Wall clock time and date at job start Tue Mar 31 2020 06:00:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38160 * 120.02332 * 2 1 4 4 C 1.38340 * 120.04509 * 179.97438 * 3 2 1 5 5 Cl 1.73602 * 119.96183 * 180.02562 * 4 3 2 6 6 C 1.38394 * 120.08224 * 359.72033 * 4 3 2 7 7 C 1.38119 * 120.04072 * 0.56047 * 6 4 3 8 8 C 1.38701 * 120.01786 * 179.97438 * 2 1 3 9 9 O 1.35921 * 120.04373 * 0.02562 * 8 2 1 10 10 C 1.42897 * 116.99896 * 180.02562 * 9 8 2 11 11 C 1.50700 * 109.47370 * 179.97438 * 10 9 8 12 12 O 1.21294 * 119.99735 * 0.02562 * 11 10 9 13 13 N 1.34779 * 120.00394 * 179.97438 * 11 10 9 14 14 C 1.46498 * 119.99803 * 359.97438 * 13 11 10 15 15 C 1.37095 * 120.00098 * 180.02562 * 13 11 10 16 16 H 1.08006 * 119.99902 * 322.82223 * 15 13 11 17 17 C 1.38946 * 120.00259 * 142.82459 * 15 13 11 18 18 N 1.31412 * 120.00346 * 158.40514 * 17 15 13 19 19 Si 1.86801 * 119.99868 * 338.40859 * 17 15 13 20 20 H 1.48501 * 109.47148 * 95.71794 * 19 17 15 21 21 H 1.48501 * 109.47194 * 215.71680 * 19 17 15 22 22 H 1.48503 * 109.47108 * 335.71767 * 19 17 15 23 23 H 1.09005 * 109.47092 * 270.02507 * 1 2 3 24 24 H 1.09002 * 109.46654 * 30.02194 * 1 2 3 25 25 H 1.09000 * 109.47008 * 150.02282 * 1 2 3 26 26 H 1.08002 * 119.97920 * 359.95794 * 3 2 1 27 27 H 1.08003 * 119.98015 * 180.27430 * 6 4 3 28 28 H 1.08001 * 120.02005 * 179.71837 * 7 6 4 29 29 H 1.09003 * 109.46954 * 299.99299 * 10 9 8 30 30 H 1.09002 * 109.47766 * 59.99552 * 10 9 8 31 31 H 1.09001 * 109.46927 * 85.13464 * 14 13 11 32 32 H 1.08998 * 109.47219 * 205.13431 * 14 13 11 33 33 H 1.08999 * 109.47125 * 325.13599 * 14 13 11 34 34 H 0.97001 * 120.00366 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1984 1.1962 0.0000 4 6 3.5817 1.1967 0.0005 5 17 4.4482 2.7011 0.0012 6 6 4.2759 -0.0005 0.0069 7 6 3.5884 -1.1984 0.0011 8 6 2.2009 -1.2010 0.0005 9 8 1.5226 -2.3788 0.0005 10 6 2.3022 -3.5764 0.0017 11 6 1.3855 -4.7726 0.0021 12 8 0.1829 -4.6149 0.0011 13 7 1.9020 -6.0175 0.0027 14 6 3.3546 -6.2078 0.0023 15 6 1.0681 -7.1056 0.0026 16 1 0.1478 -7.0807 0.5674 17 6 1.4068 -8.2404 -0.7241 18 7 0.8755 -9.4018 -0.4145 19 14 2.6174 -8.1153 -2.1411 20 1 3.9783 -8.4669 -1.6620 21 1 2.2150 -9.0528 -3.2203 22 1 2.6214 -6.7268 -2.6677 23 1 -0.3633 0.0004 1.0277 24 1 -0.3633 0.8898 -0.5142 25 1 -0.3633 -0.8902 -0.5135 26 1 1.6584 2.1316 -0.0007 27 1 5.3559 0.0018 0.0118 28 1 4.1304 -2.1325 0.0015 29 1 2.9316 -3.6010 -0.8879 30 1 2.9305 -3.6002 0.8921 31 1 3.7265 -6.1680 1.0261 32 1 3.5938 -7.1777 -0.4337 33 1 3.8242 -5.4193 -0.5858 34 1 1.1122 -10.1941 -0.9215 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000263660631.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:00:10 Heat of formation + Delta-G solvation = -39.771936 kcal Electronic energy + Delta-G solvation = -19518.771134 eV Core-core repulsion = 16250.703597 eV Total energy + Delta-G solvation = -3268.067537 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -40.43081 -38.81907 -37.47603 -36.31752 -34.87357 -32.95625 -32.18674 -30.14766 -28.51953 -26.89580 -26.52972 -24.64377 -22.42512 -21.72342 -19.20915 -18.17911 -17.19120 -16.46026 -16.30996 -16.17424 -15.78223 -15.41777 -14.52128 -14.38215 -13.99890 -13.56536 -13.35692 -12.93886 -12.82263 -12.74864 -12.65779 -12.39851 -12.32266 -11.87516 -11.70268 -11.51766 -11.34984 -10.90251 -10.86466 -10.64412 -10.48302 -10.02104 -9.18497 -9.08166 -8.64878 -8.12283 -7.88833 -6.49327 -4.08043 1.05438 1.10184 2.01407 2.93996 3.02094 3.14142 3.17928 3.43812 3.52902 4.04878 4.38026 4.54718 4.62706 4.84936 4.93231 5.01226 5.18696 5.31838 5.33229 5.35938 5.46082 5.64140 5.65649 5.73208 5.91300 5.95995 6.03767 6.10254 6.13708 6.33169 6.48699 7.27364 7.46144 8.14030 8.37861 8.83135 9.17759 9.59086 10.62275 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.032695 B = 0.003644 C = 0.003388 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 856.198948 B = 7681.569961 C = 8263.127393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.104 4.104 3 C -0.074 4.074 4 C -0.075 4.075 5 Cl -0.080 7.080 6 C -0.074 4.074 7 C -0.199 4.199 8 C 0.142 3.858 9 O -0.277 6.277 10 C 0.043 3.957 11 C 0.463 3.537 12 O -0.542 6.542 13 N -0.464 5.464 14 C 0.059 3.941 15 C -0.318 4.318 16 H 0.108 0.892 17 C 0.061 3.939 18 N -0.859 5.859 19 Si 0.880 3.120 20 H -0.274 1.274 21 H -0.285 1.285 22 H -0.265 1.265 23 H 0.072 0.928 24 H 0.065 0.935 25 H 0.080 0.920 26 H 0.137 0.863 27 H 0.134 0.866 28 H 0.138 0.862 29 H 0.082 0.918 30 H 0.082 0.918 31 H 0.056 0.944 32 H 0.070 0.930 33 H 0.053 0.947 34 H 0.276 0.724 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.420 18.415 0.103 20.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.105 4.105 3 C -0.093 4.093 4 C -0.102 4.102 5 Cl -0.051 7.051 6 C -0.093 4.093 7 C -0.218 4.218 8 C 0.095 3.905 9 O -0.188 6.188 10 C -0.036 4.036 11 C 0.249 3.751 12 O -0.422 6.422 13 N -0.188 5.188 14 C -0.085 4.085 15 C -0.445 4.445 16 H 0.126 0.874 17 C -0.146 4.146 18 N -0.495 5.495 19 Si 0.707 3.293 20 H -0.201 1.201 21 H -0.212 1.212 22 H -0.189 1.189 23 H 0.091 0.909 24 H 0.084 0.916 25 H 0.099 0.901 26 H 0.155 0.845 27 H 0.152 0.848 28 H 0.156 0.844 29 H 0.100 0.900 30 H 0.099 0.901 31 H 0.075 0.925 32 H 0.088 0.912 33 H 0.071 0.929 34 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 8.623 18.351 0.071 20.276 hybrid contribution 1.267 -0.127 -0.786 1.496 sum 9.890 18.224 -0.716 20.747 Atomic orbital electron populations 1.20663 0.89524 1.03381 1.02868 1.19225 0.97119 0.89465 1.04682 1.20728 0.91733 0.97827 0.98995 1.20689 0.92306 0.86863 1.10352 1.98348 1.76903 1.32561 1.97307 1.20773 1.00199 0.90084 0.98259 1.21256 0.93034 0.99148 1.08365 1.19077 0.90399 0.86478 0.94565 1.86227 1.34296 1.11203 1.87121 1.22760 0.94627 0.83827 1.02382 1.19689 0.88777 0.83255 0.83335 1.90610 1.14916 1.84791 1.51834 1.43565 1.04617 1.04609 1.66036 1.22083 0.83249 1.01862 1.01276 1.19059 1.06158 0.89233 1.30027 0.87419 1.25371 0.97438 0.94793 0.96985 1.69739 1.43129 0.98474 1.38177 0.86926 0.80297 0.78989 0.83042 1.20127 1.21196 1.18919 0.90946 0.91627 0.90075 0.84469 0.84847 0.84386 0.90029 0.90054 0.92538 0.91161 0.92869 0.91378 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.29 9.79 36.01 0.35 -0.94 16 2 C -0.10 -1.34 5.89 -104.48 -0.62 -1.96 16 3 C -0.07 -0.83 9.48 -39.57 -0.38 -1.20 16 4 C -0.08 -0.84 6.32 -39.49 -0.25 -1.08 16 5 Cl -0.08 -0.79 28.95 -51.86 -1.50 -2.30 16 6 C -0.07 -0.80 9.82 -39.57 -0.39 -1.19 16 7 C -0.20 -2.39 9.04 -39.44 -0.36 -2.74 16 8 C 0.14 2.04 6.66 -39.22 -0.26 1.78 16 9 O -0.28 -4.86 8.71 -39.40 -0.34 -5.21 16 10 C 0.04 0.72 3.84 36.01 0.14 0.85 16 11 C 0.46 10.61 7.70 -10.98 -0.08 10.52 16 12 O -0.54 -14.83 16.36 -14.36 -0.24 -15.07 16 13 N -0.46 -10.90 2.59 -122.19 -0.32 -11.21 16 14 C 0.06 1.07 8.78 59.85 0.53 1.59 16 15 C -0.32 -8.85 9.37 -14.94 -0.14 -8.99 16 16 H 0.11 3.38 7.90 -52.48 -0.41 2.96 16 17 C 0.06 1.63 5.29 -17.47 -0.09 1.54 16 18 N -0.86 -24.33 13.96 55.50 0.77 -23.55 16 19 Si 0.88 19.81 24.96 -169.99 -4.24 15.56 16 20 H -0.27 -5.65 6.69 56.52 0.38 -5.27 16 21 H -0.29 -6.49 7.11 56.52 0.40 -6.09 16 22 H -0.26 -5.89 7.11 56.52 0.40 -5.49 16 23 H 0.07 0.83 8.14 -51.93 -0.42 0.40 16 24 H 0.06 0.62 8.09 -51.93 -0.42 0.20 16 25 H 0.08 1.15 7.53 -51.93 -0.39 0.76 16 26 H 0.14 1.23 8.06 -52.49 -0.42 0.81 16 27 H 0.13 1.15 8.06 -52.48 -0.42 0.73 16 28 H 0.14 1.41 6.30 -52.49 -0.33 1.08 16 29 H 0.08 1.17 6.93 -51.93 -0.36 0.81 16 30 H 0.08 1.12 7.63 -51.93 -0.40 0.73 16 31 H 0.06 0.88 8.14 -51.93 -0.42 0.46 16 32 H 0.07 1.37 3.42 -51.93 -0.18 1.19 16 33 H 0.05 0.77 6.64 -51.93 -0.34 0.42 16 34 H 0.28 7.18 8.31 -40.82 -0.34 6.84 16 LS Contribution 303.57 15.07 4.57 4.57 Total: -1.00 -31.95 303.57 -6.52 -38.47 By element: Atomic # 1 Polarization: 4.23 SS G_CDS: -3.68 Total: 0.54 kcal Atomic # 6 Polarization: -0.27 SS G_CDS: -1.55 Total: -1.82 kcal Atomic # 7 Polarization: -35.23 SS G_CDS: 0.46 Total: -34.77 kcal Atomic # 8 Polarization: -19.70 SS G_CDS: -0.58 Total: -20.27 kcal Atomic # 14 Polarization: 19.81 SS G_CDS: -4.24 Total: 15.56 kcal Atomic # 17 Polarization: -0.79 SS G_CDS: -1.50 Total: -2.30 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -31.95 -6.52 -38.47 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000263660631.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.297 kcal (2) G-P(sol) polarization free energy of solvation -31.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.251 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.475 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds