Wall clock time and date at job start Tue Mar 31 2020 05:40:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 O 1.21287 * 120.00107 * 2 1 4 4 N 1.34782 * 120.00384 * 179.97438 * 2 1 3 5 5 C 1.40002 * 120.00035 * 185.27562 * 4 2 1 6 6 C 1.39038 * 119.97201 * 213.26595 * 5 4 2 7 7 C 1.38174 * 120.26320 * 180.02562 * 6 5 4 8 8 C 1.38159 * 120.21586 * 359.97438 * 7 6 5 9 9 Cl 1.73601 * 120.02556 * 179.97438 * 8 7 6 10 10 C 1.39791 * 119.95179 * 0.02562 * 8 7 6 11 11 C 1.47604 * 120.13387 * 179.97438 * 10 8 7 12 12 O 1.21516 * 119.99736 * 359.72056 * 11 10 8 13 13 O 1.34737 * 119.99951 * 179.97438 * 11 10 8 14 14 C 1.34852 * 116.99967 * 180.02562 * 13 11 10 15 15 H 1.08003 * 120.00042 * 359.97438 * 14 13 11 16 16 C 1.38813 * 120.00020 * 180.02562 * 14 13 11 17 17 N 1.31417 * 120.00013 * 359.97438 * 16 14 13 18 18 Si 1.86804 * 119.99714 * 179.97438 * 16 14 13 19 19 H 1.48493 * 109.47199 * 359.97438 * 18 16 14 20 20 H 1.48501 * 109.46979 * 120.00251 * 18 16 14 21 21 H 1.48502 * 109.46903 * 239.99963 * 18 16 14 22 22 C 1.38515 * 119.97726 * 33.51999 * 5 4 2 23 23 H 1.09005 * 109.46675 * 239.99938 * 1 2 3 24 24 H 1.08994 * 109.47109 * 0.02562 * 1 2 3 25 25 H 1.08994 * 109.46929 * 120.00779 * 1 2 3 26 26 H 0.96999 * 119.99300 * 5.27381 * 4 2 1 27 27 H 1.07994 * 119.86822 * 0.02562 * 6 5 4 28 28 H 1.07995 * 119.89359 * 179.97438 * 7 6 5 29 29 H 0.97001 * 119.99829 * 179.97438 * 17 16 14 30 30 H 1.07996 * 120.11111 * 0.02562 * 22 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1135 1.0504 0.0000 4 7 2.1810 -1.1672 0.0005 5 6 3.5766 -1.1696 0.1120 6 6 4.3235 -2.1468 -0.5364 7 6 5.7011 -2.1552 -0.4301 8 6 6.3463 -1.1919 0.3213 9 17 8.0773 -1.2075 0.4521 10 6 5.6042 -0.2052 0.9770 11 6 6.2894 0.8255 1.7812 12 8 7.5006 0.8145 1.8784 13 8 5.5715 1.7755 2.4117 14 6 6.2590 2.6872 3.1290 15 1 7.3366 2.6341 3.1790 16 6 5.5817 3.6934 3.8042 17 7 4.2705 3.7577 3.7438 18 14 6.5341 4.9559 4.7985 19 1 7.9873 4.6645 4.7064 20 1 6.2659 6.3139 4.2609 21 1 6.1060 4.8923 6.2190 22 6 4.2118 -0.2017 0.8725 23 1 -0.3633 -0.5139 0.8900 24 1 -0.3633 1.0276 -0.0005 25 1 -0.3633 -0.5139 -0.8899 26 1 1.6990 -2.0055 -0.0763 27 1 3.8249 -2.9022 -1.1255 28 1 6.2753 -2.9172 -0.9359 29 1 3.7972 4.4606 4.2159 30 1 3.6323 0.5550 1.3802 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000768098812.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:40:04 Heat of formation + Delta-G solvation = -82.784400 kcal Electronic energy + Delta-G solvation = -19473.837544 eV Core-core repulsion = 16068.071752 eV Total energy + Delta-G solvation = -3405.765792 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.044 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -40.44544 -39.07615 -37.94084 -36.03692 -35.03413 -34.41697 -32.17302 -31.08467 -30.72294 -28.29665 -25.63913 -23.68236 -22.76633 -20.70244 -20.10051 -17.92636 -17.62887 -16.85236 -16.38581 -16.05248 -15.49962 -14.67807 -14.59404 -14.51480 -14.15173 -13.91922 -13.49581 -13.07292 -12.75419 -12.59477 -12.36237 -11.98397 -11.80278 -11.52426 -11.24957 -11.18118 -10.61288 -10.39102 -10.35904 -10.02011 -9.80241 -9.73927 -8.78682 -8.66416 -8.54950 -7.91234 -6.40209 -4.01687 1.00113 1.38201 2.57264 2.60789 3.03867 3.14654 3.21432 3.29549 3.45220 3.93936 4.25989 4.48501 4.68041 4.92757 5.09657 5.10463 5.19951 5.22582 5.44225 5.52365 5.68950 5.86364 6.05615 6.25226 6.34978 6.51037 6.91925 7.02812 7.35258 7.42100 7.97224 8.14756 8.76576 9.07361 9.89427 10.76929 Molecular weight = 283.04amu Principal moments of inertia in cm(-1) A = 0.012760 B = 0.006966 C = 0.004565 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2193.752822 B = 4018.357769 C = 6131.614328 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C 0.500 3.500 3 O -0.503 6.503 4 N -0.677 5.677 5 C 0.134 3.866 6 C -0.126 4.126 7 C -0.106 4.106 8 C -0.012 4.012 9 Cl -0.039 7.039 10 C -0.060 4.060 11 C 0.424 3.576 12 O -0.530 6.530 13 O -0.202 6.202 14 C -0.370 4.370 15 H 0.099 0.901 16 C 0.040 3.960 17 N -0.853 5.853 18 Si 0.944 3.056 19 H -0.264 1.264 20 H -0.276 1.276 21 H -0.276 1.276 22 C -0.066 4.066 23 H 0.091 0.909 24 H 0.097 0.903 25 H 0.087 0.913 26 H 0.409 0.591 27 H 0.133 0.867 28 H 0.139 0.861 29 H 0.270 0.730 30 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.609 -13.244 -8.214 17.343 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.288 3.712 3 O -0.375 6.375 4 N -0.324 5.324 5 C 0.040 3.960 6 C -0.147 4.147 7 C -0.125 4.125 8 C -0.040 4.040 9 Cl -0.009 7.009 10 C -0.063 4.063 11 C 0.272 3.728 12 O -0.428 6.428 13 O -0.109 6.109 14 C -0.446 4.446 15 H 0.117 0.883 16 C -0.165 4.165 17 N -0.490 5.490 18 Si 0.769 3.231 19 H -0.188 1.188 20 H -0.201 1.201 21 H -0.202 1.202 22 C -0.087 4.087 23 H 0.110 0.890 24 H 0.115 0.885 25 H 0.106 0.894 26 H 0.245 0.755 27 H 0.151 0.849 28 H 0.156 0.844 29 H 0.080 0.920 30 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -6.969 -12.272 -8.059 16.252 hybrid contribution 0.197 0.119 0.400 0.461 sum -6.772 -12.153 -7.660 15.882 Atomic orbital electron populations 1.21904 0.90718 1.06109 1.04203 1.21087 0.90976 0.83280 0.75848 1.90899 1.70240 1.30872 1.45501 1.43565 1.04853 1.09916 1.74020 1.17661 0.83078 0.97609 0.97631 1.20824 0.93201 1.00148 1.00544 1.20668 0.93763 0.98464 0.99629 1.20950 0.86352 0.96651 1.00034 1.98384 1.07965 1.97867 1.96706 1.19153 0.92706 0.95310 0.99106 1.20445 0.86045 0.83622 0.82716 1.90718 1.14328 1.74865 1.62859 1.83907 1.39406 1.34014 1.53540 1.21386 0.92702 1.04755 1.25715 0.88298 1.25406 0.95924 0.97762 0.97416 1.70018 1.06638 1.32419 1.39877 0.85591 0.79562 0.79278 0.78715 1.18806 1.20111 1.20151 1.21587 0.93173 0.98367 0.95527 0.89050 0.88454 0.89412 0.75488 0.84913 0.84358 0.92021 0.82264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.38 10.32 36.01 0.37 -1.01 16 2 C 0.50 6.82 7.67 -10.98 -0.08 6.74 16 3 O -0.50 -10.07 14.78 5.55 0.08 -9.99 16 4 N -0.68 -7.78 5.34 -9.89 -0.05 -7.83 16 5 C 0.13 2.03 6.27 -83.73 -0.53 1.50 16 6 C -0.13 -1.56 9.95 -39.31 -0.39 -1.95 16 7 C -0.11 -1.47 9.81 -39.63 -0.39 -1.86 16 8 C -0.01 -0.22 6.35 -39.03 -0.25 -0.47 16 9 Cl -0.04 -0.73 26.01 -51.86 -1.35 -2.08 16 10 C -0.06 -1.32 5.87 -104.97 -0.62 -1.94 16 11 C 0.42 11.46 7.83 34.55 0.27 11.73 16 12 O -0.53 -14.85 13.21 -19.28 -0.25 -15.11 16 13 O -0.20 -6.10 8.99 -21.65 -0.19 -6.30 16 14 C -0.37 -11.29 9.65 30.94 0.30 -10.99 16 15 H 0.10 3.02 6.86 -52.48 -0.36 2.66 16 16 C 0.04 1.15 5.50 -17.52 -0.10 1.06 16 17 N -0.85 -25.60 13.67 55.49 0.76 -24.85 16 18 Si 0.94 21.78 29.55 -169.99 -5.02 16.76 16 19 H -0.26 -6.00 7.11 56.52 0.40 -5.60 16 20 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 21 H -0.28 -6.12 7.11 56.52 0.40 -5.72 16 22 C -0.07 -1.34 8.22 -38.96 -0.32 -1.66 16 23 H 0.09 0.56 8.14 -51.93 -0.42 0.14 16 24 H 0.10 0.88 8.12 -51.93 -0.42 0.45 16 25 H 0.09 0.45 8.14 -51.93 -0.42 0.03 16 26 H 0.41 2.73 8.82 -40.82 -0.36 2.37 16 27 H 0.13 1.08 8.06 -52.49 -0.42 0.65 16 28 H 0.14 1.48 8.06 -52.49 -0.42 1.06 16 29 H 0.27 7.37 8.31 -40.82 -0.34 7.04 16 30 H 0.16 3.75 5.97 -52.49 -0.31 3.43 16 LS Contribution 290.79 15.07 4.38 4.38 Total: -1.00 -37.43 290.79 -5.66 -43.09 By element: Atomic # 1 Polarization: 3.04 SS G_CDS: -2.28 Total: 0.76 kcal Atomic # 6 Polarization: 2.89 SS G_CDS: -1.73 Total: 1.16 kcal Atomic # 7 Polarization: -33.38 SS G_CDS: 0.71 Total: -32.68 kcal Atomic # 8 Polarization: -31.03 SS G_CDS: -0.37 Total: -31.39 kcal Atomic # 14 Polarization: 21.78 SS G_CDS: -5.02 Total: 16.76 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.35 Total: -2.08 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -37.43 -5.66 -43.09 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000768098812.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.695 kcal (2) G-P(sol) polarization free energy of solvation -37.428 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.662 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.090 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.784 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds