0.0120 7 6 3.9707 4.9911 -0.0186 8 8 5.1788 5.0590 0.0978 9 6 3.1685 6.2313 -0.1675 10 8 1.9545 6.1711 -0.1873 11 7 3.7861 7.4238 -0.2806 12 6 3.0523 8.5582 -0.4163 13 1 1.9738 8.5049 -0.4339 14 6 3.6933 9.7960 -0.5342 15 7 4.9998 9.8606 -0.5133 16 14 2.6838 11.3566 -0.7215 17 1 1.2387 11.0149 -0.7165 18 1 2.9795 12.2757 0.4067 19 1 3.0309 12.0196 -2.0042 20 6 4.0646 2.5039 -0.0063 21 6 3.4353 1.2793 0.0005 22 17 4.3769 -0.1792 0.0082 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3634 0.5138 0.8900 25 1 -0.3635 0.5139 -0.8899 26 1 0.2068 2.3144 -0.0057 27 1 1.3135 4.5063 -0.0161 28 1 4.7548 7.4717 -0.2651 29 1 5.4444 10.7190 -0.5948 30 1 5.1432 2.5579 -0.0063 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000355008224.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:40:50 Heat of formation + Delta-G solvation = -82.189830 kcal Electronic energy + Delta-G solvation = -18981.118284 eV Core-core repulsion = 15575.378275 eV Total energy + Delta-G solvation = -3405.740009 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.044 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -40.34586 -39.29250 -37.45562 -36.93141 -36.22438 -34.41659 -31.70708 -30.84829 -30.33980 -27.72685 -26.13363 -24.14573 -22.67805 -21.65291 -19.28254 -18.39890 -18.20665 -16.86372 -16.33680 -15.96820 -15.76243 -14.92984 -14.65569 -14.53684 -14.11243 -13.99018 -13.84906 -13.32485 -13.21998 -12.51018 -12.41868 -12.04988 -11.93787 -11.58537 -11.33389 -11.22589 -10.98638 -10.90129 -10.62137 -10.52288 -10.13959 -9.88215 -8.86605 -8.41266 -8.17751 -8.11055 -6.88317 -4.11903 0.75236 1.30105 2.18127 2.20219 3.01501 3.03477 3.07477 3.14286 3.64256 3.82294 4.21412 4.27545 4.74438 4.81186 4.98013 5.03694 5.11114 5.24829 5.31257 5.46572 5.47738 5.76898 5.87330 6.13316 6.38690 6.56246 6.75612 7.10906 7.15678 7.54221 7.90692 8.26047 8.78535 9.13633 9.74698 10.25142 Molecular weight = 283.04amu Principal moments of inertia in cm(-1) A = 0.032787 B = 0.003748 C = 0.003374 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 853.795011 B = 7469.137060 C = 8296.243082 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.306 6.306 3 C 0.159 3.841 4 C -0.222 4.222 5 C -0.020 4.020 6 C -0.174 4.174 7 C 0.385 3.615 8 O -0.466 6.466 9 C 0.364 3.636 10 O -0.595 6.595 11 N -0.488 5.488 12 C -0.296 4.296 13 H 0.118 0.882 14 C 0.031 3.969 15 N -0.853 5.853 16 Si 0.941 3.059 17 H -0.261 1.261 18 H -0.275 1.275 19 H -0.275 1.275 20 C -0.020 4.020 21 C -0.092 4.092 22 Cl -0.064 7.064 23 H 0.101 0.899 24 H 0.059 0.941 25 H 0.059 0.941 26 H 0.140 0.860 27 H 0.190 0.810 28 H 0.404 0.596 29 H 0.285 0.715 30 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.749 -13.812 0.578 14.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.218 6.218 3 C 0.111 3.889 4 C -0.240 4.240 5 C -0.037 4.037 6 C -0.177 4.177 7 C 0.263 3.737 8 O -0.342 6.342 9 C 0.153 3.847 10 O -0.486 6.486 11 N -0.121 5.121 12 C -0.427 4.427 13 H 0.136 0.864 14 C -0.178 4.178 15 N -0.491 5.491 16 Si 0.766 3.234 17 H -0.185 1.185 18 H -0.201 1.201 19 H -0.201 1.201 20 C -0.039 4.039 21 C -0.119 4.119 22 Cl -0.035 7.035 23 H 0.119 0.881 24 H 0.078 0.922 25 H 0.078 0.922 26 H 0.157 0.843 27 H 0.206 0.794 28 H 0.239 0.761 29 H 0.095 0.905 30 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -5.558 -14.017 0.616 15.091 hybrid contribution 0.065 0.674 -0.092 0.683 sum -5.493 -13.343 0.524 14.439 Atomic orbital electron populations 1.23137 0.77934 1.04079 1.01886 1.86077 1.21713 1.26308 1.87724 1.19084 0.90479 0.85153 0.94138 1.21359 1.00392 0.91483 1.10806 1.22920 0.94474 0.99786 0.86526 1.20195 0.94437 0.93397 1.09634 1.22298 0.88225 0.89638 0.73491 1.90543 1.16446 1.89629 1.37615 1.19373 0.88579 0.84516 0.92215 1.90296 1.13161 1.84772 1.60369 1.41753 1.10754 1.05288 1.54339 1.20109 0.93973 0.83162 1.45465 0.86396 1.25745 0.95945 1.00534 0.95592 1.69404 1.08440 1.28403 1.42827 0.85620 0.80049 0.79461 0.78297 1.18453 1.20062 1.20070 1.21137 1.01028 0.88891 0.92876 1.19878 0.88518 0.88441 1.15062 1.98342 1.72030 1.35767 1.97399 0.88093 0.92218 0.92201 0.84262 0.79361 0.76078 0.90476 0.83512 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.20 9.81 101.05 0.99 1.19 16 2 O -0.31 -3.78 9.94 -18.79 -0.19 -3.97 16 3 C 0.16 2.24 6.70 -38.90 -0.26 1.98 16 4 C -0.22 -3.07 9.01 -39.50 -0.36 -3.43 16 5 C -0.02 -0.33 9.28 -39.14 -0.36 -0.69 16 6 C -0.17 -3.19 5.88 -104.90 -0.62 -3.81 16 7 C 0.39 8.20 7.14 -31.74 -0.23 7.97 16 8 O -0.47 -10.37 16.49 5.32 0.09 -10.28 16 9 C 0.36 8.71 7.76 -12.05 -0.09 8.62 16 10 O -0.59 -14.73 12.95 5.31 0.07 -14.66 16 11 N -0.49 -12.36 5.23 -11.70 -0.06 -12.42 16 12 C -0.30 -7.68 9.68 -15.19 -0.15 -7.83 16 13 H 0.12 3.11 7.14 -52.49 -0.37 2.73 16 14 C 0.03 0.76 5.51 -17.36 -0.10 0.66 16 15 N -0.85 -21.57 13.02 55.54 0.72 -20.84 16 16 Si 0.94 18.85 29.56 -169.99 -5.02 13.83 16 17 H -0.26 -5.19 7.11 56.52 0.40 -4.78 16 18 H -0.28 -5.43 7.11 56.52 0.40 -5.03 16 19 H -0.28 -5.43 7.11 56.52 0.40 -5.02 16 20 C -0.02 -0.33 9.37 -39.11 -0.37 -0.70 16 21 C -0.09 -1.39 6.32 -39.42 -0.25 -1.64 16 22 Cl -0.06 -0.88 28.49 -51.86 -1.48 -2.36 16 23 H 0.10 0.57 8.14 -51.93 -0.42 0.15 16 24 H 0.06 0.42 7.66 -51.93 -0.40 0.03 16 25 H 0.06 0.43 7.64 -51.93 -0.40 0.03 16 26 H 0.14 1.51 6.27 -52.49 -0.33 1.18 16 27 H 0.19 3.51 4.82 -52.58 -0.25 3.25 16 28 H 0.40 10.25 7.35 -40.82 -0.30 9.95 16 29 H 0.28 6.62 8.30 -40.82 -0.34 6.28 16 30 H 0.15 2.31 7.66 -52.49 -0.40 1.91 16 LS Contribution 288.44 15.07 4.35 4.35 Total: -1.00 -28.04 288.44 -5.32 -33.36 By element: Atomic # 1 Polarization: 12.69 SS G_CDS: -2.01 Total: 10.67 kcal Atomic # 6 Polarization: 4.11 SS G_CDS: -1.78 Total: 2.33 kcal Atomic # 7 Polarization: -33.92 SS G_CDS: 0.66 Total: -33.26 kcal Atomic # 8 Polarization: -28.89 SS G_CDS: -0.03 Total: -28.92 kcal Atomic # 14 Polarization: 18.85 SS G_CDS: -5.02 Total: 13.83 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.48 Total: -2.36 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -28.04 -5.32 -33.36 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000355008224.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.835 kcal (2) G-P(sol) polarization free energy of solvation -28.036 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.871 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.355 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds