Wall clock time and date at job start Tue Mar 31 2020 06:27:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52999 * 109.47474 * 2 1 4 4 N 1.46503 * 109.47527 * 179.97438 * 3 2 1 5 5 C 1.36912 * 119.99728 * 279.33264 * 4 3 2 6 6 H 1.07999 * 119.99631 * 171.52763 * 5 4 3 7 7 C 1.39011 * 120.00334 * 351.51847 * 5 4 3 8 8 N 1.31389 * 120.00235 * 27.61233 * 7 5 4 9 9 Si 1.86805 * 120.00311 * 207.60634 * 7 5 4 10 10 H 1.48502 * 109.46832 * 94.99194 * 9 7 5 11 11 H 1.48495 * 109.47217 * 214.99601 * 9 7 5 12 12 H 1.48494 * 109.47020 * 334.99594 * 9 7 5 13 13 C 1.34775 * 119.99914 * 99.32620 * 4 3 2 14 14 O 1.21629 * 120.00095 * 186.56960 * 13 4 3 15 15 C 1.47373 * 120.00039 * 6.56985 * 13 4 3 16 16 C 1.39803 * 120.18260 * 330.30765 * 15 13 4 17 17 C 1.37716 * 119.91416 * 179.97438 * 16 15 13 18 18 C 1.38715 * 120.28942 * 0.02562 * 17 16 15 19 19 Cl 1.73599 * 119.81125 * 179.97438 * 18 17 16 20 20 C 1.38229 * 120.37332 * 359.97438 * 18 17 16 21 21 C 1.38612 * 120.08002 * 0.02562 * 20 18 17 22 22 O 1.35657 * 120.14605 * 180.27403 * 21 20 18 23 23 H 1.08991 * 109.47258 * 179.97438 * 1 2 3 24 24 H 1.09001 * 109.47211 * 300.00220 * 1 2 3 25 25 H 1.09007 * 109.47136 * 59.99588 * 1 2 3 26 26 H 1.08998 * 109.47437 * 240.00253 * 2 1 3 27 27 H 1.09007 * 109.47136 * 120.00412 * 2 1 3 28 28 H 1.09010 * 109.46952 * 60.00274 * 3 2 1 29 29 H 1.08994 * 109.47557 * 300.00507 * 3 2 1 30 30 H 0.96997 * 120.00669 * 180.02562 * 8 7 5 31 31 H 1.07996 * 120.04496 * 359.97438 * 16 15 13 32 32 H 1.07994 * 119.85663 * 180.02562 * 17 16 15 33 33 H 1.07999 * 119.95471 * 180.02562 * 20 18 17 34 34 H 0.96704 * 114.00026 * 269.71851 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5051 1.4425 0.0006 5 6 4.1891 1.2504 1.1710 6 1 5.2602 1.1136 1.1541 7 6 3.5049 1.2316 2.3809 8 7 2.2461 0.8572 2.4181 9 14 4.3753 1.7385 3.9542 10 1 4.1052 3.1726 4.2292 11 1 3.8752 0.9149 5.0840 12 1 5.8376 1.5310 3.7997 13 6 4.1794 1.6315 -1.1509 14 8 5.3897 1.5131 -1.1733 15 6 3.4503 1.9815 -2.3829 16 6 2.1369 1.5411 -2.5715 17 6 1.4606 1.8719 -3.7246 18 6 2.0769 2.6404 -4.7013 19 17 1.2130 3.0495 -6.1504 20 6 3.3751 3.0821 -4.5271 21 6 4.0702 2.7582 -3.3725 22 8 5.3423 3.1957 -3.1977 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3634 0.5139 0.8900 25 1 -0.3634 0.5139 -0.8900 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5139 0.8900 28 1 1.6767 1.9563 0.8901 29 1 1.6767 1.9564 -0.8899 30 1 1.7685 0.8444 3.2623 31 1 1.6533 0.9423 -1.8140 32 1 0.4459 1.5316 -3.8692 33 1 3.8483 3.6804 -5.2917 34 1 6.0165 2.5885 -3.5323 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000045092349.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:27:39 Heat of formation + Delta-G solvation = -17.807235 kcal Electronic energy + Delta-G solvation = -20540.422732 eV Core-core repulsion = 17273.307656 eV Total energy + Delta-G solvation = -3267.115076 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.09485 -38.01810 -36.91410 -35.96685 -35.28096 -32.74560 -31.57745 -30.46680 -29.51221 -26.04439 -24.97624 -22.80096 -22.42975 -20.78407 -19.76038 -17.95591 -17.10660 -16.62994 -15.99153 -15.53788 -14.92771 -14.55279 -14.42794 -13.98164 -13.70496 -13.39802 -12.97575 -12.85641 -12.48879 -12.13434 -11.97485 -11.68267 -11.51660 -11.09621 -11.07662 -10.91364 -10.61060 -10.47681 -10.42063 -10.27461 -10.08347 -9.80156 -8.86614 -8.63369 -8.45534 -8.25988 -7.93085 -6.52751 -3.84209 1.07886 1.41764 2.17429 3.07548 3.20088 3.25197 3.45286 3.98629 4.20568 4.55629 4.68750 4.95160 5.03204 5.19879 5.42563 5.58619 5.78975 5.84903 5.91635 6.01690 6.14790 6.20796 6.32571 6.43054 6.50298 6.58338 6.72222 6.82810 6.84622 7.21608 7.39428 7.64932 7.96250 8.04954 8.37684 9.04584 9.27477 9.88498 10.41422 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.022614 B = 0.005569 C = 0.004663 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1237.850444 B = 5026.684815 C = 6003.659820 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.127 4.127 3 C 0.087 3.913 4 N -0.421 5.421 5 C -0.301 4.301 6 H 0.110 0.890 7 C 0.035 3.965 8 N -0.848 5.848 9 Si 0.920 3.080 10 H -0.276 1.276 11 H -0.284 1.284 12 H -0.267 1.267 13 C 0.468 3.532 14 O -0.588 6.588 15 C -0.116 4.116 16 C -0.107 4.107 17 C -0.130 4.130 18 C -0.021 4.021 19 Cl -0.081 7.081 20 C -0.150 4.150 21 C 0.156 3.844 22 O -0.478 6.478 23 H 0.043 0.957 24 H 0.058 0.942 25 H 0.037 0.963 26 H 0.033 0.967 27 H 0.109 0.891 28 H 0.105 0.895 29 H 0.064 0.936 30 H 0.270 0.730 31 H 0.176 0.824 32 H 0.133 0.867 33 H 0.136 0.864 34 H 0.395 0.605 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.421 1.020 -9.395 10.895 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.165 4.165 3 C -0.036 4.036 4 N -0.136 5.136 5 C -0.428 4.428 6 H 0.128 0.872 7 C -0.169 4.169 8 N -0.486 5.486 9 Si 0.746 3.254 10 H -0.202 1.202 11 H -0.210 1.210 12 H -0.192 1.192 13 C 0.258 3.742 14 O -0.475 6.475 15 C -0.120 4.120 16 C -0.125 4.125 17 C -0.148 4.148 18 C -0.048 4.048 19 Cl -0.052 7.052 20 C -0.169 4.169 21 C 0.109 3.891 22 O -0.289 6.289 23 H 0.062 0.938 24 H 0.077 0.923 25 H 0.056 0.944 26 H 0.051 0.949 27 H 0.127 0.873 28 H 0.123 0.877 29 H 0.082 0.918 30 H 0.081 0.919 31 H 0.193 0.807 32 H 0.151 0.849 33 H 0.154 0.846 34 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -5.311 1.438 -9.055 10.596 hybrid contribution 0.289 -0.081 0.407 0.506 sum -5.022 1.357 -8.648 10.092 Atomic orbital electron populations 1.21638 0.96940 1.00362 1.00834 1.21925 0.94211 0.97828 1.02511 1.22572 0.80818 0.97598 1.02627 1.43769 1.05571 1.57813 1.06491 1.19815 0.94198 1.46778 0.82015 0.87226 1.25308 0.95930 0.96067 0.99639 1.70184 1.10695 1.40454 1.27301 0.86014 0.80182 0.78917 0.80332 1.20235 1.20980 1.19160 1.17378 0.87207 0.86885 0.82715 1.90588 1.13587 1.58416 1.84876 1.20886 0.95165 0.98718 0.97281 1.22564 0.93532 0.99446 0.96972 1.20974 1.00868 0.99958 0.93043 1.20750 0.93085 1.01682 0.89331 1.98343 1.76817 1.92788 1.37248 1.21127 0.94019 1.03624 0.98158 1.18211 0.86437 0.93350 0.91105 1.84686 1.12708 1.47296 1.84205 0.93793 0.92298 0.94403 0.94870 0.87262 0.87712 0.91817 0.91937 0.80704 0.84892 0.84593 0.74754 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.19 9.84 37.15 0.37 -1.83 16 2 C -0.13 -2.46 4.63 -26.73 -0.12 -2.58 16 3 C 0.09 1.84 4.15 -4.04 -0.02 1.82 16 4 N -0.42 -10.46 2.65 -116.05 -0.31 -10.77 16 5 C -0.30 -7.99 9.36 -15.00 -0.14 -8.13 16 6 H 0.11 3.11 7.32 -52.49 -0.38 2.73 16 7 C 0.04 0.86 5.13 -17.45 -0.09 0.77 16 8 N -0.85 -19.92 7.95 55.50 0.44 -19.48 16 9 Si 0.92 19.62 29.63 -169.99 -5.04 14.58 16 10 H -0.28 -5.93 7.11 56.52 0.40 -5.53 16 11 H -0.28 -5.93 7.11 56.52 0.40 -5.53 16 12 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 13 C 0.47 11.57 7.31 -12.54 -0.09 11.48 16 14 O -0.59 -16.14 15.33 -13.99 -0.21 -16.35 16 15 C -0.12 -2.36 5.61 -104.84 -0.59 -2.95 16 16 C -0.11 -1.84 7.49 -39.19 -0.29 -2.14 16 17 C -0.13 -1.90 9.80 -39.60 -0.39 -2.29 16 18 C -0.02 -0.31 6.32 -39.41 -0.25 -0.56 16 19 Cl -0.08 -1.00 28.94 -51.86 -1.50 -2.50 16 20 C -0.15 -2.29 9.75 -39.45 -0.38 -2.68 16 21 C 0.16 2.87 6.69 -38.69 -0.26 2.61 16 22 O -0.48 -8.82 12.00 -37.92 -0.45 -9.28 16 23 H 0.04 0.62 8.14 -51.93 -0.42 0.20 16 24 H 0.06 0.95 8.14 -51.93 -0.42 0.53 16 25 H 0.04 0.51 7.85 -51.93 -0.41 0.11 16 26 H 0.03 0.63 7.13 -51.93 -0.37 0.26 16 27 H 0.11 2.46 6.17 -51.93 -0.32 2.14 16 28 H 0.11 2.40 5.88 -51.92 -0.31 2.10 16 29 H 0.06 1.23 3.92 -52.83 -0.21 1.03 16 30 H 0.27 6.01 8.31 -40.82 -0.34 5.67 16 31 H 0.18 3.00 2.28 -52.49 -0.12 2.88 16 32 H 0.13 1.60 8.06 -52.49 -0.42 1.18 16 33 H 0.14 1.79 8.06 -52.49 -0.42 1.36 16 34 H 0.39 5.82 9.05 45.56 0.41 6.23 16 LS Contribution 294.21 15.07 4.43 4.43 Total: -1.00 -28.47 294.21 -7.43 -35.89 By element: Atomic # 1 Polarization: 12.47 SS G_CDS: -2.53 Total: 9.95 kcal Atomic # 6 Polarization: -4.21 SS G_CDS: -2.26 Total: -6.47 kcal Atomic # 7 Polarization: -30.38 SS G_CDS: 0.13 Total: -30.25 kcal Atomic # 8 Polarization: -24.96 SS G_CDS: -0.67 Total: -25.63 kcal Atomic # 14 Polarization: 19.62 SS G_CDS: -5.04 Total: 14.58 kcal Atomic # 17 Polarization: -1.00 SS G_CDS: -1.50 Total: -2.50 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -28.47 -7.43 -35.89 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000045092349.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.086 kcal (2) G-P(sol) polarization free energy of solvation -28.467 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.381 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.426 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.893 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.807 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds