Wall clock time and date at job start Tue Mar 31 2020 05:40:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 O 1.21272 * 120.00016 * 2 1 4 4 N 1.34781 * 119.99829 * 179.97438 * 2 1 3 5 5 C 1.39263 * 119.99773 * 185.57906 * 4 2 1 6 6 C 1.38768 * 120.16195 * 25.22187 * 5 4 2 7 7 C 1.38190 * 120.06222 * 179.78599 * 6 5 4 8 8 Cl 1.73605 * 119.79958 * 180.21068 * 7 6 5 9 9 C 1.38739 * 120.39646 * 0.46842 * 7 6 5 10 10 C 1.37711 * 120.32651 * 359.78258 * 9 7 6 11 11 C 1.39815 * 119.92523 * 359.97438 * 10 9 7 12 12 C 1.47271 * 120.19272 * 179.97438 * 11 10 9 13 13 O 1.21552 * 119.99901 * 185.28821 * 12 11 10 14 14 O 1.34782 * 119.99956 * 5.29012 * 12 11 10 15 15 C 1.34865 * 117.00219 * 179.97438 * 14 12 11 16 16 H 1.08000 * 119.99782 * 359.97438 * 15 14 12 17 17 C 1.38793 * 120.00159 * 180.02562 * 15 14 12 18 18 N 1.31419 * 119.99840 * 0.02562 * 17 15 14 19 19 Si 1.86805 * 119.99716 * 180.02562 * 17 15 14 20 20 H 1.48493 * 109.47016 * 89.99844 * 19 17 15 21 21 H 1.48502 * 109.46705 * 210.00127 * 19 17 15 22 22 H 1.48496 * 109.47122 * 329.99693 * 19 17 15 23 23 H 1.09007 * 109.47128 * 180.02562 * 1 2 3 24 24 H 1.08997 * 109.46950 * 300.00227 * 1 2 3 25 25 H 1.08997 * 109.47192 * 60.00457 * 1 2 3 26 26 H 0.96996 * 120.00129 * 5.86743 * 4 2 1 27 27 H 1.07997 * 119.96954 * 359.97438 * 6 5 4 28 28 H 1.08003 * 119.83460 * 179.77017 * 9 7 6 29 29 H 1.07992 * 120.03634 * 179.97438 * 10 9 7 30 30 H 0.97001 * 119.99784 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1134 1.0502 0.0000 4 7 2.1809 -1.1673 0.0005 5 6 3.5685 -1.1701 0.1178 6 6 4.2180 -0.1119 0.7376 7 6 5.5948 -0.1189 0.8568 8 17 6.3998 1.2058 1.6383 9 6 6.3378 -1.1757 0.3508 10 6 5.7104 -2.2316 -0.2719 11 6 4.3177 -2.2409 -0.3954 12 6 3.6407 -3.3668 -1.0608 13 8 2.4410 -3.3273 -1.2521 14 8 4.3514 -4.4412 -1.4575 15 6 3.6705 -5.4373 -2.0599 16 1 2.6036 -5.3516 -2.2046 17 6 4.3406 -6.5730 -2.4930 18 7 5.6385 -6.6779 -2.3155 19 14 3.3974 -7.9524 -3.3280 20 1 3.3664 -7.7144 -4.7934 21 1 4.0674 -9.2484 -3.0510 22 1 2.0088 -7.9910 -2.8033 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5137 -0.8900 26 1 1.6997 -2.0051 -0.0850 27 1 3.6468 0.7164 1.1300 28 1 7.4137 -1.1700 0.4457 29 1 6.2934 -3.0515 -0.6644 30 1 6.1068 -7.4715 -2.6185 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000727530087.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:40:01 Heat of formation + Delta-G solvation = -92.163672 kcal Electronic energy + Delta-G solvation = -19437.154490 eV Core-core repulsion = 16030.981983 eV Total energy + Delta-G solvation = -3406.172507 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.044 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.66724 -39.12096 -38.08800 -36.42465 -35.48610 -34.34417 -32.38484 -30.97333 -30.72497 -28.56009 -25.74929 -23.51850 -22.96758 -20.59193 -20.31890 -17.96903 -17.65445 -17.16540 -16.87198 -15.74997 -15.32503 -14.97697 -14.70542 -14.68343 -14.30369 -13.88988 -13.46065 -13.30677 -12.88534 -12.67788 -12.32119 -12.08071 -11.86150 -11.73578 -11.57888 -11.27749 -10.91183 -10.64040 -10.54970 -10.27812 -10.04039 -9.78200 -9.23225 -8.78711 -8.61374 -7.97505 -6.62923 -4.25374 0.89093 1.41377 2.17227 2.64130 2.99617 3.08156 3.13921 3.20891 3.35987 3.76036 4.11013 4.35692 4.77443 4.98132 5.05025 5.14510 5.22527 5.33336 5.47451 5.48164 5.74371 5.89730 6.04716 6.31638 6.42944 6.56650 6.66409 6.98543 7.18314 7.58577 7.75046 8.15665 8.49955 8.85002 9.60010 10.53854 Molecular weight = 283.04amu Principal moments of inertia in cm(-1) A = 0.018252 B = 0.005126 C = 0.004030 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1533.691309 B = 5460.686520 C = 6947.078801 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.508 3.492 3 O -0.535 6.535 4 N -0.651 5.651 5 C 0.208 3.792 6 C -0.142 4.142 7 C 0.000 4.000 8 Cl -0.073 7.073 9 C -0.144 4.144 10 C -0.038 4.038 11 C -0.122 4.122 12 C 0.435 3.565 13 O -0.563 6.563 14 O -0.195 6.195 15 C -0.376 4.376 16 H 0.101 0.899 17 C 0.043 3.957 18 N -0.852 5.852 19 Si 0.947 3.053 20 H -0.271 1.271 21 H -0.276 1.276 22 H -0.265 1.265 23 H 0.082 0.918 24 H 0.097 0.903 25 H 0.097 0.903 26 H 0.430 0.570 27 H 0.158 0.842 28 H 0.137 0.863 29 H 0.155 0.845 30 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.133 9.156 5.980 11.376 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.297 3.703 3 O -0.413 6.413 4 N -0.303 5.303 5 C 0.110 3.890 6 C -0.163 4.163 7 C -0.027 4.027 8 Cl -0.044 7.044 9 C -0.163 4.163 10 C -0.058 4.058 11 C -0.126 4.126 12 C 0.285 3.715 13 O -0.464 6.464 14 O -0.100 6.100 15 C -0.451 4.451 16 H 0.118 0.882 17 C -0.163 4.163 18 N -0.487 5.487 19 Si 0.771 3.229 20 H -0.197 1.197 21 H -0.201 1.201 22 H -0.189 1.189 23 H 0.100 0.900 24 H 0.115 0.885 25 H 0.116 0.884 26 H 0.277 0.723 27 H 0.176 0.824 28 H 0.155 0.845 29 H 0.172 0.828 30 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -2.858 9.791 5.950 11.808 hybrid contribution -0.475 -0.994 -0.449 1.190 sum -3.333 8.797 5.501 10.898 Atomic orbital electron populations 1.21830 0.90714 1.04929 1.05316 1.21078 0.91154 0.83076 0.74962 1.90667 1.70379 1.31631 1.48609 1.44184 1.04979 1.11835 1.69305 1.17489 0.83538 0.93607 0.94357 1.21069 0.92696 1.00337 1.02149 1.20850 0.92403 0.90385 0.99073 1.98350 1.79641 1.47088 1.79340 1.20951 1.00521 0.93358 1.01491 1.21392 0.92782 0.97441 0.94138 1.19241 0.93828 0.95433 1.04120 1.20408 0.85566 0.83870 0.81624 1.90386 1.16074 1.81060 1.58900 1.83899 1.40059 1.23981 1.62068 1.21359 0.93917 0.93872 1.35968 0.88180 1.25431 0.95979 0.98045 0.96831 1.69968 1.07497 1.28876 1.42391 0.85608 0.79238 0.78732 0.79290 1.19680 1.20135 1.18914 0.89950 0.88455 0.88394 0.72346 0.82430 0.84500 0.82784 0.91623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.67 10.39 36.01 0.37 -1.30 16 2 C 0.51 7.61 7.74 -10.98 -0.08 7.52 16 3 O -0.54 -9.46 14.28 5.56 0.08 -9.38 16 4 N -0.65 -10.86 4.85 -9.68 -0.05 -10.91 16 5 C 0.21 3.79 6.43 -83.47 -0.54 3.25 16 6 C -0.14 -2.38 8.47 -39.40 -0.33 -2.71 16 7 C 0.00 0.01 6.32 -39.41 -0.25 -0.24 16 8 Cl -0.07 -0.98 28.94 -51.86 -1.50 -2.48 16 9 C -0.14 -2.17 9.80 -39.59 -0.39 -2.56 16 10 C -0.04 -0.68 9.61 -39.18 -0.38 -1.05 16 11 C -0.12 -2.42 5.89 -104.82 -0.62 -3.04 16 12 C 0.44 10.31 7.81 34.40 0.27 10.58 16 13 O -0.56 -13.56 13.06 -19.31 -0.25 -13.81 16 14 O -0.19 -5.23 9.00 -21.81 -0.20 -5.43 16 15 C -0.38 -10.38 9.65 30.94 0.30 -10.08 16 16 H 0.10 2.75 6.86 -52.49 -0.36 2.39 16 17 C 0.04 1.14 5.49 -17.52 -0.10 1.04 16 18 N -0.85 -23.40 13.67 55.49 0.76 -22.64 16 19 Si 0.95 19.94 29.55 -169.99 -5.02 14.92 16 20 H -0.27 -5.59 7.11 56.52 0.40 -5.19 16 21 H -0.28 -5.62 7.11 56.52 0.40 -5.21 16 22 H -0.26 -5.46 7.11 56.52 0.40 -5.06 16 23 H 0.08 0.72 7.92 -51.93 -0.41 0.30 16 24 H 0.10 0.78 8.14 -51.93 -0.42 0.36 16 25 H 0.10 0.88 8.14 -51.93 -0.42 0.45 16 26 H 0.43 7.22 5.85 -40.82 -0.24 6.98 16 27 H 0.16 2.66 5.81 -52.49 -0.30 2.35 16 28 H 0.14 1.71 8.06 -52.48 -0.42 1.28 16 29 H 0.15 2.77 7.62 -52.49 -0.40 2.37 16 30 H 0.27 6.88 8.31 -40.82 -0.34 6.54 16 LS Contribution 288.99 15.07 4.35 4.35 Total: -1.00 -30.70 288.99 -5.69 -36.39 By element: Atomic # 1 Polarization: 9.69 SS G_CDS: -2.12 Total: 7.57 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: -1.74 Total: 1.41 kcal Atomic # 7 Polarization: -34.26 SS G_CDS: 0.71 Total: -33.55 kcal Atomic # 8 Polarization: -28.25 SS G_CDS: -0.37 Total: -28.62 kcal Atomic # 14 Polarization: 19.94 SS G_CDS: -5.02 Total: 14.92 kcal Atomic # 17 Polarization: -0.98 SS G_CDS: -1.50 Total: -2.48 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -30.70 -5.69 -36.39 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000727530087.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.772 kcal (2) G-P(sol) polarization free energy of solvation -30.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.477 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.687 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.391 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.164 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds