Wall clock time and date at job start Tue Mar 31 2020 05:57:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38286 * 120.03227 * 2 1 4 4 Cl 1.73599 * 119.98567 * 359.97310 * 3 2 1 5 5 C 1.38366 * 120.02492 * 180.25304 * 3 2 1 6 6 C 1.38273 * 120.09750 * 359.44986 * 5 3 2 7 7 C 1.38132 * 120.06795 * 0.54330 * 6 5 3 8 8 C 1.38687 * 120.03354 * 179.97438 * 2 1 3 9 9 O 1.35897 * 120.04805 * 0.02562 * 8 2 1 10 10 C 1.42900 * 116.99820 * 179.97438 * 9 8 2 11 11 C 1.50700 * 109.47156 * 179.97438 * 10 9 8 12 12 O 1.21282 * 119.99826 * 359.97438 * 11 10 9 13 13 N 1.34778 * 120.00307 * 179.97438 * 11 10 9 14 14 C 1.46494 * 120.00192 * 179.97438 * 13 11 10 15 15 C 1.50698 * 109.47334 * 179.97438 * 14 13 11 16 16 H 1.08007 * 120.00043 * 359.97438 * 15 14 13 17 17 C 1.37879 * 120.00476 * 180.02562 * 15 14 13 18 18 N 1.31514 * 120.00161 * 180.02562 * 17 15 14 19 19 Si 1.86795 * 119.99699 * 359.97438 * 17 15 14 20 20 H 1.48497 * 109.47244 * 90.00125 * 19 17 15 21 21 H 1.48503 * 109.47289 * 210.00106 * 19 17 15 22 22 H 1.48505 * 109.47354 * 330.00199 * 19 17 15 23 23 H 1.09003 * 109.46968 * 90.00072 * 1 2 3 24 24 H 1.09002 * 109.47420 * 210.00280 * 1 2 3 25 25 H 1.08998 * 109.47420 * 330.00092 * 1 2 3 26 26 H 1.07995 * 119.94658 * 179.72273 * 5 3 2 27 27 H 1.08000 * 119.95923 * 180.25608 * 6 5 3 28 28 H 1.07996 * 120.01303 * 179.70589 * 7 6 5 29 29 H 1.09001 * 109.47003 * 299.99061 * 10 9 8 30 30 H 1.08995 * 109.47287 * 59.99829 * 10 9 8 31 31 H 0.96996 * 119.99530 * 359.97438 * 13 11 10 32 32 H 1.08998 * 109.47302 * 300.00082 * 14 13 11 33 33 H 1.09008 * 109.47219 * 60.00083 * 14 13 11 34 34 H 0.96999 * 119.99523 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1991 1.1972 0.0000 4 17 1.3316 2.7009 -0.0007 5 6 3.5828 1.1970 -0.0053 6 6 4.2760 0.0007 0.0009 7 6 3.5887 -1.1975 0.0011 8 6 2.2011 -1.2007 0.0005 9 8 1.5233 -2.3785 0.0005 10 6 2.3034 -3.5759 0.0005 11 6 1.3871 -4.7723 0.0012 12 8 0.1845 -4.6151 0.0021 13 7 1.9040 -6.0170 0.0008 14 6 1.0133 -7.1801 0.0019 15 6 1.8358 -8.4428 0.0006 16 1 2.9143 -8.3848 -0.0015 17 6 1.2117 -9.6722 0.0008 18 7 1.9296 -10.7742 0.0001 19 14 -0.6535 -9.7727 0.0036 20 1 -1.1500 -9.7985 -1.3957 21 1 -1.0816 -11.0104 0.7036 22 1 -1.2120 -8.5889 0.7051 23 1 -0.3633 0.0000 -1.0277 24 1 -0.3634 -0.8900 0.5139 25 1 -0.3634 0.8900 0.5138 26 1 4.1220 2.1327 -0.0098 27 1 5.3560 0.0032 0.0009 28 1 4.1311 -2.1314 0.0011 29 1 2.9321 -3.5999 -0.8895 30 1 2.9322 -3.5998 0.8905 31 1 2.8658 -6.1427 -0.0003 32 1 0.3854 -7.1560 0.8926 33 1 0.3834 -7.1563 -0.8874 34 1 1.4904 -11.6390 0.0006 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000427645161.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:57:57 Heat of formation + Delta-G solvation = -61.688020 kcal Electronic energy + Delta-G solvation = -18922.113986 eV Core-core repulsion = 15653.096097 eV Total energy + Delta-G solvation = -3269.017889 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.62743 -39.06674 -37.66441 -36.46825 -34.42675 -33.08111 -32.46248 -30.37803 -29.31348 -27.30370 -26.81212 -22.98617 -21.99911 -21.81287 -20.09336 -18.42156 -17.60337 -16.56445 -16.41562 -16.04871 -15.86006 -15.23913 -14.96072 -14.62711 -14.24600 -13.80788 -13.65063 -13.35143 -12.77495 -12.61126 -12.55359 -12.44377 -12.36905 -11.80155 -11.70161 -11.53469 -11.09822 -11.06266 -10.97729 -10.81516 -10.02959 -9.58257 -9.38094 -8.96504 -8.85254 -8.43340 -8.30857 -6.27720 -4.30977 0.82965 1.06041 1.77036 2.75593 2.97719 3.23216 3.30407 3.32011 3.38043 4.00730 4.28146 4.42049 4.63134 4.70845 4.77287 5.02446 5.02564 5.07199 5.08220 5.18247 5.38342 5.47546 5.62133 5.90038 6.00778 6.04279 6.14057 6.29961 6.68994 6.97197 7.01365 7.14398 7.28020 8.00722 8.36788 8.63996 8.75698 9.31465 10.83998 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.041812 B = 0.002921 C = 0.002737 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 669.505444 B = 9584.359088 C =10228.114532 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.106 4.106 3 C -0.002 4.002 4 Cl -0.063 7.063 5 C -0.149 4.149 6 C -0.073 4.073 7 C -0.204 4.204 8 C 0.145 3.855 9 O -0.280 6.280 10 C 0.039 3.961 11 C 0.502 3.498 12 O -0.534 6.534 13 N -0.700 5.700 14 C 0.222 3.778 15 C -0.546 4.546 16 H 0.080 0.920 17 C 0.079 3.921 18 N -0.891 5.891 19 Si 0.877 3.123 20 H -0.272 1.272 21 H -0.283 1.283 22 H -0.260 1.260 23 H 0.074 0.926 24 H 0.080 0.920 25 H 0.070 0.930 26 H 0.133 0.867 27 H 0.135 0.865 28 H 0.137 0.863 29 H 0.092 0.908 30 H 0.092 0.908 31 H 0.398 0.602 32 H 0.028 0.972 33 H 0.023 0.977 34 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.832 23.880 0.026 24.364 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.108 4.108 3 C -0.028 4.028 4 Cl -0.034 7.034 5 C -0.168 4.168 6 C -0.091 4.091 7 C -0.222 4.222 8 C 0.098 3.902 9 O -0.191 6.191 10 C -0.040 4.040 11 C 0.285 3.715 12 O -0.411 6.411 13 N -0.350 5.350 14 C 0.101 3.899 15 C -0.584 4.584 16 H 0.098 0.902 17 C -0.125 4.125 18 N -0.527 5.527 19 Si 0.703 3.297 20 H -0.198 1.198 21 H -0.208 1.208 22 H -0.185 1.185 23 H 0.092 0.908 24 H 0.099 0.901 25 H 0.089 0.911 26 H 0.151 0.849 27 H 0.153 0.847 28 H 0.155 0.845 29 H 0.110 0.890 30 H 0.110 0.890 31 H 0.232 0.768 32 H 0.046 0.954 33 H 0.041 0.959 34 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 3.638 23.843 0.031 24.119 hybrid contribution -0.094 -0.273 -0.036 0.290 sum 3.544 23.570 -0.005 23.835 Atomic orbital electron populations 1.20720 0.89364 1.03685 1.03104 1.19010 0.97409 0.88843 1.05515 1.20482 0.92098 0.86271 1.03986 1.98360 1.77096 1.31189 1.96760 1.20917 0.91715 0.99266 1.04882 1.20859 1.00070 0.90988 0.97212 1.21414 0.92846 1.00046 1.07943 1.18673 0.90197 0.85663 0.95664 1.86183 1.34097 1.11108 1.87760 1.22649 0.94246 0.83376 1.03686 1.19878 0.88944 0.84129 0.78499 1.90711 1.15083 1.85880 1.49416 1.46053 1.11253 1.05077 1.72639 1.19552 0.90541 0.82774 0.97082 1.21052 0.95046 0.88577 1.53751 0.90154 1.24786 0.98711 0.95299 0.93753 1.69873 1.35968 0.97803 1.49103 0.86820 0.85426 0.78345 0.79140 1.19768 1.20815 1.18453 0.90769 0.90107 0.91129 0.84896 0.84737 0.84549 0.89005 0.89018 0.76807 0.95429 0.95891 0.92155 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.31 9.39 36.01 0.34 -0.97 16 2 C -0.11 -1.28 5.90 -104.44 -0.62 -1.90 16 3 C 0.00 -0.02 6.31 -39.52 -0.25 -0.27 16 4 Cl -0.06 -0.60 27.29 -51.86 -1.42 -2.02 16 5 C -0.15 -1.34 9.83 -39.52 -0.39 -1.73 16 6 C -0.07 -0.61 10.04 -39.61 -0.40 -1.01 16 7 C -0.20 -2.01 9.04 -39.43 -0.36 -2.36 16 8 C 0.14 1.80 6.66 -39.22 -0.26 1.54 16 9 O -0.28 -4.12 8.71 -39.33 -0.34 -4.47 16 10 C 0.04 0.51 5.22 36.01 0.19 0.69 16 11 C 0.50 9.19 7.91 -10.98 -0.09 9.10 16 12 O -0.53 -12.16 16.50 -14.35 -0.24 -12.40 16 13 N -0.70 -13.29 5.55 -61.47 -0.34 -13.63 16 14 C 0.22 5.28 4.50 -5.20 -0.02 5.25 16 15 C -0.55 -14.51 9.83 -34.44 -0.34 -14.85 16 16 H 0.08 2.20 7.84 -52.48 -0.41 1.79 16 17 C 0.08 2.18 5.47 -17.82 -0.10 2.08 16 18 N -0.89 -25.91 13.96 55.43 0.77 -25.13 16 19 Si 0.88 21.01 27.47 -169.99 -4.67 16.35 16 20 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 21 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 22 H -0.26 -6.20 6.54 56.52 0.37 -5.83 16 23 H 0.07 0.83 8.14 -51.93 -0.42 0.41 16 24 H 0.08 1.06 7.53 -51.93 -0.39 0.67 16 25 H 0.07 0.72 6.90 -51.93 -0.36 0.36 16 26 H 0.13 0.92 8.06 -52.49 -0.42 0.50 16 27 H 0.13 0.76 8.06 -52.49 -0.42 0.34 16 28 H 0.14 1.06 6.30 -52.49 -0.33 0.73 16 29 H 0.09 0.93 7.66 -51.93 -0.40 0.53 16 30 H 0.09 0.93 7.66 -51.93 -0.40 0.53 16 31 H 0.40 6.35 8.32 -40.82 -0.34 6.01 16 32 H 0.03 0.69 7.20 -51.93 -0.37 0.32 16 33 H 0.02 0.57 7.57 -51.92 -0.39 0.18 16 34 H 0.27 7.31 8.31 -40.82 -0.34 6.97 16 LS Contribution 309.88 15.07 4.67 4.67 Total: -1.00 -32.17 309.88 -7.68 -39.85 By element: Atomic # 1 Polarization: 5.04 SS G_CDS: -3.83 Total: 1.21 kcal Atomic # 6 Polarization: -2.14 SS G_CDS: -2.29 Total: -4.42 kcal Atomic # 7 Polarization: -39.20 SS G_CDS: 0.43 Total: -38.77 kcal Atomic # 8 Polarization: -16.29 SS G_CDS: -0.58 Total: -16.87 kcal Atomic # 14 Polarization: 21.01 SS G_CDS: -4.67 Total: 16.35 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.42 Total: -2.02 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -32.17 -7.68 -39.85 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000427645161.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.837 kcal (2) G-P(sol) polarization free energy of solvation -32.172 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.009 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.679 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.851 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.688 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds