Wall clock time and date at job start Tue Mar 31 2020 05:49:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.36614 * 120.00255 * 2 1 4 4 H 1.07995 * 120.00106 * 220.02654 * 3 2 1 5 5 C 1.39227 * 119.99726 * 40.02831 * 3 2 1 6 6 N 1.31241 * 120.00180 * 9.18634 * 5 3 2 7 7 Si 1.86803 * 119.99816 * 189.18343 * 5 3 2 8 8 H 1.48494 * 109.47129 * 90.00232 * 7 5 3 9 9 H 1.48504 * 109.47028 * 210.00123 * 7 5 3 10 10 H 1.48499 * 109.47132 * 329.99879 * 7 5 3 11 11 C 1.34784 * 120.00015 * 180.02562 * 2 1 3 12 12 O 1.21568 * 119.99676 * 5.41693 * 11 2 1 13 13 C 1.48088 * 120.00008 * 185.42164 * 11 2 1 14 14 C 1.39450 * 119.56493 * 186.15065 * 13 11 2 15 15 C 1.38339 * 119.22663 * 179.97438 * 14 13 11 16 16 C 1.39950 * 118.38162 * 359.73027 * 15 14 13 17 17 C 1.47862 * 120.46567 * 180.25958 * 16 15 14 18 18 N 1.34776 * 119.99208 * 0.29671 * 17 16 15 19 19 O 1.21549 * 120.00056 * 180.29337 * 17 16 15 20 20 C 1.39943 * 119.07556 * 0.55072 * 16 15 14 21 21 Cl 1.73595 * 119.65991 * 179.70755 * 20 16 15 22 22 N 1.31519 * 120.67987 * 359.43696 * 20 16 15 23 23 H 1.09005 * 109.47171 * 264.72963 * 1 2 3 24 24 H 1.08997 * 109.47407 * 24.73414 * 1 2 3 25 25 H 1.09005 * 109.47634 * 144.73498 * 1 2 3 26 26 H 0.97003 * 120.00160 * 179.97438 * 6 5 3 27 27 H 1.07998 * 120.38811 * 0.02562 * 14 13 11 28 28 H 1.07999 * 120.80920 * 180.02562 * 15 14 13 29 29 H 0.96999 * 120.00961 * 359.97438 * 18 17 16 30 30 H 0.97002 * 119.99381 * 179.97438 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1481 1.1831 0.0000 4 1 3.0383 1.2926 -0.6015 5 6 1.6966 2.2476 0.7755 6 7 0.7269 2.0643 1.6408 7 14 2.4710 3.9368 0.5845 8 1 1.7355 4.7041 -0.4525 9 1 2.4023 4.6620 1.8786 10 1 3.8907 3.7871 0.1757 11 6 2.1389 -1.1673 -0.0005 12 8 1.5350 -2.2176 -0.1004 13 6 3.6148 -1.1702 0.1207 14 6 4.3135 -2.3699 -0.0099 15 6 5.6922 -2.3645 0.1040 16 6 6.3352 -1.1445 0.3419 17 6 7.8074 -1.0846 0.4659 18 7 8.5401 -2.2093 0.3438 19 8 8.3568 -0.0213 0.6779 20 6 5.5650 0.0172 0.4670 21 17 6.3464 1.5375 0.7698 22 7 4.2557 -0.0301 0.3522 23 1 -0.3634 -0.0944 1.0234 24 1 -0.3634 0.9333 -0.4300 25 1 -0.3634 -0.8391 -0.5933 26 1 0.4126 2.8058 2.1813 27 1 3.7846 -3.2924 -0.1986 28 1 6.2588 -3.2787 0.0069 29 1 8.1017 -3.0579 0.1750 30 1 9.5059 -2.1700 0.4248 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001322790996.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:49:58 Heat of formation + Delta-G solvation = -13.930182 kcal Electronic energy + Delta-G solvation = -19921.862441 eV Core-core repulsion = 16551.375143 eV Total energy + Delta-G solvation = -3370.487298 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.051 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.36367 -38.98365 -37.74642 -36.04432 -34.96496 -33.92079 -32.13454 -31.57590 -30.77034 -26.88557 -25.42364 -23.89418 -23.15915 -21.00457 -19.73164 -18.38042 -17.76704 -17.15281 -16.05938 -15.83603 -15.00196 -14.83647 -14.64615 -14.35840 -14.26333 -14.14908 -13.39777 -13.28061 -12.83312 -12.32065 -11.85172 -11.43332 -11.32170 -11.07183 -11.05267 -10.87211 -10.76181 -10.35078 -9.75204 -9.71794 -9.60121 -9.26556 -9.15533 -8.62106 -8.48418 -7.64811 -6.52954 -4.05463 0.58161 1.44331 2.29389 2.82337 3.14502 3.21857 3.29560 3.45557 3.62886 4.03601 4.36445 4.43750 4.70546 4.83495 4.94334 5.20881 5.33177 5.49618 5.79620 6.02332 6.26211 6.53040 6.70301 6.73155 6.77645 7.08721 7.25865 7.39602 7.70510 8.10228 8.26621 8.33098 8.92341 9.25378 9.70016 10.49162 Molecular weight = 283.05amu Principal moments of inertia in cm(-1) A = 0.017728 B = 0.007704 C = 0.005485 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1579.075682 B = 3633.793725 C = 5103.775776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.108 3.892 2 N -0.395 5.395 3 C -0.285 4.285 4 H 0.115 0.885 5 C 0.045 3.955 6 N -0.851 5.851 7 Si 0.917 3.083 8 H -0.276 1.276 9 H -0.281 1.281 10 H -0.254 1.254 11 C 0.477 3.523 12 O -0.609 6.609 13 C 0.160 3.840 14 C -0.145 4.145 15 C -0.045 4.045 16 C -0.204 4.204 17 C 0.567 3.433 18 N -0.855 5.855 19 O -0.521 6.521 20 C 0.220 3.780 21 Cl -0.006 7.006 22 N -0.416 5.416 23 H 0.060 0.940 24 H 0.064 0.936 25 H 0.045 0.955 26 H 0.274 0.726 27 H 0.152 0.848 28 H 0.141 0.859 29 H 0.398 0.602 30 H 0.403 0.597 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.132 -6.137 -2.593 12.127 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.035 4.035 2 N -0.108 5.108 3 C -0.415 4.415 4 H 0.132 0.868 5 C -0.164 4.164 6 N -0.487 5.487 7 Si 0.742 3.258 8 H -0.202 1.202 9 H -0.207 1.207 10 H -0.178 1.178 11 C 0.267 3.733 12 O -0.498 6.498 13 C 0.021 3.979 14 C -0.167 4.167 15 C -0.071 4.071 16 C -0.212 4.212 17 C 0.353 3.647 18 N -0.420 5.420 19 O -0.397 6.397 20 C 0.052 3.948 21 Cl 0.023 6.977 22 N -0.129 5.129 23 H 0.079 0.921 24 H 0.082 0.918 25 H 0.064 0.936 26 H 0.085 0.915 27 H 0.169 0.831 28 H 0.158 0.842 29 H 0.227 0.773 30 H 0.234 0.766 Dipole moment (debyes) X Y Z Total from point charges 9.370 -4.807 -2.253 10.770 hybrid contribution 1.028 -0.090 0.092 1.036 sum 10.398 -4.897 -2.162 11.695 Atomic orbital electron populations 1.21486 0.80496 1.00035 1.01500 1.43574 1.05905 1.05159 1.56163 1.20104 1.09829 0.87265 1.24271 0.86791 1.25596 0.96034 1.00835 0.93916 1.69850 1.25931 1.32986 1.19894 0.86034 0.80909 0.80890 0.77990 1.20171 1.20651 1.17778 1.17817 0.84851 0.84334 0.86335 1.90636 1.68067 1.31299 1.59780 1.21614 0.95567 0.87591 0.93082 1.22033 0.93557 1.00183 1.00925 1.21470 0.94474 0.96082 0.95061 1.20435 0.94088 0.94196 1.12527 1.18010 0.86584 0.83962 0.76177 1.43715 1.10976 1.10293 1.76986 1.90890 1.72815 1.28523 1.47434 1.22101 0.90314 0.87711 0.94662 1.98424 1.77418 1.28949 1.92918 1.68338 1.05894 1.28097 1.10615 0.92133 0.91753 0.93631 0.91534 0.83068 0.84152 0.77268 0.76611 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.51 8.80 59.84 0.53 3.04 16 2 N -0.40 -9.97 2.91 -123.21 -0.36 -10.33 16 3 C -0.28 -7.21 7.38 -15.05 -0.11 -7.32 16 4 H 0.11 2.89 6.17 -52.49 -0.32 2.56 16 5 C 0.04 1.12 5.14 -17.44 -0.09 1.03 16 6 N -0.85 -22.07 11.73 55.51 0.65 -21.42 16 7 Si 0.92 19.92 29.56 -169.99 -5.03 14.89 16 8 H -0.28 -5.84 7.11 56.52 0.40 -5.44 16 9 H -0.28 -6.12 7.11 56.52 0.40 -5.72 16 10 H -0.25 -5.51 7.11 56.52 0.40 -5.11 16 11 C 0.48 11.70 7.61 -12.22 -0.09 11.60 16 12 O -0.61 -15.60 15.96 5.31 0.08 -15.52 16 13 C 0.16 3.44 6.63 -82.95 -0.55 2.89 16 14 C -0.15 -2.45 9.61 -39.09 -0.38 -2.82 16 15 C -0.04 -0.60 9.64 -38.90 -0.37 -0.98 16 16 C -0.20 -3.27 5.90 -104.68 -0.62 -3.89 16 17 C 0.57 8.18 8.04 -12.32 -0.10 8.08 16 18 N -0.85 -7.64 8.83 30.53 0.27 -7.37 16 19 O -0.52 -9.23 14.82 5.32 0.08 -9.15 16 20 C 0.22 4.34 7.31 -17.05 -0.12 4.22 16 21 Cl -0.01 -0.12 26.18 -51.86 -1.36 -1.48 16 22 N -0.42 -9.18 6.46 -6.63 -0.04 -9.23 16 23 H 0.06 1.47 7.72 -51.93 -0.40 1.07 16 24 H 0.06 1.46 7.69 -51.93 -0.40 1.06 16 25 H 0.05 1.00 7.51 -51.93 -0.39 0.61 16 26 H 0.27 6.72 8.31 -40.82 -0.34 6.38 16 27 H 0.15 2.35 7.64 -52.49 -0.40 1.95 16 28 H 0.14 1.15 6.51 -52.49 -0.34 0.81 16 29 H 0.40 2.39 6.93 -40.82 -0.28 2.11 16 30 H 0.40 2.91 8.93 -40.82 -0.36 2.54 16 LS Contribution 281.24 15.07 4.24 4.24 Total: -1.00 -31.29 281.24 -5.41 -36.70 By element: Atomic # 1 Polarization: 4.85 SS G_CDS: -2.04 Total: 2.81 kcal Atomic # 6 Polarization: 17.76 SS G_CDS: -1.91 Total: 15.85 kcal Atomic # 7 Polarization: -48.86 SS G_CDS: 0.52 Total: -48.35 kcal Atomic # 8 Polarization: -24.83 SS G_CDS: 0.16 Total: -24.67 kcal Atomic # 14 Polarization: 19.92 SS G_CDS: -5.03 Total: 14.89 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -1.36 Total: -1.48 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -31.29 -5.41 -36.70 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001322790996.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.770 kcal (2) G-P(sol) polarization free energy of solvation -31.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.520 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.700 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds