Wall clock time and date at job start Tue Mar 31 2020 05:44:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 C 1.52997 * 109.47697 * 326.73149 * 3 2 1 5 5 N 1.46494 * 109.47372 * 180.02562 * 4 3 2 6 6 C 1.46500 * 119.99579 * 274.90687 * 5 4 3 7 7 C 1.50703 * 109.47367 * 263.59710 * 6 5 4 8 8 H 1.08002 * 119.99534 * 0.02562 * 7 6 5 9 9 C 1.37876 * 120.00168 * 179.97438 * 7 6 5 10 10 N 1.31508 * 119.99965 * 0.02562 * 9 7 6 11 11 Si 1.86808 * 119.99809 * 180.02562 * 9 7 6 12 12 H 1.48497 * 109.47302 * 60.00182 * 11 9 7 13 13 H 1.48501 * 109.46830 * 180.02562 * 11 9 7 14 14 H 1.48498 * 109.47059 * 299.99987 * 11 9 7 15 15 C 1.34772 * 120.00386 * 94.90961 * 5 4 3 16 16 O 1.21580 * 119.99724 * 4.33472 * 15 5 4 17 17 C 1.47520 * 119.99917 * 184.33201 * 15 5 4 18 18 C 1.36785 * 126.92492 * 174.06716 * 17 15 5 19 19 C 1.41415 * 103.83785 * 180.02562 * 18 17 15 20 20 Cl 1.73597 * 126.72330 * 180.02562 * 19 18 17 21 21 N 1.30219 * 106.54709 * 0.02562 * 19 18 17 22 22 O 1.20891 * 111.96581 * 359.69132 * 21 19 18 23 23 H 1.09013 * 109.46575 * 206.73409 * 3 2 1 24 24 H 1.08997 * 109.47440 * 86.73820 * 3 2 1 25 25 H 1.09003 * 109.46490 * 60.00097 * 4 3 2 26 26 H 1.09006 * 109.47003 * 300.00785 * 4 3 2 27 27 H 1.09001 * 109.47592 * 23.59699 * 6 5 4 28 28 H 1.09002 * 109.47137 * 143.60580 * 6 5 4 29 29 H 0.97007 * 119.99956 * 179.97438 * 10 9 7 30 30 H 1.08002 * 128.08419 * 359.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1186 -1.2051 0.7913 5 7 4.5836 -1.2041 0.7917 6 6 5.3168 -1.8061 -0.3246 7 6 5.7061 -3.2174 0.0329 8 1 5.4341 -3.6252 0.9952 9 6 6.4085 -3.9882 -0.8690 10 7 6.7392 -3.4918 -2.0410 11 14 6.8904 -5.7379 -0.4261 12 1 5.6672 -6.5335 -0.1503 13 1 7.6337 -6.3481 -1.5577 14 1 7.7539 -5.7227 0.7819 15 6 5.2568 -0.6494 1.8191 16 8 4.6509 -0.2206 2.7820 17 6 6.7288 -0.5626 1.7752 18 6 7.5421 0.0670 2.6770 19 6 8.8435 -0.1507 2.1683 20 17 10.3354 0.4013 2.8633 21 7 8.7033 -0.8463 1.0764 22 8 7.5429 -1.0908 0.8419 23 1 2.9708 0.9188 0.4624 24 1 2.9714 -0.0576 -1.0260 25 1 2.7557 -2.1231 0.3289 26 1 2.7552 -1.1468 1.8173 27 1 4.6832 -1.8176 -1.2115 28 1 6.2145 -1.2219 -0.5269 29 1 7.2337 -4.0340 -2.6754 30 1 7.2569 0.6053 3.5688 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000874151224.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:44:43 Heat of formation + Delta-G solvation = 56.863206 kcal Electronic energy + Delta-G solvation = -19651.507947 eV Core-core repulsion = 16284.090481 eV Total energy + Delta-G solvation = -3367.417466 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.051 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -44.76303 -39.49307 -36.98899 -36.81325 -35.57325 -33.33596 -33.01605 -32.08562 -30.78891 -27.40156 -25.19591 -23.49879 -23.18026 -22.33058 -19.97062 -17.83403 -17.53209 -17.25944 -16.44790 -16.19197 -15.85698 -15.11519 -14.69194 -14.49020 -14.27938 -13.70436 -13.46578 -13.12380 -12.57655 -12.57559 -12.40668 -12.32574 -12.12862 -11.83454 -11.45026 -11.10264 -10.90949 -10.84043 -10.75883 -10.27582 -10.00985 -9.85810 -9.81189 -9.49795 -8.61093 -8.18413 -6.24619 -4.32040 1.09360 1.59719 2.07150 2.71808 2.86393 2.95605 3.23001 3.28516 3.29997 3.35759 3.57258 4.19682 4.29115 4.51429 4.97376 4.99598 5.11742 5.15786 5.20709 5.29244 5.53674 5.82011 5.89982 6.08851 6.33395 7.02287 7.14058 7.61863 7.64868 7.78241 7.90811 8.17641 8.41566 8.72936 9.36286 10.82896 Molecular weight = 283.05amu Principal moments of inertia in cm(-1) A = 0.011071 B = 0.007094 C = 0.004661 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2528.482148 B = 3946.182140 C = 6006.257037 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.446 5.446 2 C 0.220 3.780 3 C -0.046 4.046 4 C 0.123 3.877 5 N -0.577 5.577 6 C 0.227 3.773 7 C -0.545 4.545 8 H 0.061 0.939 9 C 0.075 3.925 10 N -0.883 5.883 11 Si 0.893 3.107 12 H -0.275 1.275 13 H -0.285 1.285 14 H -0.276 1.276 15 C 0.603 3.397 16 O -0.539 6.539 17 C -0.047 4.047 18 C -0.160 4.160 19 C 0.036 3.964 20 Cl 0.013 6.987 21 N -0.334 5.334 22 O 0.195 5.805 23 H 0.110 0.890 24 H 0.116 0.884 25 H 0.095 0.905 26 H 0.091 0.909 27 H 0.050 0.950 28 H 0.052 0.948 29 H 0.267 0.733 30 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.846 7.345 5.197 9.185 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.123 5.123 2 C -0.098 4.098 3 C -0.087 4.087 4 C -0.002 4.002 5 N -0.306 5.306 6 C 0.108 3.892 7 C -0.584 4.584 8 H 0.079 0.921 9 C -0.129 4.129 10 N -0.520 5.520 11 Si 0.720 3.280 12 H -0.201 1.201 13 H -0.210 1.210 14 H -0.201 1.201 15 C 0.388 3.612 16 O -0.418 6.418 17 C -0.114 4.114 18 C -0.184 4.184 19 C -0.146 4.146 20 Cl 0.041 6.959 21 N -0.030 5.030 22 O 0.114 5.886 23 H 0.128 0.872 24 H 0.134 0.866 25 H 0.114 0.886 26 H 0.109 0.891 27 H 0.068 0.932 28 H 0.069 0.931 29 H 0.077 0.923 30 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges 0.982 7.086 4.669 8.543 hybrid contribution 0.838 -0.690 0.773 1.333 sum 1.820 6.397 5.442 8.593 Atomic orbital electron populations 1.81197 1.13038 1.08828 1.09265 1.29006 0.95021 0.92996 0.92780 1.19759 0.81538 1.02442 1.04993 1.21268 0.80113 0.97114 1.01692 1.48184 1.06008 1.54194 1.22236 1.19861 0.92219 0.93785 0.83327 1.21285 1.37372 0.97316 1.02380 0.92057 1.24821 0.95010 0.98415 0.94676 1.69873 1.38170 1.37241 1.06674 0.86630 0.78833 0.84289 0.78224 1.20080 1.21028 1.20117 1.16543 0.82593 0.78828 0.83240 1.90799 1.66958 1.50810 1.33264 1.24083 0.94507 1.00504 0.92298 1.22547 0.88825 1.04456 1.02543 1.23938 0.90168 1.04428 0.96029 1.98376 1.28914 1.87224 1.81375 1.73929 1.00046 1.13469 1.15551 1.85674 1.09282 1.54065 1.39621 0.87219 0.86585 0.88636 0.89104 0.93218 0.93067 0.92296 0.79637 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -6.82 18.54 42.15 0.78 -6.04 16 2 C 0.22 2.79 15.43 -20.76 -0.32 2.47 16 3 C -0.05 -0.50 6.02 -29.52 -0.18 -0.68 16 4 C 0.12 1.68 5.42 -4.05 -0.02 1.65 16 5 N -0.58 -9.75 2.47 -176.30 -0.44 -10.19 16 6 C 0.23 4.58 4.79 -5.19 -0.02 4.55 16 7 C -0.55 -12.82 8.55 -34.44 -0.29 -13.12 16 8 H 0.06 1.48 7.81 -52.49 -0.41 1.07 16 9 C 0.08 1.87 5.46 -17.82 -0.10 1.77 16 10 N -0.88 -22.78 13.29 55.43 0.74 -22.04 16 11 Si 0.89 19.90 29.54 -169.99 -5.02 14.88 16 12 H -0.28 -6.06 7.11 56.52 0.40 -5.66 16 13 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 14 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 15 C 0.60 10.55 7.61 -12.48 -0.09 10.46 16 16 O -0.54 -9.82 16.40 5.29 0.09 -9.74 16 17 C -0.05 -0.83 6.87 -36.33 -0.25 -1.08 16 18 C -0.16 -2.43 10.96 -38.90 -0.43 -2.86 16 19 C 0.04 0.58 7.97 -17.03 -0.14 0.45 16 20 Cl 0.01 0.18 29.33 -51.86 -1.52 -1.35 16 21 N -0.33 -6.40 12.05 32.82 0.40 -6.00 16 22 O 0.19 3.86 7.38 15.54 0.11 3.98 16 23 H 0.11 1.07 8.14 -51.92 -0.42 0.65 16 24 H 0.12 1.13 8.14 -51.93 -0.42 0.71 16 25 H 0.10 1.29 8.11 -51.93 -0.42 0.87 16 26 H 0.09 1.24 7.23 -51.93 -0.38 0.87 16 27 H 0.05 1.01 8.02 -51.93 -0.42 0.59 16 28 H 0.05 1.10 5.40 -51.93 -0.28 0.82 16 29 H 0.27 6.69 8.31 -40.82 -0.34 6.35 16 30 H 0.19 2.28 8.06 -52.49 -0.42 1.86 16 LS Contribution 298.64 15.07 4.50 4.50 Total: -1.00 -27.53 298.64 -4.51 -32.04 By element: Atomic # 1 Polarization: -1.36 SS G_CDS: -2.31 Total: -3.66 kcal Atomic # 6 Polarization: 5.46 SS G_CDS: -1.84 Total: 3.62 kcal Atomic # 7 Polarization: -45.75 SS G_CDS: 1.48 Total: -44.27 kcal Atomic # 8 Polarization: -5.96 SS G_CDS: 0.20 Total: -5.76 kcal Atomic # 14 Polarization: 19.90 SS G_CDS: -5.02 Total: 14.88 kcal Atomic # 17 Polarization: 0.18 SS G_CDS: -1.52 Total: -1.35 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -27.53 -4.51 -32.04 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000874151224.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.907 kcal (2) G-P(sol) polarization free energy of solvation -27.531 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.044 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.863 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds