Wall clock time and date at job start Tue Mar 31 2020 05:54:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43204 * 179.97438 * 2 1 4 4 C 1.39693 * 120.22531 * 333.97569 * 3 2 1 5 5 Cl 1.73599 * 120.03967 * 359.70345 * 4 3 2 6 6 C 1.38085 * 119.92393 * 179.97438 * 4 3 2 7 7 C 1.38460 * 120.39707 * 0.02562 * 6 4 3 8 8 C 1.38069 * 120.46218 * 359.97438 * 7 6 4 9 9 C 1.39164 * 120.05732 * 0.02562 * 8 7 6 10 10 C 1.48214 * 120.19539 * 180.02562 * 9 8 7 11 11 C 1.39817 * 120.01059 * 129.97567 * 10 9 8 12 12 C 1.38361 * 120.37034 * 180.02562 * 11 10 9 13 13 C 1.37739 * 120.39033 * 359.97438 * 12 11 10 14 14 C 1.40750 * 120.00959 * 359.97438 * 13 12 11 15 15 C 1.41434 * 120.18373 * 179.97438 * 14 13 12 16 16 H 1.07999 * 119.99531 * 334.56805 * 15 14 13 17 17 C 1.39923 * 120.00049 * 154.56925 * 15 14 13 18 18 N 1.30833 * 120.00232 * 343.00147 * 17 15 14 19 19 Si 1.86807 * 119.99758 * 163.00781 * 17 15 14 20 20 H 1.48498 * 109.47410 * 59.99901 * 19 17 15 21 21 H 1.48505 * 109.47010 * 179.97438 * 19 17 15 22 22 H 1.48493 * 109.47090 * 299.99718 * 19 17 15 23 23 C 1.38841 * 120.00893 * 309.70666 * 10 9 8 24 24 H 1.07998 * 119.79998 * 179.97438 * 6 4 3 25 25 H 1.07999 * 119.76937 * 179.97438 * 7 6 4 26 26 H 1.07999 * 119.97138 * 180.02562 * 8 7 6 27 27 H 1.08005 * 119.81165 * 359.97438 * 11 10 9 28 28 H 1.08001 * 119.80303 * 179.97438 * 12 11 10 29 29 H 1.08001 * 119.98951 * 180.02562 * 13 12 11 30 30 H 0.97001 * 119.99957 * 179.97438 * 18 17 15 31 31 H 1.07998 * 120.19316 * 359.96948 * 23 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2718 -1.0837 0.5296 5 17 2.4113 -2.4352 1.1979 6 6 4.6526 -1.0768 0.5259 7 6 5.3464 0.0000 0.0003 8 6 4.6673 1.0802 -0.5272 9 6 3.2757 1.0932 -0.5333 10 6 2.5435 2.2509 -1.0994 11 6 1.5216 2.0444 -2.0309 12 6 0.8336 3.1197 -2.5645 13 6 1.1471 4.4058 -2.1838 14 6 2.1723 4.6323 -1.2463 15 6 2.4976 5.9514 -0.8532 16 1 2.2910 6.7788 -1.5158 17 6 3.0872 6.1843 0.3942 18 7 3.0384 5.2641 1.3230 19 14 3.9440 7.8093 0.7335 20 1 2.9725 8.9222 0.5824 21 1 4.4810 7.8061 2.1180 22 1 5.0591 7.9915 -0.2300 23 6 2.8685 3.5405 -0.7005 24 1 5.1946 -1.9160 0.9362 25 1 6.4264 -0.0050 0.0030 26 1 5.2164 1.9157 -0.9355 27 1 1.2684 1.0398 -2.3364 28 1 0.0461 2.9497 -3.2838 29 1 0.6057 5.2404 -2.6041 30 1 3.4474 5.4255 2.1876 31 1 3.6540 3.7037 0.0225 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001244724569.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:54:06 Heat of formation + Delta-G solvation = 56.626765 kcal Electronic energy + Delta-G solvation = -18347.191373 eV Core-core repulsion = 15390.612917 eV Total energy + Delta-G solvation = -2956.578456 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 283.046 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -39.58744 -37.44247 -36.43670 -35.97367 -33.83927 -32.09450 -31.01334 -29.68445 -28.36309 -25.40494 -23.80303 -22.91460 -20.92189 -20.20390 -18.66481 -17.38443 -16.17101 -15.59435 -15.28130 -14.83590 -14.63053 -14.13144 -13.94901 -13.36502 -13.06901 -12.76712 -12.54154 -12.51098 -12.34087 -11.88486 -11.70681 -11.45221 -11.35085 -11.19354 -11.10649 -10.96349 -10.71522 -10.54576 -9.80736 -9.68736 -9.31643 -8.84423 -8.70675 -7.54081 -7.42999 -6.85335 -4.47535 0.81733 1.18358 2.02038 2.64292 2.81542 3.01748 3.03782 3.09568 3.16504 3.24791 3.86064 4.02859 4.17108 4.48781 4.82003 5.05284 5.27122 5.35828 5.47247 5.63842 5.84799 6.07361 6.14368 6.33634 6.34074 6.48720 6.64789 6.81857 6.93484 7.06069 7.19172 7.38682 7.68557 7.84063 7.88720 7.91892 8.11771 8.45541 8.75971 8.79804 10.09329 Molecular weight = 283.05amu Principal moments of inertia in cm(-1) A = 0.019687 B = 0.005218 C = 0.004627 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1421.904590 B = 5364.915173 C = 6050.545868 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.407 5.407 2 C 0.263 3.737 3 C -0.022 4.022 4 C 0.006 3.994 5 Cl -0.065 7.065 6 C -0.130 4.130 7 C -0.079 4.079 8 C -0.110 4.110 9 C 0.057 3.943 10 C -0.071 4.071 11 C -0.215 4.215 12 C -0.092 4.092 13 C -0.212 4.212 14 C 0.106 3.894 15 C -0.462 4.462 16 H 0.079 0.921 17 C 0.076 3.924 18 N -0.793 5.793 19 Si 0.909 3.091 20 H -0.265 1.265 21 H -0.278 1.278 22 H -0.263 1.263 23 C -0.128 4.128 24 H 0.138 0.862 25 H 0.137 0.863 26 H 0.141 0.859 27 H 0.087 0.913 28 H 0.091 0.909 29 H 0.095 0.905 30 H 0.283 0.717 31 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.416 -8.989 -0.015 11.653 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.082 5.082 2 C -0.052 4.052 3 C -0.026 4.026 4 C -0.024 4.024 5 Cl -0.036 7.036 6 C -0.148 4.148 7 C -0.098 4.098 8 C -0.128 4.128 9 C 0.054 3.946 10 C -0.072 4.072 11 C -0.235 4.235 12 C -0.111 4.111 13 C -0.232 4.232 14 C 0.104 3.896 15 C -0.492 4.492 16 H 0.097 0.903 17 C -0.142 4.142 18 N -0.419 5.419 19 Si 0.733 3.267 20 H -0.190 1.190 21 H -0.203 1.203 22 H -0.187 1.187 23 C -0.147 4.147 24 H 0.156 0.844 25 H 0.155 0.845 26 H 0.159 0.841 27 H 0.105 0.895 28 H 0.110 0.890 29 H 0.113 0.887 30 H 0.094 0.906 31 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 5.624 -9.154 0.314 10.748 hybrid contribution 0.633 0.618 0.373 0.960 sum 6.256 -8.536 0.687 10.605 Atomic orbital electron populations 1.81107 1.11795 1.07368 1.07953 1.25090 0.92282 0.93763 0.94075 1.15939 0.85195 0.95607 1.05898 1.20816 0.92539 0.89037 0.99962 1.98375 1.77298 1.44080 1.83880 1.20872 0.90982 1.00315 1.02663 1.21227 1.00370 0.92461 0.95758 1.21407 0.92828 0.98924 0.99601 1.19150 0.92891 0.91209 0.91370 1.18386 0.97995 0.91399 0.99372 1.20315 1.01715 0.96847 1.04607 1.20446 0.98368 0.93171 0.99077 1.21105 1.01201 0.95067 1.05840 1.17532 0.88961 0.93309 0.89828 1.19542 1.35317 0.93449 1.00847 0.90261 1.25904 0.94072 0.98677 0.95518 1.69795 1.33476 1.34681 1.03910 0.86354 0.80355 0.81918 0.78074 1.18991 1.20272 1.18730 1.21429 1.01404 0.89555 1.02317 0.84430 0.84521 0.84105 0.89493 0.89042 0.88696 0.90618 0.85620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -8.57 18.54 41.84 0.78 -7.80 16 2 C 0.26 5.17 11.70 -22.47 -0.26 4.91 16 3 C -0.02 -0.39 5.74 -106.51 -0.61 -1.00 16 4 C 0.01 0.08 6.34 -39.09 -0.25 -0.17 16 5 Cl -0.07 -0.88 28.02 -51.86 -1.45 -2.34 16 6 C -0.13 -1.49 9.81 -39.56 -0.39 -1.88 16 7 C -0.08 -0.90 10.02 -39.56 -0.40 -1.29 16 8 C -0.11 -1.60 9.50 -39.30 -0.37 -1.98 16 9 C 0.06 1.03 5.49 -104.53 -0.57 0.45 16 10 C -0.07 -1.55 5.09 -104.98 -0.53 -2.09 16 11 C -0.22 -4.75 8.45 -38.95 -0.33 -5.08 16 12 C -0.09 -2.07 10.01 -39.72 -0.40 -2.47 16 13 C -0.21 -5.08 9.78 -38.82 -0.38 -5.46 16 14 C 0.11 2.70 5.57 -106.87 -0.59 2.10 16 15 C -0.46 -11.68 9.05 -37.74 -0.34 -12.03 16 16 H 0.08 1.93 7.90 -52.49 -0.41 1.51 16 17 C 0.08 1.82 5.15 -17.35 -0.09 1.73 16 18 N -0.79 -19.61 10.96 55.55 0.61 -19.00 16 19 Si 0.91 17.81 29.59 -169.99 -5.03 12.78 16 20 H -0.27 -5.20 7.11 56.52 0.40 -4.80 16 21 H -0.28 -5.32 7.11 56.52 0.40 -4.92 16 22 H -0.26 -5.07 7.11 56.52 0.40 -4.67 16 23 C -0.13 -3.08 8.15 -38.50 -0.31 -3.39 16 24 H 0.14 1.18 8.06 -52.49 -0.42 0.76 16 25 H 0.14 1.07 8.06 -52.49 -0.42 0.65 16 26 H 0.14 1.95 8.04 -52.49 -0.42 1.53 16 27 H 0.09 1.82 7.27 -52.48 -0.38 1.44 16 28 H 0.09 1.82 8.06 -52.49 -0.42 1.40 16 29 H 0.09 2.13 8.06 -52.49 -0.42 1.71 16 30 H 0.28 6.39 8.30 -40.82 -0.34 6.05 16 31 H 0.13 3.07 6.16 -52.49 -0.32 2.74 16 LS Contribution 298.17 15.07 4.49 4.49 Total: -1.00 -27.27 298.17 -8.81 -36.08 By element: Atomic # 1 Polarization: 5.78 SS G_CDS: -2.37 Total: 3.41 kcal Atomic # 6 Polarization: -21.80 SS G_CDS: -5.83 Total: -27.64 kcal Atomic # 7 Polarization: -28.18 SS G_CDS: 1.38 Total: -26.80 kcal Atomic # 14 Polarization: 17.81 SS G_CDS: -5.03 Total: 12.78 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.45 Total: -2.34 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -27.27 -8.81 -36.08 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001244724569.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.707 kcal (2) G-P(sol) polarization free energy of solvation -27.273 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.434 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.807 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.080 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.627 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds