Wall clock time and date at job start Tue Mar 31 2020 05:57:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.38279 * 120.03568 * 2 1 4 4 Cl 1.73599 * 119.98504 * 359.97438 * 3 2 1 5 5 C 1.38362 * 120.02725 * 180.25403 * 3 2 1 6 6 C 1.38269 * 120.09983 * 359.44711 * 5 3 2 7 7 C 1.38134 * 120.06508 * 0.55309 * 6 5 3 8 8 C 1.38682 * 120.02962 * 179.97438 * 2 1 3 9 9 O 1.35901 * 120.05142 * 359.97438 * 8 2 1 10 10 C 1.42900 * 116.99754 * 179.97438 * 9 8 2 11 11 C 1.50704 * 109.46799 * 180.02562 * 10 9 8 12 12 O 1.21287 * 120.00145 * 0.02562 * 11 10 9 13 13 N 1.34775 * 119.99839 * 180.02562 * 11 10 9 14 14 C 1.46503 * 120.00284 * 359.97438 * 13 11 10 15 15 C 1.37101 * 119.99916 * 180.02562 * 13 11 10 16 16 H 1.08001 * 120.00417 * 24.38418 * 15 13 11 17 17 C 1.38950 * 119.99819 * 204.39169 * 15 13 11 18 18 N 1.31409 * 120.00075 * 12.65206 * 17 15 13 19 19 Si 1.86807 * 119.99844 * 192.65450 * 17 15 13 20 20 H 1.48497 * 109.47202 * 359.97438 * 19 17 15 21 21 H 1.48501 * 109.47038 * 119.99998 * 19 17 15 22 22 H 1.48501 * 109.46746 * 239.99710 * 19 17 15 23 23 H 1.08998 * 109.47137 * 89.99420 * 1 2 3 24 24 H 1.08992 * 109.47153 * 210.00173 * 1 2 3 25 25 H 1.09000 * 109.46933 * 329.99895 * 1 2 3 26 26 H 1.08004 * 119.95142 * 179.72403 * 5 3 2 27 27 H 1.07994 * 119.96983 * 180.25192 * 6 5 3 28 28 H 1.07996 * 120.01067 * 179.70048 * 7 6 5 29 29 H 1.08999 * 109.47810 * 300.00245 * 10 9 8 30 30 H 1.09001 * 109.46850 * 60.01083 * 10 9 8 31 31 H 1.09002 * 109.46572 * 85.87135 * 14 13 11 32 32 H 1.09004 * 109.47135 * 205.86704 * 14 13 11 33 33 H 1.08998 * 109.47172 * 325.87268 * 14 13 11 34 34 H 0.97004 * 120.00027 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1992 1.1971 0.0000 4 17 1.3318 2.7008 -0.0007 5 6 3.5828 1.1969 -0.0053 6 6 4.2761 0.0006 0.0009 7 6 3.5887 -1.1976 0.0009 8 6 2.2011 -1.2007 0.0005 9 8 1.5233 -2.3786 0.0016 10 6 2.3033 -3.5759 0.0015 11 6 1.3869 -4.7723 0.0021 12 8 0.1843 -4.6151 0.0021 13 7 1.9039 -6.0170 0.0027 14 6 3.3565 -6.2069 0.0022 15 6 1.0702 -7.1055 0.0027 16 1 0.0657 -7.0164 -0.3838 17 6 1.5177 -8.3232 0.5002 18 7 2.6336 -8.3803 1.1919 19 14 0.5331 -9.8793 0.1857 20 1 -0.6748 -9.5479 -0.6121 21 1 1.3697 -10.8516 -0.5626 22 1 0.1215 -10.4750 1.4821 23 1 -0.3633 0.0001 -1.0276 24 1 -0.3633 -0.8899 0.5138 25 1 -0.3633 0.8900 0.5139 26 1 4.1222 2.1326 -0.0098 27 1 5.3560 0.0029 0.0009 28 1 4.1311 -2.1315 0.0009 29 1 2.9315 -3.6003 -0.8889 30 1 2.9327 -3.5995 0.8911 31 1 3.7268 -6.1800 1.0270 32 1 3.5967 -7.1713 -0.4457 33 1 3.8268 -5.4109 -0.5751 34 1 2.9462 -9.2305 1.5389 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000346202430.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:57:53 Heat of formation + Delta-G solvation = -46.507197 kcal Electronic energy + Delta-G solvation = -19523.506283 eV Core-core repulsion = 16255.146684 eV Total energy + Delta-G solvation = -3268.359600 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -40.30610 -38.59600 -37.35478 -36.26461 -34.70908 -32.84736 -31.77126 -30.04372 -28.31632 -26.75385 -26.18505 -24.35487 -22.30860 -21.68804 -19.24720 -18.09273 -16.97681 -16.39390 -16.01154 -15.83719 -15.61214 -14.92606 -14.56351 -14.24849 -14.10952 -13.47399 -13.42646 -13.12444 -12.38995 -12.36839 -12.21938 -11.97727 -11.59741 -11.50561 -11.41726 -11.36297 -11.24912 -10.96220 -10.76000 -10.74546 -10.36984 -10.34548 -9.11130 -8.75736 -8.50372 -8.15213 -7.78297 -6.42098 -3.98912 1.04917 1.29651 1.96410 3.10100 3.17406 3.23518 3.33299 3.54453 3.72164 4.11402 4.64697 4.78143 4.87097 4.96357 5.01105 5.11492 5.29462 5.39103 5.51783 5.61137 5.66152 5.68828 5.82774 6.12003 6.15463 6.22030 6.27061 6.38053 6.55146 6.69971 7.05641 7.44370 7.48879 8.03157 8.37867 9.07685 9.27693 9.82855 10.63057 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.041098 B = 0.003427 C = 0.003193 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 681.132656 B = 8167.928721 C = 8766.588148 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.110 4.110 3 C -0.001 4.001 4 Cl -0.067 7.067 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.150 3.850 9 O -0.278 6.278 10 C 0.050 3.950 11 C 0.447 3.553 12 O -0.566 6.566 13 N -0.441 5.441 14 C 0.107 3.893 15 C -0.306 4.306 16 H 0.101 0.899 17 C 0.032 3.968 18 N -0.881 5.881 19 Si 0.929 3.071 20 H -0.267 1.267 21 H -0.280 1.280 22 H -0.280 1.280 23 H 0.072 0.928 24 H 0.081 0.919 25 H 0.068 0.932 26 H 0.131 0.869 27 H 0.133 0.867 28 H 0.136 0.864 29 H 0.078 0.922 30 H 0.081 0.919 31 H 0.055 0.945 32 H 0.079 0.921 33 H 0.024 0.976 34 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.918 15.349 -2.249 16.603 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.111 4.111 3 C -0.028 4.028 4 Cl -0.038 7.038 5 C -0.173 4.173 6 C -0.092 4.092 7 C -0.224 4.224 8 C 0.102 3.898 9 O -0.189 6.189 10 C -0.028 4.028 11 C 0.234 3.766 12 O -0.449 6.449 13 N -0.161 5.161 14 C -0.037 4.037 15 C -0.434 4.434 16 H 0.119 0.881 17 C -0.172 4.172 18 N -0.520 5.520 19 Si 0.755 3.245 20 H -0.191 1.191 21 H -0.206 1.206 22 H -0.206 1.206 23 H 0.091 0.909 24 H 0.100 0.900 25 H 0.087 0.913 26 H 0.149 0.851 27 H 0.151 0.849 28 H 0.154 0.846 29 H 0.095 0.905 30 H 0.099 0.901 31 H 0.073 0.927 32 H 0.098 0.902 33 H 0.043 0.957 34 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 5.136 15.341 -2.157 16.321 hybrid contribution 0.169 -0.807 0.007 0.825 sum 5.304 14.533 -2.150 15.620 Atomic orbital electron populations 1.20701 0.89459 1.03606 1.02974 1.19005 0.97373 0.88880 1.05886 1.20452 0.92029 0.86078 1.04222 1.98347 1.77207 1.31448 1.96820 1.20855 0.91690 0.99103 1.05646 1.20831 0.99904 0.91032 0.97394 1.21438 0.93054 0.99954 1.08004 1.18769 0.90213 0.86149 0.94649 1.86207 1.34427 1.11183 1.87090 1.22682 0.94435 0.83524 1.02168 1.19490 0.88639 0.83407 0.85096 1.90566 1.14967 1.85017 1.54357 1.43472 1.06005 1.03678 1.62986 1.21566 0.80880 1.00458 1.00791 1.19718 0.98180 0.86296 1.39200 0.88149 1.25376 0.97028 0.99857 0.94919 1.69989 1.22285 1.26656 1.33064 0.85822 0.79665 0.80691 0.78317 1.19096 1.20569 1.20634 0.90914 0.90017 0.91304 0.85097 0.84932 0.84629 0.90455 0.90130 0.92673 0.90216 0.95727 0.92136 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.55 9.39 36.01 0.34 -1.22 16 2 C -0.11 -1.61 5.90 -104.44 -0.62 -2.22 16 3 C 0.00 -0.01 6.31 -39.52 -0.25 -0.26 16 4 Cl -0.07 -0.75 27.29 -51.86 -1.42 -2.17 16 5 C -0.15 -1.70 9.83 -39.52 -0.39 -2.09 16 6 C -0.07 -0.79 10.04 -39.61 -0.40 -1.19 16 7 C -0.21 -2.66 9.04 -39.42 -0.36 -3.01 16 8 C 0.15 2.35 6.66 -39.22 -0.26 2.08 16 9 O -0.28 -5.27 8.71 -39.34 -0.34 -5.61 16 10 C 0.05 0.93 3.83 36.01 0.14 1.06 16 11 C 0.45 10.89 7.70 -10.98 -0.08 10.81 16 12 O -0.57 -16.07 16.21 -14.36 -0.23 -16.30 16 13 N -0.44 -11.03 3.01 -122.19 -0.37 -11.39 16 14 C 0.11 2.24 8.44 59.85 0.51 2.75 16 15 C -0.31 -8.40 9.24 -14.93 -0.14 -8.53 16 16 H 0.10 2.89 7.45 -52.49 -0.39 2.50 16 17 C 0.03 0.82 5.04 -17.47 -0.09 0.73 16 18 N -0.88 -22.81 10.84 55.50 0.60 -22.21 16 19 Si 0.93 20.30 29.57 -169.99 -5.03 15.27 16 20 H -0.27 -5.86 7.11 56.52 0.40 -5.46 16 21 H -0.28 -5.94 7.11 56.52 0.40 -5.54 16 22 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 23 H 0.07 0.97 8.14 -51.93 -0.42 0.55 16 24 H 0.08 1.29 7.53 -51.93 -0.39 0.90 16 25 H 0.07 0.84 6.90 -51.93 -0.36 0.49 16 26 H 0.13 1.14 8.06 -52.48 -0.42 0.72 16 27 H 0.13 1.03 8.06 -52.49 -0.42 0.61 16 28 H 0.14 1.55 6.30 -52.49 -0.33 1.22 16 29 H 0.08 1.21 6.93 -51.93 -0.36 0.85 16 30 H 0.08 1.32 7.63 -51.93 -0.40 0.92 16 31 H 0.05 1.18 7.83 -51.93 -0.41 0.77 16 32 H 0.08 1.78 6.80 -51.93 -0.35 1.42 16 33 H 0.02 0.41 6.61 -51.93 -0.34 0.06 16 34 H 0.27 6.56 8.31 -40.82 -0.34 6.22 16 LS Contribution 304.92 15.07 4.60 4.60 Total: -1.00 -30.88 304.92 -7.52 -38.40 By element: Atomic # 1 Polarization: 4.24 SS G_CDS: -3.73 Total: 0.51 kcal Atomic # 6 Polarization: 0.51 SS G_CDS: -1.60 Total: -1.09 kcal Atomic # 7 Polarization: -33.84 SS G_CDS: 0.23 Total: -33.60 kcal Atomic # 8 Polarization: -21.34 SS G_CDS: -0.58 Total: -21.92 kcal Atomic # 14 Polarization: 20.30 SS G_CDS: -5.03 Total: 15.27 kcal Atomic # 17 Polarization: -0.75 SS G_CDS: -1.42 Total: -2.17 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -30.88 -7.52 -38.40 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000346202430.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.110 kcal (2) G-P(sol) polarization free energy of solvation -30.877 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.987 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.520 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds