Wall clock time and date at job start Tue Mar 31 2020 06:00:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50688 * 1 3 3 C 1.38277 * 119.96413 * 2 1 4 4 C 1.38255 * 120.12196 * 180.23699 * 3 2 1 5 5 C 1.38253 * 120.03942 * 359.48662 * 4 3 2 6 6 Cl 1.73603 * 120.03867 * 180.27548 * 5 4 3 7 7 C 1.38817 * 119.92523 * 0.51464 * 5 4 3 8 8 O 1.35923 * 120.06221 * 179.76496 * 7 5 4 9 9 C 1.42896 * 117.00198 * 185.46505 * 8 7 5 10 10 H 1.09001 * 109.47191 * 34.99738 * 9 8 7 11 11 C 1.53002 * 109.47423 * 274.99938 * 9 8 7 12 12 C 1.50697 * 109.47408 * 154.99563 * 9 8 7 13 13 O 1.21296 * 119.99517 * 5.00663 * 12 9 8 14 14 N 1.34777 * 120.00560 * 184.99616 * 12 9 8 15 15 C 1.37098 * 120.00551 * 179.97438 * 14 12 9 16 16 H 1.07998 * 119.99419 * 0.02562 * 15 14 12 17 17 C 1.38946 * 120.00022 * 180.02562 * 15 14 12 18 18 N 1.31414 * 120.00234 * 0.02562 * 17 15 14 19 19 Si 1.86799 * 119.99629 * 180.02562 * 17 15 14 20 20 H 1.48493 * 109.47379 * 0.02562 * 19 17 15 21 21 H 1.48498 * 109.47175 * 120.00090 * 19 17 15 22 22 H 1.48505 * 109.47105 * 239.99854 * 19 17 15 23 23 C 1.38161 * 119.96483 * 179.97438 * 2 1 3 24 24 H 1.09004 * 109.47716 * 89.99887 * 1 2 3 25 25 H 1.09006 * 109.47561 * 210.00174 * 1 2 3 26 26 H 1.09005 * 109.47359 * 329.99853 * 1 2 3 27 27 H 1.08001 * 119.94089 * 359.95656 * 3 2 1 28 28 H 1.07998 * 119.97516 * 179.74630 * 4 3 2 29 29 H 1.09002 * 109.47221 * 59.99681 * 11 9 8 30 30 H 1.08995 * 109.47621 * 179.97438 * 11 9 8 31 31 H 1.09001 * 109.46774 * 300.00055 * 11 9 8 32 32 H 0.97006 * 119.99737 * 0.02562 * 14 12 9 33 33 H 0.96999 * 119.99989 * 179.97438 * 18 17 15 34 34 H 1.07995 * 120.01376 * 0.02562 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1975 1.1979 0.0000 4 6 3.5801 1.2018 -0.0049 5 6 4.2755 0.0069 0.0008 6 17 6.0115 0.0117 0.0018 7 6 3.5840 -1.1968 0.0008 8 8 4.2649 -2.3732 0.0016 9 6 3.4931 -3.5697 -0.1198 10 1 2.6407 -3.3874 -0.7743 11 6 2.9929 -3.9963 1.2618 12 6 4.3499 -4.6632 -0.7036 13 8 5.5302 -4.4675 -0.9032 14 7 3.8049 -5.8588 -1.0038 15 6 4.5843 -6.8535 -1.5354 16 1 5.6352 -6.6791 -1.7133 17 6 4.0222 -8.0858 -1.8453 18 7 2.7434 -8.2977 -1.6293 19 14 5.0845 -9.4413 -2.5690 20 1 6.4796 -8.9534 -2.7128 21 1 5.0636 -10.6211 -1.6675 22 1 4.5546 -9.8272 -3.9016 23 6 2.1970 -1.1969 0.0005 24 1 -0.3635 0.0000 -1.0277 25 1 -0.3634 -0.8900 0.5139 26 1 -0.3634 0.8900 0.5139 27 1 1.6560 2.1324 -0.0007 28 1 4.1170 2.1388 -0.0091 29 1 2.3731 -3.2054 1.6841 30 1 2.4038 -4.9087 1.1692 31 1 3.8452 -4.1786 1.9164 32 1 2.8609 -6.0152 -0.8443 33 1 2.3510 -9.1579 -1.8460 34 1 1.6566 -2.1320 0.0005 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299712355.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:00:23 Heat of formation + Delta-G solvation = -63.572314 kcal Electronic energy + Delta-G solvation = -19609.577636 eV Core-core repulsion = 16340.478037 eV Total energy + Delta-G solvation = -3269.099599 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -40.38139 -38.55256 -37.13095 -36.26986 -34.00778 -32.72088 -31.80257 -30.77332 -29.92815 -26.89801 -25.41699 -24.00464 -22.35376 -21.49766 -19.36438 -18.17218 -17.82075 -16.44086 -16.25097 -15.53967 -15.32859 -14.71071 -14.37843 -14.06617 -13.90640 -13.66226 -13.40608 -13.28435 -12.73698 -12.59562 -12.49698 -11.99026 -11.82292 -11.63282 -11.50716 -11.22418 -11.11393 -10.93538 -10.68711 -10.58933 -10.38177 -10.29571 -9.60587 -8.82333 -8.45140 -8.06933 -8.03018 -6.49960 -3.91229 1.07996 1.31492 2.34853 3.11989 3.13999 3.24722 3.33759 3.55022 3.74413 4.14331 4.62641 4.64949 4.81982 4.90402 5.08999 5.11218 5.17704 5.37028 5.40323 5.43064 5.47958 5.59276 5.73367 5.83716 5.87127 6.04460 6.09700 6.16642 6.35656 6.42260 6.63213 7.46003 7.48741 7.95766 8.50154 9.08684 9.40636 9.91352 10.67534 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.023297 B = 0.004240 C = 0.003728 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1201.565205 B = 6601.752542 C = 7509.839450 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.043 4.043 3 C -0.158 4.158 4 C -0.070 4.070 5 C -0.079 4.079 6 Cl -0.056 7.056 7 C 0.154 3.846 8 O -0.267 6.267 9 C 0.073 3.927 10 H 0.085 0.915 11 C -0.172 4.172 12 C 0.444 3.556 13 O -0.569 6.569 14 N -0.554 5.554 15 C -0.300 4.300 16 H 0.106 0.894 17 C 0.025 3.975 18 N -0.899 5.899 19 Si 0.931 3.069 20 H -0.267 1.267 21 H -0.280 1.280 22 H -0.280 1.280 23 C -0.206 4.206 24 H 0.074 0.926 25 H 0.069 0.931 26 H 0.068 0.932 27 H 0.129 0.871 28 H 0.136 0.864 29 H 0.063 0.937 30 H 0.081 0.919 31 H 0.072 0.928 32 H 0.393 0.607 33 H 0.273 0.727 34 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.780 15.948 4.625 17.936 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.043 4.043 3 C -0.176 4.176 4 C -0.089 4.089 5 C -0.106 4.106 6 Cl -0.027 7.027 7 C 0.106 3.894 8 O -0.178 6.178 9 C 0.013 3.987 10 H 0.102 0.898 11 C -0.230 4.230 12 C 0.229 3.771 13 O -0.452 6.452 14 N -0.191 5.191 15 C -0.429 4.429 16 H 0.124 0.876 17 C -0.177 4.177 18 N -0.540 5.540 19 Si 0.758 3.242 20 H -0.191 1.191 21 H -0.206 1.206 22 H -0.206 1.206 23 C -0.225 4.225 24 H 0.093 0.907 25 H 0.088 0.912 26 H 0.087 0.913 27 H 0.147 0.853 28 H 0.154 0.846 29 H 0.082 0.918 30 H 0.100 0.900 31 H 0.091 0.909 32 H 0.227 0.773 33 H 0.082 0.918 34 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -5.710 15.845 4.469 17.426 hybrid contribution -0.221 -0.897 -0.277 0.965 sum -5.931 14.948 4.193 16.619 Atomic orbital electron populations 1.20833 0.90693 1.03043 1.02723 1.19778 0.96259 0.92348 0.95915 1.20815 0.93158 0.97768 1.05882 1.20847 0.94108 0.95948 0.97981 1.20199 0.85645 0.92304 1.12498 1.98374 1.08423 1.98850 1.97066 1.18855 0.90368 0.86128 0.94022 1.86348 1.34408 1.11056 1.85958 1.22308 0.94188 0.84106 0.98127 0.89756 1.22322 1.02331 1.02369 0.95986 1.19277 0.88537 0.83694 0.85637 1.90582 1.15979 1.81044 1.57570 1.41721 1.11972 1.09994 1.55417 1.19781 0.94953 0.90610 1.37574 0.87633 1.25273 0.96220 0.98621 0.97590 1.69612 1.11078 1.25227 1.48111 0.85767 0.79992 0.80029 0.78399 1.19097 1.20636 1.20640 1.21225 0.92248 0.99547 1.09510 0.90700 0.91191 0.91264 0.85320 0.84605 0.91806 0.90026 0.90852 0.77336 0.91758 0.84249 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.93 10.01 36.00 0.36 -0.56 16 2 C -0.04 -0.47 5.88 -104.64 -0.62 -1.09 16 3 C -0.16 -1.64 9.70 -39.56 -0.38 -2.02 16 4 C -0.07 -0.82 9.83 -39.57 -0.39 -1.21 16 5 C -0.08 -1.19 6.33 -39.36 -0.25 -1.44 16 6 Cl -0.06 -0.89 28.50 -51.86 -1.48 -2.37 16 7 C 0.15 2.51 6.59 -39.19 -0.26 2.25 16 8 O -0.27 -5.21 8.80 -39.36 -0.35 -5.56 16 9 C 0.07 1.35 2.63 -27.88 -0.07 1.28 16 10 H 0.08 1.38 6.31 -51.93 -0.33 1.05 16 11 C -0.17 -2.66 9.13 37.16 0.34 -2.32 16 12 C 0.44 10.77 7.13 -10.99 -0.08 10.70 16 13 O -0.57 -16.27 16.08 -14.32 -0.23 -16.50 16 14 N -0.55 -13.84 5.25 -10.97 -0.06 -13.90 16 15 C -0.30 -8.28 9.68 -14.93 -0.14 -8.42 16 16 H 0.11 3.08 7.16 -52.49 -0.38 2.70 16 17 C 0.02 0.66 5.50 -17.47 -0.10 0.56 16 18 N -0.90 -23.81 13.05 55.50 0.72 -23.08 16 19 Si 0.93 20.74 29.55 -169.99 -5.02 15.72 16 20 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 21 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 22 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 23 C -0.21 -2.76 7.90 -39.44 -0.31 -3.07 16 24 H 0.07 0.55 8.14 -51.93 -0.42 0.13 16 25 H 0.07 0.52 8.08 -51.93 -0.42 0.10 16 26 H 0.07 0.44 8.09 -51.93 -0.42 0.02 16 27 H 0.13 0.97 8.06 -52.49 -0.42 0.55 16 28 H 0.14 1.27 8.06 -52.49 -0.42 0.84 16 29 H 0.06 0.81 6.91 -51.93 -0.36 0.45 16 30 H 0.08 1.20 7.93 -51.93 -0.41 0.78 16 31 H 0.07 1.21 8.14 -51.93 -0.42 0.79 16 32 H 0.39 9.19 7.68 -40.82 -0.31 8.87 16 33 H 0.27 6.80 8.31 -40.82 -0.34 6.46 16 34 H 0.14 1.70 5.43 -52.49 -0.29 1.41 16 LS Contribution 311.16 15.07 4.69 4.69 Total: -1.00 -31.87 311.16 -7.36 -39.23 By element: Atomic # 1 Polarization: 10.87 SS G_CDS: -3.74 Total: 7.13 kcal Atomic # 6 Polarization: -3.46 SS G_CDS: -1.90 Total: -5.36 kcal Atomic # 7 Polarization: -37.65 SS G_CDS: 0.67 Total: -36.98 kcal Atomic # 8 Polarization: -21.48 SS G_CDS: -0.58 Total: -22.06 kcal Atomic # 14 Polarization: 20.74 SS G_CDS: -5.02 Total: 15.72 kcal Atomic # 17 Polarization: -0.89 SS G_CDS: -1.48 Total: -2.37 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -31.87 -7.36 -39.23 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299712355.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.338 kcal (2) G-P(sol) polarization free energy of solvation -31.874 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.212 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.360 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.235 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.572 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds