Wall clock time and date at job start Tue Mar 31 2020 05:31:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31364 * 1 3 3 Si 1.86796 * 120.00134 * 2 1 4 4 H 1.48494 * 109.47316 * 239.99832 * 3 2 1 5 5 H 1.48501 * 109.47357 * 359.97438 * 3 2 1 6 6 H 1.48501 * 109.47275 * 119.99799 * 3 2 1 7 7 C 1.39042 * 119.99785 * 179.97438 * 2 1 3 8 8 H 1.08007 * 119.99957 * 210.91637 * 7 2 1 9 9 N 1.36881 * 119.99970 * 30.64946 * 7 2 1 10 10 C 1.46500 * 120.00175 * 44.43052 * 9 7 2 11 11 C 1.50703 * 109.46847 * 271.11315 * 10 9 7 12 12 O 1.20830 * 120.00248 * 0.02562 * 11 10 9 13 13 O 1.34225 * 120.00358 * 179.97438 * 11 10 9 14 14 C 1.34780 * 119.99811 * 224.42733 * 9 7 2 15 15 O 1.21599 * 119.99805 * 357.64702 * 14 9 7 16 16 C 1.47652 * 119.99969 * 177.63642 * 14 9 7 17 17 C 1.39694 * 120.16361 * 344.74901 * 16 14 9 18 18 C 1.37876 * 119.85975 * 179.97438 * 17 16 14 19 19 C 1.38436 * 120.19251 * 0.02562 * 18 17 16 20 20 C 1.38290 * 120.32514 * 359.97438 * 19 18 17 21 21 C 1.38141 * 120.13739 * 359.67903 * 20 19 18 22 22 Cl 1.73600 * 120.09495 * 180.32025 * 21 20 19 23 23 H 0.96996 * 119.99872 * 359.97438 * 1 2 3 24 24 H 1.08996 * 109.47622 * 31.11151 * 10 9 7 25 25 H 1.08998 * 109.47086 * 151.11814 * 10 9 7 26 26 H 0.96698 * 117.00870 * 180.02562 * 13 11 10 27 27 H 1.07997 * 120.06858 * 359.97438 * 17 16 14 28 28 H 1.08003 * 119.90033 * 180.02562 * 18 17 16 29 29 H 1.07989 * 119.83758 * 179.97438 * 19 18 17 30 30 H 1.08000 * 119.93042 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3136 0.0000 0.0000 3 14 2.2477 1.6177 0.0000 4 1 3.1014 1.6963 -1.2124 5 1 1.2827 2.7465 -0.0006 6 1 3.1014 1.6964 1.2125 7 6 2.0088 -1.2042 0.0005 8 1 2.9738 -1.2704 0.4811 9 7 1.4678 -2.3070 -0.6033 10 6 0.8406 -2.1867 -1.9217 11 6 -0.6177 -1.8447 -1.7549 12 8 -1.0849 -1.7144 -0.6483 13 8 -1.3972 -1.6838 -2.8357 14 6 1.5121 -3.5037 0.0152 15 8 2.0704 -3.6123 1.0900 16 6 0.8827 -4.6828 -0.6123 17 6 -0.0205 -4.5192 -1.6654 18 6 -0.6042 -5.6246 -2.2471 19 6 -0.2981 -6.8951 -1.7902 20 6 0.5949 -7.0660 -0.7482 21 6 1.1931 -5.9684 -0.1603 22 17 2.3202 -6.1848 1.1422 23 1 -0.4850 0.8400 0.0004 24 1 1.3358 -1.3988 -2.4892 25 1 0.9331 -3.1323 -2.4558 26 1 -2.3259 -1.4647 -2.6786 27 1 -0.2610 -3.5290 -2.0231 28 1 -1.3022 -5.4989 -3.0616 29 1 -0.7589 -7.7568 -2.2497 30 1 0.8294 -8.0601 -0.3971 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000739086849.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:31:39 Heat of formation + Delta-G solvation = -20.395132 kcal Electronic energy + Delta-G solvation = -20676.689484 eV Core-core repulsion = 17273.629094 eV Total energy + Delta-G solvation = -3403.060390 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.044 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -40.37363 -38.72555 -37.48748 -35.92092 -35.26778 -34.35261 -32.45083 -30.66163 -30.38268 -27.89921 -25.33459 -22.88241 -22.31727 -21.17151 -19.60363 -17.33854 -17.01799 -16.73057 -16.48139 -15.83362 -15.16211 -14.80574 -14.64199 -14.20997 -14.01436 -13.57622 -13.19816 -12.88961 -12.62466 -11.98975 -11.91460 -11.73195 -11.38866 -11.16214 -11.06580 -10.74398 -10.53015 -10.42551 -10.32135 -10.13327 -9.51990 -8.84639 -8.70515 -8.40564 -8.31033 -7.62655 -6.22099 -4.03968 1.18673 1.41702 2.63604 3.16023 3.22642 3.26267 3.30559 3.46721 3.85756 4.09938 4.44654 4.60251 4.84287 5.00748 5.12027 5.27878 5.53198 5.57394 5.66395 5.83126 6.02218 6.12251 6.25964 6.39197 6.46303 6.57247 6.95208 7.37594 7.58250 8.17965 8.36557 8.97371 9.07319 9.23603 9.86184 10.59235 Molecular weight = 283.04amu Principal moments of inertia in cm(-1) A = 0.020163 B = 0.007711 C = 0.005894 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1388.330971 B = 3630.293200 C = 4749.408381 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.803 5.803 2 C 0.047 3.953 3 Si 0.905 3.095 4 H -0.271 1.271 5 H -0.286 1.286 6 H -0.270 1.270 7 C -0.339 4.339 8 H 0.097 0.903 9 N -0.416 5.416 10 C 0.105 3.895 11 C 0.412 3.588 12 O -0.399 6.399 13 O -0.546 6.546 14 C 0.501 3.499 15 O -0.537 6.537 16 C -0.099 4.099 17 C -0.131 4.131 18 C -0.124 4.124 19 C -0.106 4.106 20 C -0.124 4.124 21 C 0.002 3.998 22 Cl -0.042 7.042 23 H 0.263 0.737 24 H 0.102 0.898 25 H 0.111 0.889 26 H 0.394 0.606 27 H 0.166 0.834 28 H 0.128 0.872 29 H 0.128 0.872 30 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.626 -8.754 -8.611 12.557 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.437 5.437 2 C -0.163 4.163 3 Si 0.731 3.269 4 H -0.196 1.196 5 H -0.211 1.211 6 H -0.195 1.195 7 C -0.466 4.466 8 H 0.115 0.885 9 N -0.136 5.136 10 C -0.021 4.021 11 C 0.247 3.753 12 O -0.276 6.276 13 O -0.359 6.359 14 C 0.290 3.710 15 O -0.417 6.417 16 C -0.104 4.104 17 C -0.149 4.149 18 C -0.142 4.142 19 C -0.125 4.125 20 C -0.143 4.143 21 C -0.026 4.026 22 Cl -0.013 7.013 23 H 0.074 0.926 24 H 0.120 0.880 25 H 0.129 0.871 26 H 0.251 0.749 27 H 0.182 0.818 28 H 0.146 0.854 29 H 0.146 0.854 30 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -2.120 -8.727 -7.598 11.764 hybrid contribution -0.448 1.125 0.162 1.222 sum -2.568 -7.602 -7.435 10.939 Atomic orbital electron populations 1.70575 1.05673 1.26642 1.40783 1.25661 0.94877 1.00269 0.95522 0.86362 0.79751 0.81364 0.79455 1.19636 1.21143 1.19463 1.19188 1.02728 0.85729 1.38932 0.88506 1.43046 1.49969 1.07263 1.13292 1.21703 0.87504 1.03638 0.89299 1.23701 0.90598 0.78266 0.82784 1.90848 1.72839 1.38398 1.25477 1.84522 1.25888 1.84936 1.40578 1.18182 0.84161 0.83357 0.85303 1.90702 1.45789 1.84390 1.20848 1.20399 0.99247 0.93952 0.96781 1.22947 0.95474 1.01650 0.94855 1.21195 0.99975 0.92355 1.00646 1.21155 0.97527 0.97502 0.96318 1.20980 0.98206 0.97644 0.97481 1.21044 0.95167 0.93508 0.92868 1.98383 1.59035 1.97072 1.46768 0.92600 0.88007 0.87141 0.74946 0.81812 0.85363 0.85398 0.85061 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.80 -21.81 8.68 55.50 0.48 -21.33 16 2 C 0.05 1.24 4.95 -17.45 -0.09 1.15 16 3 Si 0.91 20.04 29.65 -169.99 -5.04 15.00 16 4 H -0.27 -5.79 7.11 56.52 0.40 -5.38 16 5 H -0.29 -6.28 7.11 56.52 0.40 -5.88 16 6 H -0.27 -6.06 7.11 56.52 0.40 -5.66 16 7 C -0.34 -9.27 8.61 -15.00 -0.13 -9.40 16 8 H 0.10 2.75 7.95 -52.48 -0.42 2.33 16 9 N -0.42 -10.45 2.09 -125.17 -0.26 -10.71 16 10 C 0.10 2.16 5.07 -5.19 -0.03 2.13 16 11 C 0.41 8.59 4.74 36.01 0.17 8.76 16 12 O -0.40 -10.10 13.57 -18.75 -0.25 -10.35 16 13 O -0.55 -8.88 13.37 -39.25 -0.52 -9.40 16 14 C 0.50 12.70 7.49 -12.42 -0.09 12.61 16 15 O -0.54 -15.15 14.14 5.28 0.07 -15.08 16 16 C -0.10 -2.07 5.73 -104.94 -0.60 -2.68 16 17 C -0.13 -2.32 7.48 -39.17 -0.29 -2.61 16 18 C -0.12 -1.72 10.03 -39.64 -0.40 -2.11 16 19 C -0.11 -1.35 10.04 -39.49 -0.40 -1.75 16 20 C -0.12 -1.81 9.82 -39.60 -0.39 -2.20 16 21 C 0.00 0.04 6.35 -39.05 -0.25 -0.21 16 22 Cl -0.04 -0.81 26.16 -51.86 -1.36 -2.17 16 23 H 0.26 6.84 8.31 -40.82 -0.34 6.51 16 24 H 0.10 1.99 8.05 -51.93 -0.42 1.57 16 25 H 0.11 1.93 4.68 -51.93 -0.24 1.69 16 26 H 0.39 4.93 9.10 45.56 0.41 5.34 16 27 H 0.17 2.95 1.70 -73.06 -0.12 2.82 16 28 H 0.13 1.38 8.06 -52.48 -0.42 0.96 16 29 H 0.13 1.16 8.06 -52.49 -0.42 0.74 16 30 H 0.13 1.55 8.06 -52.49 -0.42 1.12 16 LS Contribution 273.23 15.07 4.12 4.12 Total: -1.00 -33.61 273.23 -6.44 -40.06 By element: Atomic # 1 Polarization: 7.35 SS G_CDS: -1.19 Total: 6.16 kcal Atomic # 6 Polarization: 6.20 SS G_CDS: -2.49 Total: 3.71 kcal Atomic # 7 Polarization: -32.26 SS G_CDS: 0.22 Total: -32.04 kcal Atomic # 8 Polarization: -34.13 SS G_CDS: -0.70 Total: -34.84 kcal Atomic # 14 Polarization: 20.04 SS G_CDS: -5.04 Total: 15.00 kcal Atomic # 17 Polarization: -0.81 SS G_CDS: -1.36 Total: -2.17 kcal Total LS contribution 4.12 Total: 4.12 kcal Total: -33.61 -6.44 -40.06 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000739086849.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.661 kcal (2) G-P(sol) polarization free energy of solvation -33.614 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.952 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.056 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds