Wall clock time and date at job start Tue Mar 31 2020 05:25:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 N 1.46503 * 109.46811 * 114.56361 * 3 2 1 5 5 C 1.36811 * 119.99562 * 97.48089 * 4 3 2 6 6 H 1.08000 * 119.99455 * 153.56898 * 5 4 3 7 7 C 1.39084 * 119.99747 * 333.56632 * 5 4 3 8 8 N 1.31331 * 120.00699 * 349.15996 * 7 5 4 9 9 Si 1.86810 * 119.99649 * 169.16268 * 7 5 4 10 10 H 1.48501 * 109.46949 * 90.00078 * 9 7 5 11 11 H 1.48501 * 109.47154 * 210.00001 * 9 7 5 12 12 H 1.48497 * 109.46705 * 329.99711 * 9 7 5 13 13 C 1.34769 * 120.00260 * 277.47626 * 4 3 2 14 14 O 1.21588 * 120.00309 * 184.95717 * 13 4 3 15 15 C 1.47840 * 119.99772 * 4.95368 * 13 4 3 16 16 N 1.32901 * 119.75260 * 6.32862 * 15 13 4 17 17 C 1.31537 * 121.63491 * 179.97438 * 16 15 13 18 18 Cl 1.73602 * 119.52114 * 180.02562 * 17 16 15 19 19 C 1.38823 * 120.95411 * 0.02562 * 17 16 15 20 20 C 1.38443 * 119.39870 * 359.71521 * 19 17 16 21 21 C 1.38938 * 118.49139 * 0.54813 * 20 19 17 22 22 F 1.35103 * 120.48817 * 179.72903 * 21 20 19 23 23 H 1.08999 * 109.47363 * 354.56516 * 3 2 1 24 24 H 1.09002 * 109.46767 * 234.56548 * 3 2 1 25 25 H 0.96999 * 120.00608 * 180.02562 * 8 7 5 26 26 H 1.07998 * 120.30286 * 179.97438 * 19 17 16 27 27 H 1.08002 * 120.74910 * 180.30432 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0961 0.5751 -1.2563 5 6 3.4689 1.8904 -1.3076 6 1 4.1956 2.2175 -2.0365 7 6 2.9119 2.8062 -0.4213 8 7 1.8817 2.4624 0.3172 9 14 3.6291 4.5254 -0.2814 10 1 2.9507 5.4250 -1.2488 11 1 3.4239 5.0366 1.0977 12 1 5.0827 4.4812 -0.5817 13 6 3.1778 -0.1922 -2.3612 14 8 3.6665 0.2582 -3.3794 15 6 2.6733 -1.5816 -2.3353 16 7 2.0274 -2.0288 -1.2634 17 6 1.5626 -3.2578 -1.2008 18 17 0.7263 -3.7844 0.2264 19 6 1.7312 -4.1397 -2.2596 20 6 2.3934 -3.7152 -3.3988 21 6 2.8794 -2.4141 -3.4369 22 9 3.5365 -1.9595 -4.5263 23 1 2.9719 -1.0222 0.0973 24 1 2.9711 0.5967 0.8374 25 1 1.4930 3.1012 0.9350 26 1 1.3456 -5.1465 -2.1968 27 1 2.5324 -4.3815 -4.2373 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000758938731.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:25:56 Heat of formation + Delta-G solvation = 10.808501 kcal Electronic energy + Delta-G solvation = -19827.943567 eV Core-core repulsion = 16335.068714 eV Total energy + Delta-G solvation = -3492.874853 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 283.026 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -48.61945 -40.28541 -38.34161 -36.52062 -35.70581 -34.19207 -32.87725 -31.75785 -30.53171 -27.41514 -25.78021 -24.00975 -23.22084 -20.35523 -17.92527 -17.64412 -17.43094 -16.90538 -16.36639 -15.68908 -15.50701 -14.84522 -14.27079 -14.01802 -13.94143 -13.48904 -13.31535 -13.15614 -12.80521 -12.34698 -11.94547 -11.50975 -11.38258 -11.23961 -11.20789 -11.16450 -10.57425 -10.51526 -10.42874 -9.89335 -9.62381 -9.31807 -8.74944 -8.66943 -8.10028 -6.65550 -4.17845 0.60041 0.95491 1.82039 2.97550 3.13506 3.18291 3.20684 3.68791 4.01704 4.05459 4.08552 4.33011 4.47390 4.52976 4.73003 4.84272 5.06967 5.27452 5.43571 5.58190 5.67418 5.81291 6.34862 6.51577 6.61115 7.26918 7.53659 7.77907 8.13425 8.81302 8.96732 9.08408 9.57569 10.36681 Molecular weight = 283.03amu Principal moments of inertia in cm(-1) A = 0.019840 B = 0.007253 C = 0.005507 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1410.916276 B = 3859.488092 C = 5083.417294 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.487 5.487 2 C 0.276 3.724 3 C 0.228 3.772 4 N -0.401 5.401 5 C -0.303 4.303 6 H 0.113 0.887 7 C 0.035 3.965 8 N -0.858 5.858 9 Si 0.939 3.061 10 H -0.274 1.274 11 H -0.279 1.279 12 H -0.264 1.264 13 C 0.479 3.521 14 O -0.560 6.560 15 C 0.097 3.903 16 N -0.434 5.434 17 C 0.162 3.838 18 Cl -0.026 7.026 19 C -0.131 4.131 20 C -0.105 4.105 21 C 0.096 3.904 22 F -0.103 7.103 23 H 0.099 0.901 24 H 0.115 0.885 25 H 0.280 0.720 26 H 0.152 0.848 27 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.005 -12.317 0.073 12.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.167 5.167 2 C -0.041 4.041 3 C 0.101 3.899 4 N -0.118 5.118 5 C -0.430 4.430 6 H 0.130 0.870 7 C -0.172 4.172 8 N -0.494 5.494 9 Si 0.764 3.236 10 H -0.200 1.200 11 H -0.205 1.205 12 H -0.189 1.189 13 C 0.267 3.733 14 O -0.443 6.443 15 C -0.043 4.043 16 N -0.149 5.149 17 C -0.005 4.005 18 Cl 0.002 6.998 19 C -0.153 4.153 20 C -0.132 4.132 21 C 0.072 3.928 22 F -0.081 7.081 23 H 0.116 0.884 24 H 0.132 0.868 25 H 0.091 0.909 26 H 0.169 0.831 27 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 0.311 -11.400 0.525 11.416 hybrid contribution 0.551 0.288 -0.469 0.778 sum 0.861 -11.112 0.057 11.145 Atomic orbital electron populations 1.80818 1.13540 1.13602 1.08750 1.28558 0.94711 0.88612 0.92254 1.18938 0.82651 0.98867 0.89420 1.43528 1.52121 1.09929 1.06192 1.19905 1.22355 0.81633 1.19151 0.86967 1.25576 0.94614 1.00818 0.96190 1.69747 1.19022 1.37116 1.23540 0.85721 0.79656 0.80417 0.77807 1.19991 1.20460 1.18853 1.17368 0.87521 0.83866 0.84521 1.90720 1.49713 1.72807 1.31056 1.21940 0.97337 0.96435 0.88588 1.67714 1.08550 1.13860 1.24729 1.21778 0.97364 0.91265 0.90043 1.98410 1.75268 1.88265 1.37815 1.21712 1.00587 1.01142 0.91876 1.21546 0.97794 0.94409 0.99419 1.18585 0.96037 0.92721 0.85462 1.91610 1.77229 1.89023 1.50250 0.88378 0.86752 0.90932 0.83056 0.82514 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.49 -12.06 18.54 42.15 0.78 -11.28 15 2 C 0.28 6.46 11.25 -20.76 -0.23 6.23 15 3 C 0.23 4.90 4.75 -6.83 -0.03 4.87 15 4 N -0.40 -9.73 2.59 -119.01 -0.31 -10.04 15 5 C -0.30 -7.69 9.22 -15.02 -0.14 -7.83 15 6 H 0.11 2.93 7.44 -52.49 -0.39 2.54 15 7 C 0.03 0.85 5.06 -17.45 -0.09 0.76 15 8 N -0.86 -21.40 9.29 55.50 0.52 -20.89 15 9 Si 0.94 19.09 29.57 -169.99 -5.03 14.07 15 10 H -0.27 -5.74 7.11 56.52 0.40 -5.34 15 11 H -0.28 -5.56 7.11 56.52 0.40 -5.16 15 12 H -0.26 -5.26 7.11 56.52 0.40 -4.86 15 13 C 0.48 11.56 7.52 -12.33 -0.09 11.46 15 14 O -0.56 -15.00 15.06 5.29 0.08 -14.92 15 15 C 0.10 1.94 6.55 -82.96 -0.54 1.39 15 16 N -0.43 -8.04 4.63 -6.91 -0.03 -8.07 15 17 C 0.16 2.46 7.27 -17.46 -0.13 2.33 15 18 Cl -0.03 -0.36 29.10 -51.86 -1.51 -1.87 15 19 C -0.13 -1.56 9.88 -39.29 -0.39 -1.94 15 20 C -0.11 -1.30 10.16 -39.25 -0.40 -1.70 15 21 C 0.10 1.64 7.31 -38.81 -0.28 1.36 15 22 F -0.10 -1.94 15.57 2.25 0.04 -1.90 15 23 H 0.10 1.86 5.90 -51.93 -0.31 1.55 15 24 H 0.11 2.44 6.67 -51.93 -0.35 2.10 15 25 H 0.28 6.71 8.31 -40.82 -0.34 6.37 15 26 H 0.15 1.23 8.06 -52.49 -0.42 0.81 15 27 H 0.16 1.34 8.06 -52.49 -0.42 0.92 15 LS Contribution 269.06 15.07 4.05 4.05 Total: -1.00 -30.24 269.06 -4.76 -34.99 By element: Atomic # 1 Polarization: -0.04 SS G_CDS: -1.02 Total: -1.07 kcal Atomic # 6 Polarization: 19.25 SS G_CDS: -2.33 Total: 16.93 kcal Atomic # 7 Polarization: -51.23 SS G_CDS: 0.96 Total: -50.28 kcal Atomic # 8 Polarization: -15.00 SS G_CDS: 0.08 Total: -14.92 kcal Atomic # 9 Polarization: -1.94 SS G_CDS: 0.04 Total: -1.90 kcal Atomic # 14 Polarization: 19.09 SS G_CDS: -5.03 Total: 14.07 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -1.51 Total: -1.87 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -30.24 -4.76 -34.99 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000758938731.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.803 kcal (2) G-P(sol) polarization free energy of solvation -30.237 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.567 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.758 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.995 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds