Wall clock time and date at job start Tue Mar 31 2020 05:53:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13594 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.39695 * 120.08731 * 9.64881 * 3 2 1 5 5 C 1.38131 * 120.07360 * 180.02562 * 4 3 2 6 6 Cl 1.73602 * 119.87148 * 179.97438 * 5 4 3 7 7 C 1.38280 * 120.25230 * 359.68568 * 5 4 3 8 8 C 1.39390 * 120.17134 * 0.59666 * 7 5 4 9 9 C 1.48431 * 120.03792 * 179.69765 * 8 7 5 10 10 C 1.39716 * 119.99662 * 179.70659 * 9 8 7 11 11 C 1.38392 * 120.37887 * 180.02562 * 10 9 8 12 12 C 1.37713 * 120.37904 * 359.97438 * 11 10 9 13 13 C 1.40749 * 119.98827 * 359.97438 * 12 11 10 14 14 C 1.41422 * 120.18872 * 180.02562 * 13 12 11 15 15 H 1.08002 * 120.00182 * 204.49049 * 14 13 12 16 16 C 1.39934 * 120.00226 * 24.49254 * 14 13 12 17 17 N 1.30834 * 119.99697 * 17.90510 * 16 14 13 18 18 Si 1.86796 * 120.00321 * 197.90229 * 16 14 13 19 19 H 1.48499 * 109.46876 * 60.00162 * 18 16 14 20 20 H 1.48503 * 109.47152 * 179.97438 * 18 16 14 21 21 H 1.48498 * 109.47272 * 300.00069 * 18 16 14 22 22 C 1.38720 * 119.99644 * 359.72396 * 9 8 7 23 23 C 1.39085 * 119.91845 * 359.42396 * 8 7 5 24 24 H 1.07995 * 119.96524 * 0.03018 * 4 3 2 25 25 H 1.07999 * 119.91379 * 180.31877 * 7 5 4 26 26 H 1.08005 * 119.80814 * 0.04132 * 10 9 8 27 27 H 1.07998 * 119.81255 * 180.02562 * 11 10 9 28 28 H 1.08001 * 120.00897 * 180.02562 * 12 11 10 29 29 H 0.96999 * 119.99944 * 179.97438 * 17 16 14 30 30 H 1.07999 * 120.18859 * 359.70743 * 22 9 8 31 31 H 1.08006 * 120.12038 * 180.29493 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2688 -1.1907 -0.2026 5 6 4.6501 -1.1898 -0.2020 6 17 5.5158 -2.6734 -0.4536 7 6 5.3460 -0.0108 -0.0077 8 6 4.6572 1.1829 0.2013 9 6 5.4072 2.4457 0.4162 10 6 4.7159 3.6427 0.6195 11 6 5.4072 4.8247 0.8201 12 6 6.7843 4.8344 0.8222 13 6 7.4965 3.6374 0.6200 14 6 8.9107 3.6424 0.6219 15 1 9.4542 2.8698 0.0982 16 6 9.6060 4.6483 1.3023 17 7 8.9956 5.3663 2.2098 18 14 11.4055 4.9659 0.9149 19 1 11.5456 5.3378 -0.5159 20 1 11.9067 6.0752 1.7655 21 1 12.1947 3.7376 1.1867 22 6 6.7944 2.4372 0.4149 23 6 3.2664 1.1902 0.2025 24 1 2.7301 -2.1134 -0.3599 25 1 6.4260 -0.0155 -0.0134 26 1 3.6359 3.6455 0.6203 27 1 4.8636 5.7447 0.9768 28 1 7.3177 5.7602 0.9798 29 1 9.4776 6.0633 2.6817 30 1 7.3317 1.5129 0.2624 31 1 2.7294 2.1141 0.3593 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001242567037.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:53:48 Heat of formation + Delta-G solvation = 56.054942 kcal Electronic energy + Delta-G solvation = -17721.554689 eV Core-core repulsion = 14764.951437 eV Total energy + Delta-G solvation = -2956.603252 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 283.046 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -39.68768 -37.57742 -36.78772 -36.14504 -33.95913 -32.04910 -31.20423 -29.95659 -28.19849 -25.57918 -23.99614 -23.04673 -20.92239 -20.40324 -18.66374 -16.96955 -16.62386 -15.73097 -15.38388 -15.01157 -14.68793 -14.24763 -13.90705 -13.33308 -13.25970 -13.09940 -13.00110 -12.83088 -12.43889 -12.00034 -11.84586 -11.62590 -11.46072 -11.18996 -11.08024 -10.95467 -10.70900 -10.57072 -9.91661 -9.55760 -9.40744 -9.07672 -8.82577 -7.66578 -7.24700 -6.88497 -4.50279 0.66051 1.00281 1.99615 2.50553 2.60766 2.69427 3.00839 3.02428 3.07739 3.20402 3.77890 3.84136 3.88225 4.53197 4.73071 4.99472 5.06022 5.25159 5.45599 5.53755 5.69455 6.00189 6.07300 6.18933 6.23971 6.34867 6.60988 6.75614 6.90467 7.06766 7.15933 7.35400 7.38207 7.62989 7.84252 7.87577 8.08620 8.45852 8.73873 8.77765 10.06433 Molecular weight = 283.05amu Principal moments of inertia in cm(-1) A = 0.019580 B = 0.004231 C = 0.003515 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1429.671595 B = 6616.231998 C = 7964.889533 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.422 5.422 2 C 0.264 3.736 3 C -0.018 4.018 4 C -0.086 4.086 5 C -0.031 4.031 6 Cl -0.067 7.067 7 C -0.082 4.082 8 C 0.008 3.992 9 C -0.049 4.049 10 C -0.218 4.218 11 C -0.107 4.107 12 C -0.149 4.149 13 C 0.107 3.893 14 C -0.463 4.463 15 H 0.079 0.921 16 C 0.077 3.923 17 N -0.792 5.792 18 Si 0.909 3.091 19 H -0.263 1.263 20 H -0.278 1.278 21 H -0.265 1.265 22 C -0.199 4.199 23 C -0.070 4.070 24 H 0.137 0.863 25 H 0.147 0.853 26 H 0.093 0.907 27 H 0.093 0.907 28 H 0.120 0.880 29 H 0.283 0.717 30 H 0.100 0.900 31 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.950 -7.859 -3.107 9.328 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.097 5.097 2 C -0.051 4.051 3 C -0.022 4.022 4 C -0.107 4.107 5 C -0.058 4.058 6 Cl -0.038 7.038 7 C -0.102 4.102 8 C 0.008 3.992 9 C -0.049 4.049 10 C -0.237 4.237 11 C -0.125 4.125 12 C -0.169 4.169 13 C 0.104 3.896 14 C -0.492 4.492 15 H 0.098 0.902 16 C -0.141 4.141 17 N -0.417 5.417 18 Si 0.733 3.267 19 H -0.187 1.187 20 H -0.203 1.203 21 H -0.189 1.189 22 C -0.218 4.218 23 C -0.090 4.090 24 H 0.155 0.845 25 H 0.164 0.836 26 H 0.111 0.889 27 H 0.111 0.889 28 H 0.138 0.862 29 H 0.094 0.906 30 H 0.118 0.882 31 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -5.590 -7.807 -2.942 10.042 hybrid contribution 1.348 0.082 -0.017 1.350 sum -4.242 -7.725 -2.960 9.297 Atomic orbital electron populations 1.81229 1.11952 1.07468 1.09088 1.25575 0.92466 0.93596 0.93479 1.15674 0.84245 0.94591 1.07676 1.20837 0.92079 0.97459 1.00315 1.20549 0.91763 0.87952 1.05496 1.98373 1.76711 1.33551 1.95198 1.21508 1.01644 0.89885 0.97118 1.18968 0.91858 0.93452 0.94920 1.18139 0.93066 0.89962 1.03731 1.20406 0.97115 0.92639 1.13536 1.20640 0.94865 0.96117 1.00900 1.21490 0.92381 0.98862 1.04126 1.17530 0.93369 0.90282 0.88370 1.19554 0.91296 1.09590 1.28786 0.90242 1.25904 1.00976 0.94443 0.92812 1.69797 1.38910 1.16911 1.16082 0.86355 0.81772 0.78888 0.79706 1.18743 1.20302 1.18909 1.21076 0.91694 0.97398 1.11647 1.21436 0.93859 0.96820 0.96886 0.84477 0.83579 0.88878 0.88926 0.86183 0.90634 0.88231 0.84099 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -6.22 18.54 41.83 0.78 -5.45 16 2 C 0.26 3.45 15.32 -22.47 -0.34 3.10 16 3 C -0.02 -0.23 5.73 -106.98 -0.61 -0.84 16 4 C -0.09 -0.98 9.52 -39.08 -0.37 -1.35 16 5 C -0.03 -0.39 6.31 -39.61 -0.25 -0.63 16 6 Cl -0.07 -0.77 28.94 -51.86 -1.50 -2.27 16 7 C -0.08 -1.18 9.20 -39.14 -0.36 -1.54 16 8 C 0.01 0.13 5.87 -104.95 -0.62 -0.48 16 9 C -0.05 -0.95 5.87 -104.97 -0.62 -1.57 16 10 C -0.22 -4.29 9.43 -38.97 -0.37 -4.65 16 11 C -0.11 -2.27 10.01 -39.72 -0.40 -2.67 16 12 C -0.15 -3.56 8.69 -38.83 -0.34 -3.90 16 13 C 0.11 2.60 5.57 -106.86 -0.60 2.01 16 14 C -0.46 -11.37 9.05 -37.74 -0.34 -11.71 16 15 H 0.08 1.86 7.91 -52.49 -0.42 1.45 16 16 C 0.08 1.81 5.14 -17.34 -0.09 1.72 16 17 N -0.79 -19.25 10.96 55.55 0.61 -18.64 16 18 Si 0.91 17.57 29.60 -169.99 -5.03 12.54 16 19 H -0.26 -5.06 7.11 56.52 0.40 -4.66 16 20 H -0.28 -5.27 7.11 56.52 0.40 -4.87 16 21 H -0.26 -5.07 7.11 56.52 0.40 -4.66 16 22 C -0.20 -4.31 9.17 -38.53 -0.35 -4.67 16 23 C -0.07 -0.96 9.13 -38.83 -0.35 -1.31 16 24 H 0.14 1.28 8.06 -52.49 -0.42 0.86 16 25 H 0.15 2.09 6.18 -52.49 -0.32 1.76 16 26 H 0.09 1.57 6.18 -52.48 -0.32 1.25 16 27 H 0.09 1.75 8.06 -52.49 -0.42 1.33 16 28 H 0.12 2.98 6.15 -52.49 -0.32 2.66 16 29 H 0.28 6.28 8.30 -40.82 -0.34 5.94 16 30 H 0.10 1.98 6.18 -52.49 -0.32 1.66 16 31 H 0.14 1.83 6.18 -52.48 -0.32 1.51 16 LS Contribution 296.54 15.07 4.47 4.47 Total: -1.00 -24.93 296.54 -8.70 -33.63 By element: Atomic # 1 Polarization: 6.23 SS G_CDS: -2.01 Total: 4.21 kcal Atomic # 6 Polarization: -22.49 SS G_CDS: -6.01 Total: -28.50 kcal Atomic # 7 Polarization: -25.47 SS G_CDS: 1.38 Total: -24.09 kcal Atomic # 14 Polarization: 17.57 SS G_CDS: -5.03 Total: 12.54 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.50 Total: -2.27 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -24.93 -8.70 -33.63 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001242567037.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.687 kcal (2) G-P(sol) polarization free energy of solvation -24.931 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.756 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.701 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.632 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.055 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds