Wall clock time and date at job start Tue Mar 31 2020 06:11:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.40053 * 120.58390 * 149.98931 * 3 2 1 5 5 C 1.38435 * 118.36150 * 180.02562 * 4 3 2 6 6 F 1.35098 * 120.27737 * 179.97438 * 5 4 3 7 7 C 1.38721 * 119.44353 * 359.97438 * 5 4 3 8 8 Cl 1.73603 * 119.41911 * 180.02562 * 7 5 4 9 9 N 1.31997 * 121.16111 * 359.73667 * 7 5 4 10 10 C 1.32360 * 121.78790 * 0.53329 * 9 7 5 11 11 N 1.38512 * 119.79433 * 179.74774 * 10 9 7 12 12 C 1.46506 * 119.99808 * 359.73092 * 11 10 9 13 13 C 1.52999 * 109.46691 * 179.97438 * 12 11 10 14 14 C 1.53006 * 109.46626 * 179.97438 * 13 12 11 15 15 C 1.50699 * 109.46866 * 179.97438 * 14 13 12 16 16 H 1.08003 * 119.99963 * 359.97438 * 15 14 13 17 17 C 1.37874 * 120.00270 * 179.97438 * 15 14 13 18 18 N 1.31522 * 119.99835 * 0.02562 * 17 15 14 19 19 Si 1.86793 * 120.00496 * 179.97438 * 17 15 14 20 20 H 1.48504 * 109.47092 * 90.00048 * 19 17 15 21 21 H 1.48498 * 109.47340 * 210.00299 * 19 17 15 22 22 H 1.48501 * 109.47391 * 330.00372 * 19 17 15 23 23 H 1.07998 * 120.81818 * 359.97438 * 4 3 2 24 24 H 0.96999 * 120.00115 * 179.72059 * 11 10 9 25 25 H 1.08993 * 109.47068 * 59.99348 * 12 11 10 26 26 H 1.09000 * 109.46872 * 299.99559 * 12 11 10 27 27 H 1.08993 * 109.47839 * 59.99891 * 13 12 11 28 28 H 1.09000 * 109.47160 * 299.99453 * 13 12 11 29 29 H 1.09000 * 109.47050 * 299.99699 * 14 13 12 30 30 H 1.09001 * 109.46801 * 59.99811 * 14 13 12 31 31 H 0.96992 * 120.00038 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2801 1.0450 -0.6030 5 6 4.6635 0.9989 -0.5767 6 9 5.3889 1.9856 -1.1470 7 6 5.2985 -0.0690 0.0403 8 17 7.0333 -0.1259 0.0736 9 7 4.6069 -1.0398 0.6075 10 6 3.2834 -1.0461 0.6056 11 7 2.5992 -2.0886 1.2087 12 6 3.3406 -3.1826 1.8409 13 6 2.3544 -4.1947 2.4274 14 6 3.1287 -5.3377 3.0872 15 6 2.1575 -6.3343 3.6654 16 1 1.0943 -6.1688 3.5721 17 6 2.6260 -7.4574 4.3136 18 7 3.9208 -7.6586 4.4277 19 14 1.4222 -8.6924 5.0310 20 1 1.0999 -9.7206 4.0091 21 1 2.0318 -9.3467 6.2165 22 1 0.1776 -7.9917 5.4377 23 1 2.7628 1.8657 -1.0777 24 1 1.6292 -2.0941 1.2126 25 1 3.9681 -2.7834 2.6377 26 1 3.9672 -3.6745 1.0969 27 1 1.7266 -4.5940 1.6309 28 1 1.7282 -3.7026 3.1716 29 1 3.7547 -5.8297 2.3427 30 1 3.7568 -4.9387 3.8837 31 1 4.2504 -8.4488 4.8833 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001157638234.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:11:33 Heat of formation + Delta-G solvation = 5.178500 kcal Electronic energy + Delta-G solvation = -18327.390367 eV Core-core repulsion = 14970.104474 eV Total energy + Delta-G solvation = -3357.285893 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.058 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -49.16744 -40.84435 -37.40267 -36.76503 -36.43183 -33.78182 -33.05116 -31.82870 -29.61512 -26.64640 -25.35054 -23.78792 -22.47501 -20.67198 -19.68529 -18.31558 -17.96284 -16.74973 -16.38637 -16.37096 -15.24461 -15.19109 -14.98128 -14.50519 -14.35957 -13.98077 -13.68484 -13.58896 -13.45261 -12.74081 -12.57993 -12.37220 -11.88952 -11.74119 -11.65322 -10.97782 -10.86060 -10.63034 -10.45667 -10.24139 -10.11202 -9.81065 -9.56064 -9.19992 -8.42330 -8.03805 -6.07120 -4.10406 0.00170 0.68943 1.26299 2.24150 2.48647 2.83122 3.27877 3.32473 3.34606 3.37012 3.37658 3.66251 3.95082 4.39762 4.44535 4.60046 4.90689 5.13142 5.29001 5.47122 5.61226 5.77603 5.99974 6.41171 6.45033 6.63883 6.87085 6.89937 7.11419 7.55693 7.56610 7.67122 7.90801 8.31560 8.95860 9.54315 11.04050 Molecular weight = 283.06amu Principal moments of inertia in cm(-1) A = 0.021178 B = 0.003401 C = 0.002938 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1321.789026 B = 8230.941636 C = 9526.981011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C 0.259 3.741 3 C -0.135 4.135 4 C 0.003 3.997 5 C -0.012 4.012 6 F -0.120 7.120 7 C 0.235 3.765 8 Cl 0.000 7.000 9 N -0.505 5.505 10 C 0.464 3.536 11 N -0.692 5.692 12 C 0.118 3.882 13 C -0.125 4.125 14 C 0.026 3.974 15 C -0.525 4.525 16 H 0.055 0.945 17 C 0.058 3.942 18 N -0.893 5.893 19 Si 0.893 3.107 20 H -0.280 1.280 21 H -0.286 1.286 22 H -0.274 1.274 23 H 0.165 0.835 24 H 0.413 0.587 25 H 0.073 0.927 26 H 0.073 0.927 27 H 0.055 0.945 28 H 0.055 0.945 29 H 0.020 0.980 30 H 0.020 0.980 31 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.044 18.829 -10.896 21.966 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.079 5.079 2 C -0.057 4.057 3 C -0.147 4.147 4 C -0.026 4.026 5 C -0.038 4.038 6 F -0.099 7.099 7 C 0.064 3.936 8 Cl 0.029 6.971 9 N -0.225 5.225 10 C 0.221 3.779 11 N -0.318 5.318 12 C -0.004 4.004 13 C -0.163 4.163 14 C -0.011 4.011 15 C -0.563 4.563 16 H 0.073 0.927 17 C -0.143 4.143 18 N -0.532 5.532 19 Si 0.721 3.279 20 H -0.206 1.206 21 H -0.211 1.211 22 H -0.199 1.199 23 H 0.182 0.818 24 H 0.250 0.750 25 H 0.092 0.908 26 H 0.092 0.908 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.039 0.961 30 H 0.039 0.961 31 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 2.098 17.803 -10.288 20.668 hybrid contribution -0.584 -0.001 -0.014 0.584 sum 1.514 17.802 -10.302 20.624 Atomic orbital electron populations 1.81334 1.11370 1.06695 1.08522 1.25005 0.91809 0.94712 0.94159 1.15968 0.85809 0.99673 1.13280 1.21284 0.91173 0.96787 0.93327 1.17423 0.89142 0.90265 1.06983 1.91555 1.76758 1.58808 1.82755 1.21688 0.88937 0.89792 0.93141 1.98462 1.04450 1.97810 1.96388 1.66695 1.05876 1.26633 1.23260 1.17998 0.86585 0.86207 0.87079 1.45228 1.09144 1.21017 1.56389 1.21888 0.95379 0.85913 0.97190 1.21947 0.97984 0.96722 0.99635 1.19011 0.95385 0.91161 0.95567 1.21185 0.92990 1.06020 1.36097 0.92672 1.25012 0.95132 0.98068 0.96124 1.69957 1.12243 1.27942 1.43030 0.86584 0.81198 0.81426 0.78740 1.20622 1.21148 1.19887 0.81773 0.74962 0.90836 0.90841 0.92613 0.92606 0.96134 0.96130 0.92869 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -5.10 18.54 41.84 0.78 -4.32 16 2 C 0.26 2.75 14.12 -22.47 -0.32 2.44 16 3 C -0.13 -1.29 5.77 -106.44 -0.61 -1.91 16 4 C 0.00 0.02 9.88 -38.83 -0.38 -0.36 16 5 C -0.01 -0.11 7.29 -39.33 -0.29 -0.39 16 6 F -0.12 -1.09 16.83 2.25 0.04 -1.05 16 7 C 0.24 2.57 7.28 -17.30 -0.13 2.45 16 8 Cl 0.00 0.00 28.75 -51.86 -1.49 -1.49 16 9 N -0.51 -6.34 9.52 -9.22 -0.09 -6.42 16 10 C 0.46 5.45 7.49 -155.01 -1.16 4.29 16 11 N -0.69 -8.78 5.62 -60.18 -0.34 -9.11 16 12 C 0.12 1.81 5.68 -4.04 -0.02 1.79 16 13 C -0.12 -2.30 5.27 -26.73 -0.14 -2.44 16 14 C 0.03 0.64 4.97 -27.88 -0.14 0.50 16 15 C -0.52 -14.32 9.11 -34.44 -0.31 -14.64 16 16 H 0.06 1.46 7.74 -52.48 -0.41 1.06 16 17 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 18 N -0.89 -26.19 13.29 55.43 0.74 -25.45 16 19 Si 0.89 21.22 29.54 -169.99 -5.02 16.20 16 20 H -0.28 -6.58 7.11 56.52 0.40 -6.17 16 21 H -0.29 -6.74 7.11 56.52 0.40 -6.34 16 22 H -0.27 -6.39 7.11 56.52 0.40 -5.98 16 23 H 0.16 0.76 8.06 -52.49 -0.42 0.34 16 24 H 0.41 4.88 7.31 -40.82 -0.30 4.58 16 25 H 0.07 1.16 8.14 -51.93 -0.42 0.74 16 26 H 0.07 1.16 8.14 -51.93 -0.42 0.74 16 27 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16 28 H 0.06 1.01 8.14 -51.93 -0.42 0.58 16 29 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 30 H 0.02 0.53 8.14 -51.93 -0.42 0.10 16 31 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 LS Contribution 305.98 15.07 4.61 4.61 Total: -1.00 -29.38 305.98 -7.18 -36.56 By element: Atomic # 1 Polarization: 0.04 SS G_CDS: -2.80 Total: -2.76 kcal Atomic # 6 Polarization: -3.15 SS G_CDS: -3.60 Total: -6.75 kcal Atomic # 7 Polarization: -46.40 SS G_CDS: 1.09 Total: -45.31 kcal Atomic # 9 Polarization: -1.09 SS G_CDS: 0.04 Total: -1.05 kcal Atomic # 14 Polarization: 21.22 SS G_CDS: -5.02 Total: 16.20 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -1.49 Total: -1.49 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -29.38 -7.18 -36.56 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001157638234.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.734 kcal (2) G-P(sol) polarization free energy of solvation -29.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.356 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.178 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.556 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds