Wall clock time and date at job start Tue Mar 31 2020 05:46:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30216 * 126.78967 * 2 1 4 4 O 1.20920 * 111.64740 * 179.97438 * 3 2 1 5 5 C 1.34065 * 111.55173 * 359.97438 * 4 3 2 6 6 Cl 1.73599 * 126.79690 * 179.97438 * 5 4 3 7 7 C 1.35677 * 106.40859 * 0.02562 * 5 4 3 8 8 C 1.50693 * 128.01626 * 179.97438 * 7 5 4 9 9 C 1.50700 * 109.47194 * 90.02154 * 8 7 5 10 10 O 1.21294 * 119.99924 * 0.02562 * 9 8 7 11 11 N 1.34774 * 120.00311 * 179.97438 * 9 8 7 12 12 C 1.37098 * 120.00411 * 180.02562 * 11 9 8 13 13 H 1.08003 * 119.99651 * 20.21485 * 12 11 9 14 14 C 1.38954 * 120.00074 * 200.22424 * 12 11 9 15 15 N 1.31406 * 119.99951 * 21.41770 * 14 12 11 16 16 Si 1.86799 * 119.99555 * 201.42072 * 14 12 11 17 17 H 1.48507 * 109.46971 * 89.99963 * 16 14 12 18 18 H 1.48496 * 109.47206 * 209.99658 * 16 14 12 19 19 H 1.48494 * 109.47445 * 329.99742 * 16 14 12 20 20 C 1.46498 * 119.99846 * 0.02562 * 11 9 8 21 21 C 1.47198 * 109.47257 * 83.95032 * 20 11 9 22 22 N 6.57696 * 107.57396 * 182.49782 * 2 1 3 23 23 H 1.08997 * 109.47553 * 90.02175 * 1 2 3 24 24 H 1.09000 * 109.47055 * 210.02484 * 1 2 3 25 25 H 1.08994 * 109.47088 * 330.02180 * 1 2 3 26 26 H 1.08996 * 109.47326 * 210.02352 * 8 7 5 27 27 H 1.09000 * 109.47034 * 330.02222 * 8 7 5 28 28 H 0.97001 * 119.99737 * 180.02562 * 15 14 12 29 29 H 1.09000 * 109.47309 * 203.94744 * 20 11 9 30 30 H 1.09000 * 109.47472 * 323.94997 * 20 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0428 0.0000 4 8 3.4540 0.7270 0.0005 5 6 3.6037 -0.6053 0.0015 6 17 5.1012 -1.4835 0.0018 7 6 2.3531 -1.1315 0.0010 8 6 1.9580 -2.5857 0.0011 9 6 1.8251 -3.0700 1.4220 10 8 2.0305 -2.3089 2.3438 11 7 1.4770 -4.3485 1.6684 12 6 1.3556 -4.7890 2.9610 13 1 1.2127 -4.0790 3.7622 14 6 1.4164 -6.1488 3.2403 15 7 1.9921 -6.9690 2.3902 16 14 0.6797 -6.8108 4.8241 17 1 -0.7418 -7.1744 4.5947 18 1 1.4349 -8.0142 5.2561 19 1 0.7603 -5.7702 5.8804 20 6 1.2284 -5.2676 0.5550 21 6 2.5061 -5.8304 0.0887 22 7 3.4928 -6.2640 -0.2733 23 1 -0.3634 -0.0004 -1.0276 24 1 -0.3633 -0.8898 0.5142 25 1 -0.3633 0.8901 0.5135 26 1 1.0044 -2.7032 -0.5135 27 1 2.7221 -3.1698 -0.5119 28 1 2.0342 -7.9183 2.5850 29 1 0.5762 -6.0746 0.8887 30 1 0.7496 -4.7277 -0.2619 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001251456471.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:46:10 Heat of formation + Delta-G solvation = 62.808327 kcal Electronic energy + Delta-G solvation = -19895.405585 eV Core-core repulsion = 16528.245919 eV Total energy + Delta-G solvation = -3367.159666 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.051 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -44.84842 -38.98184 -37.00860 -35.96829 -35.08178 -34.30703 -32.29262 -31.78331 -28.93120 -28.38130 -27.43756 -24.78254 -22.03482 -21.27836 -19.32992 -18.00670 -17.69416 -17.44291 -16.54869 -16.29632 -15.23199 -14.74965 -14.44107 -13.99829 -13.38068 -13.27704 -13.06044 -12.93908 -12.77161 -12.57311 -12.25229 -12.19577 -11.82724 -11.74830 -11.52438 -11.32331 -11.17492 -10.73119 -10.61662 -10.44608 -10.38057 -9.81893 -9.31785 -9.11236 -8.61631 -8.09799 -6.56000 -4.07245 1.24326 1.43699 2.24842 3.05824 3.19312 3.23125 3.46893 3.70135 3.80055 3.90917 4.07679 4.18832 4.69513 4.75413 4.86526 5.00391 5.12620 5.19169 5.49180 5.57053 5.61686 5.73825 5.75967 5.92234 6.04914 6.20144 6.39210 7.42266 7.83343 8.21248 8.21590 8.68436 8.93352 9.11979 9.65121 10.50220 Molecular weight = 283.05amu Principal moments of inertia in cm(-1) A = 0.020435 B = 0.005821 C = 0.005247 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1369.870308 B = 4808.703540 C = 5334.656284 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 C 0.043 3.957 3 N -0.355 5.355 4 O 0.103 5.897 5 C 0.006 3.994 6 Cl 0.047 6.953 7 C -0.131 4.131 8 C -0.069 4.069 9 C 0.460 3.540 10 O -0.562 6.562 11 N -0.441 5.441 12 C -0.315 4.315 13 H 0.108 0.892 14 C 0.034 3.966 15 N -0.874 5.874 16 Si 0.927 3.073 17 H -0.275 1.275 18 H -0.285 1.285 19 H -0.269 1.269 20 C 0.220 3.780 21 C 0.242 3.758 22 N -0.468 5.468 23 H 0.081 0.919 24 H 0.088 0.912 25 H 0.078 0.922 26 H 0.102 0.898 27 H 0.096 0.904 28 H 0.274 0.726 29 H 0.126 0.874 30 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.022 7.008 -7.610 11.100 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.115 4.115 3 N -0.063 5.063 4 O 0.037 5.963 5 C -0.084 4.084 6 Cl 0.075 6.925 7 C -0.136 4.136 8 C -0.109 4.109 9 C 0.248 3.752 10 O -0.443 6.443 11 N -0.162 5.162 12 C -0.442 4.442 13 H 0.126 0.874 14 C -0.170 4.170 15 N -0.513 5.513 16 Si 0.753 3.247 17 H -0.201 1.201 18 H -0.211 1.211 19 H -0.193 1.193 20 C 0.092 3.908 21 C -0.076 4.076 22 N -0.148 5.148 23 H 0.100 0.900 24 H 0.107 0.893 25 H 0.097 0.903 26 H 0.121 0.879 27 H 0.114 0.886 28 H 0.084 0.916 29 H 0.143 0.857 30 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -2.498 7.774 -7.659 11.195 hybrid contribution -0.292 -1.420 0.982 1.751 sum -2.790 6.354 -6.677 9.630 Atomic orbital electron populations 1.20205 0.85378 1.04515 1.03194 1.23210 0.98994 0.87816 1.01508 1.73851 0.88582 1.23041 1.20807 1.84841 1.22102 1.20737 1.68617 1.24431 0.91040 0.84646 1.08275 1.98456 1.28335 1.68970 1.96708 1.20223 0.89894 0.97165 1.06351 1.20077 1.03548 0.88992 0.98327 1.19827 0.82334 0.83745 0.89330 1.90583 1.53067 1.54875 1.45817 1.43596 1.59826 1.06944 1.05791 1.19701 1.48717 0.91852 0.83894 0.87412 1.25290 0.95998 0.96304 0.99440 1.69838 1.38519 1.05101 1.37819 0.85907 0.78918 0.78417 0.81448 1.20088 1.21098 1.19330 1.18725 0.88204 0.94725 0.89110 1.29306 0.95112 0.92518 0.90691 1.80945 1.11295 1.09897 1.12669 0.90018 0.89342 0.90340 0.87946 0.88566 0.91566 0.85660 0.89702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 42. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.88 10.39 36.00 0.37 -0.50 16 2 C 0.04 0.68 7.32 -82.12 -0.60 0.07 16 3 N -0.36 -5.90 12.07 33.44 0.40 -5.50 16 4 O 0.10 1.71 11.20 17.11 0.19 1.90 16 5 C 0.01 0.10 8.12 29.82 0.24 0.34 16 6 Cl 0.05 0.74 29.23 -51.86 -1.52 -0.78 16 7 C -0.13 -2.19 4.82 -104.38 -0.50 -2.69 16 8 C -0.07 -1.11 4.71 -29.04 -0.14 -1.25 16 9 C 0.46 9.76 7.56 -10.99 -0.08 9.68 16 10 O -0.56 -14.14 15.71 5.55 0.09 -14.05 16 11 N -0.44 -9.63 2.60 -117.93 -0.31 -9.93 16 12 C -0.31 -7.75 9.27 -14.93 -0.14 -7.89 16 13 H 0.11 2.83 7.43 -52.48 -0.39 2.44 16 14 C 0.03 0.81 4.84 -17.47 -0.08 0.72 16 15 N -0.87 -21.34 9.58 55.50 0.53 -20.81 16 16 Si 0.93 19.06 29.60 -169.99 -5.03 14.02 16 17 H -0.28 -5.45 7.11 56.52 0.40 -5.05 16 18 H -0.29 -5.99 7.11 56.52 0.40 -5.59 16 19 H -0.27 -5.65 7.11 56.52 0.40 -5.25 16 20 C 0.22 3.99 4.91 -6.83 -0.03 3.96 16 21 C 0.24 5.03 12.83 -20.73 -0.27 4.76 16 22 N -0.47 -10.60 18.54 42.19 0.78 -9.82 16 23 H 0.08 0.73 8.14 -51.93 -0.42 0.30 16 24 H 0.09 1.02 8.14 -51.93 -0.42 0.60 16 25 H 0.08 0.85 8.14 -51.93 -0.42 0.43 16 26 H 0.10 1.25 7.42 -51.93 -0.39 0.87 16 27 H 0.10 1.54 7.49 -51.93 -0.39 1.15 16 28 H 0.27 6.51 8.31 -40.82 -0.34 6.17 16 29 H 0.13 2.33 6.63 -51.93 -0.34 1.98 16 30 H 0.09 1.10 6.69 -51.93 -0.35 0.75 16 LS Contribution 293.00 15.07 4.42 4.42 Total: -1.00 -30.60 293.00 -3.93 -34.53 By element: Atomic # 1 Polarization: 1.07 SS G_CDS: -2.26 Total: -1.19 kcal Atomic # 6 Polarization: 8.43 SS G_CDS: -1.23 Total: 7.20 kcal Atomic # 7 Polarization: -47.47 SS G_CDS: 1.41 Total: -46.06 kcal Atomic # 8 Polarization: -12.43 SS G_CDS: 0.28 Total: -12.15 kcal Atomic # 14 Polarization: 19.06 SS G_CDS: -5.03 Total: 14.02 kcal Atomic # 17 Polarization: 0.74 SS G_CDS: -1.52 Total: -0.78 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -30.60 -3.93 -34.53 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001251456471.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.339 kcal (2) G-P(sol) polarization free energy of solvation -30.600 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.740 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.931 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.531 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.808 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds