Wall clock time and date at job start Tue Mar 31 2020 05:41:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34716 * 116.99831 * 2 1 4 4 O 1.21483 * 120.00198 * 0.02562 * 3 2 1 5 5 C 1.47682 * 120.00201 * 179.97438 * 3 2 1 6 6 C 1.39832 * 120.05488 * 359.97438 * 5 3 2 7 7 C 1.37959 * 120.17702 * 180.02562 * 6 5 3 8 8 C 1.38295 * 120.29092 * 359.97438 * 7 6 5 9 9 Cl 1.73603 * 119.94044 * 180.27432 * 8 7 6 10 10 C 1.39905 * 120.11443 * 359.97438 * 8 7 6 11 11 C 1.47676 * 120.08435 * 180.02562 * 10 8 7 12 12 O 1.21596 * 120.00542 * 359.97438 * 11 10 8 13 13 N 1.34777 * 119.99523 * 180.02562 * 11 10 8 14 14 C 1.36882 * 119.99893 * 179.97438 * 13 11 10 15 15 H 1.07996 * 120.00142 * 0.02562 * 14 13 11 16 16 C 1.39048 * 120.00082 * 179.97438 * 14 13 11 17 17 N 1.31365 * 119.99986 * 0.02562 * 16 14 13 18 18 Si 1.86802 * 119.99985 * 180.02562 * 16 14 13 19 19 H 1.48501 * 109.47006 * 359.97438 * 18 16 14 20 20 H 1.48497 * 109.46995 * 120.00246 * 18 16 14 21 21 H 1.48502 * 109.46707 * 240.00297 * 18 16 14 22 22 C 1.39336 * 120.05994 * 180.02562 * 5 3 2 23 23 H 1.09003 * 109.46624 * 60.00130 * 1 2 3 24 24 H 1.08995 * 109.46834 * 179.97438 * 1 2 3 25 25 H 1.08996 * 109.47010 * 299.99989 * 1 2 3 26 26 H 1.07998 * 119.91418 * 0.02562 * 6 5 3 27 27 H 1.07999 * 119.85110 * 179.97438 * 7 6 5 28 28 H 0.96996 * 120.00256 * 359.97438 * 13 11 10 29 29 H 0.96993 * 120.00292 * 180.02562 * 17 16 14 30 30 H 1.08001 * 120.14230 * 359.97438 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0636 1.2004 0.0000 4 8 1.4020 2.2192 0.0005 5 6 3.5384 1.2777 0.0006 6 6 4.3012 0.1058 0.0017 7 6 5.6790 0.1751 0.0027 8 6 6.3157 1.4028 0.0022 9 17 8.0500 1.4795 -0.0036 10 6 5.5644 2.5831 0.0000 11 6 6.2450 3.8937 -0.0011 12 8 7.4597 3.9482 0.0003 13 7 5.5195 5.0296 -0.0027 14 6 6.1502 6.2445 -0.0032 15 1 7.2291 6.2928 -0.0027 16 6 5.4018 7.4164 -0.0053 17 7 4.0895 7.3576 -0.0063 18 14 6.2625 9.0743 -0.0068 19 1 7.7332 8.8684 -0.0046 20 1 5.8703 9.8345 -1.2205 21 1 5.8683 9.8376 1.2045 22 6 4.1722 2.5186 0.0011 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 3.8104 -0.8562 0.0017 27 1 6.2630 -0.7333 0.0040 28 1 4.5505 4.9862 -0.0034 29 1 3.5674 8.1750 -0.0082 30 1 3.5871 3.4264 0.0007 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000810560675.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:41:03 Heat of formation + Delta-G solvation = -93.651704 kcal Electronic energy + Delta-G solvation = -19193.147589 eV Core-core repulsion = 15786.910556 eV Total energy + Delta-G solvation = -3406.237033 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.044 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -40.56027 -39.21639 -37.44123 -36.45312 -35.94195 -34.10431 -31.80567 -31.15070 -30.68543 -27.79640 -25.44972 -23.83466 -23.25726 -21.08106 -19.74523 -18.41547 -17.60026 -17.08347 -16.38737 -16.28094 -15.83268 -15.05842 -14.68560 -14.13155 -14.03462 -13.80399 -13.70870 -13.36992 -12.86371 -12.54396 -12.30108 -12.02841 -11.71150 -11.47725 -11.19342 -11.14520 -10.87992 -10.61215 -10.53902 -10.36411 -10.34516 -9.68116 -8.93942 -8.61619 -8.28072 -8.12010 -6.60751 -3.91636 0.59551 1.14785 2.43400 2.47923 2.62052 3.10868 3.20380 3.27638 3.50412 4.03887 4.30565 4.62199 4.65464 4.85211 4.97813 5.05711 5.06845 5.22904 5.30905 5.37680 5.50201 5.78677 5.98227 6.00713 6.19518 6.34251 6.45516 6.67811 7.38500 7.71934 7.89264 8.44062 9.00834 9.34575 9.91113 10.55406 Molecular weight = 283.04amu Principal moments of inertia in cm(-1) A = 0.014222 B = 0.005786 C = 0.004122 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1968.267368 B = 4837.697546 C = 6790.818033 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.357 6.357 3 C 0.509 3.491 4 O -0.497 6.497 5 C -0.131 4.131 6 C -0.057 4.057 7 C -0.133 4.133 8 C 0.029 3.971 9 Cl -0.026 7.026 10 C -0.099 4.099 11 C 0.457 3.543 12 O -0.573 6.573 13 N -0.539 5.539 14 C -0.289 4.289 15 H 0.112 0.888 16 C 0.023 3.977 17 N -0.882 5.882 18 Si 0.936 3.064 19 H -0.265 1.265 20 H -0.279 1.279 21 H -0.279 1.279 22 C -0.030 4.030 23 H 0.063 0.937 24 H 0.101 0.899 25 H 0.064 0.936 26 H 0.144 0.856 27 H 0.141 0.859 28 H 0.393 0.607 29 H 0.277 0.723 30 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.980 -15.109 0.005 15.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.274 6.274 3 C 0.354 3.646 4 O -0.385 6.385 5 C -0.133 4.133 6 C -0.076 4.076 7 C -0.151 4.151 8 C 0.000 4.000 9 Cl 0.003 6.997 10 C -0.103 4.103 11 C 0.245 3.755 12 O -0.458 6.458 13 N -0.173 5.173 14 C -0.419 4.419 15 H 0.129 0.871 16 C -0.181 4.181 17 N -0.521 5.521 18 Si 0.762 3.238 19 H -0.189 1.189 20 H -0.205 1.205 21 H -0.205 1.205 22 C -0.050 4.050 23 H 0.082 0.918 24 H 0.119 0.881 25 H 0.082 0.918 26 H 0.161 0.839 27 H 0.159 0.841 28 H 0.228 0.772 29 H 0.087 0.913 30 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -4.388 -14.543 0.006 15.191 hybrid contribution -0.514 0.853 -0.002 0.996 sum -4.902 -13.691 0.004 14.542 Atomic orbital electron populations 1.23270 0.76081 1.03563 1.02795 1.86525 1.23475 1.32752 1.84648 1.21165 0.89024 0.81460 0.72940 1.90890 1.66604 1.35848 1.45123 1.18971 0.88975 0.94763 1.10543 1.21336 0.92908 0.97889 0.95488 1.20953 0.94351 0.96389 1.03454 1.21292 0.86903 0.93485 0.98299 1.98404 1.06925 1.98638 1.95695 1.20201 0.92359 0.95293 1.02475 1.17400 0.87541 0.82870 0.87702 1.90708 1.12287 1.86145 1.56698 1.41967 1.09379 1.04949 1.60996 1.19930 0.94248 0.81510 1.46194 0.87063 1.25446 0.95471 1.00494 0.96705 1.69608 1.04804 1.30306 1.47409 0.85700 0.79698 0.80494 0.77938 1.18869 1.20462 1.20467 1.21517 0.93179 0.97417 0.92902 0.91775 0.88088 0.91768 0.83864 0.84103 0.77180 0.91273 0.83327 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.33 10.57 101.05 1.07 1.39 16 2 O -0.36 -4.30 9.80 -40.54 -0.40 -4.70 16 3 C 0.51 7.68 7.89 34.59 0.27 7.95 16 4 O -0.50 -8.93 16.13 -19.25 -0.31 -9.24 16 5 C -0.13 -1.99 5.87 -105.04 -0.62 -2.61 16 6 C -0.06 -0.71 9.61 -39.09 -0.38 -1.08 16 7 C -0.13 -1.75 9.80 -39.66 -0.39 -2.14 16 8 C 0.03 0.51 6.36 -38.94 -0.25 0.26 16 9 Cl -0.03 -0.47 25.99 -51.86 -1.35 -1.82 16 10 C -0.10 -1.95 5.87 -105.00 -0.62 -2.57 16 11 C 0.46 11.10 7.71 -12.41 -0.10 11.00 16 12 O -0.57 -15.23 13.52 5.28 0.07 -15.16 16 13 N -0.54 -13.76 5.23 -11.88 -0.06 -13.82 16 14 C -0.29 -7.89 9.68 -15.00 -0.15 -8.04 16 15 H 0.11 3.15 7.15 -52.49 -0.38 2.77 16 16 C 0.02 0.60 5.50 -17.45 -0.10 0.51 16 17 N -0.88 -23.59 13.05 55.50 0.72 -22.86 16 18 Si 0.94 20.42 29.55 -169.99 -5.02 15.40 16 19 H -0.26 -5.76 7.11 56.52 0.40 -5.36 16 20 H -0.28 -5.99 7.11 56.52 0.40 -5.59 16 21 H -0.28 -6.00 7.11 56.52 0.40 -5.59 16 22 C -0.03 -0.54 9.08 -38.75 -0.35 -0.89 16 23 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 24 H 0.10 0.56 8.14 -51.93 -0.42 0.13 16 25 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 26 H 0.14 1.35 7.60 -52.49 -0.40 0.95 16 27 H 0.14 1.42 8.06 -52.49 -0.42 0.99 16 28 H 0.39 9.71 5.92 -40.82 -0.24 9.47 16 29 H 0.28 6.94 8.31 -40.82 -0.34 6.60 16 30 H 0.15 2.82 5.98 -52.49 -0.31 2.51 16 LS Contribution 289.96 15.07 4.37 4.37 Total: -1.00 -31.15 289.96 -5.72 -36.87 By element: Atomic # 1 Polarization: 9.33 SS G_CDS: -2.15 Total: 7.18 kcal Atomic # 6 Polarization: 5.38 SS G_CDS: -1.59 Total: 3.79 kcal Atomic # 7 Polarization: -37.35 SS G_CDS: 0.66 Total: -36.69 kcal Atomic # 8 Polarization: -28.47 SS G_CDS: -0.64 Total: -29.10 kcal Atomic # 14 Polarization: 20.42 SS G_CDS: -5.02 Total: 15.40 kcal Atomic # 17 Polarization: -0.47 SS G_CDS: -1.35 Total: -1.82 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -31.15 -5.72 -36.87 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000810560675.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.779 kcal (2) G-P(sol) polarization free energy of solvation -31.148 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.724 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.872 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.652 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds