Wall clock time and date at job start Tue Mar 31 2020 06:07:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52990 * 1 3 3 O 1.42901 * 109.47342 * 2 1 4 4 C 1.50702 * 109.47659 * 239.99932 * 2 1 3 5 5 O 1.21275 * 119.99896 * 265.11860 * 4 2 1 6 6 N 1.34771 * 119.99771 * 85.10979 * 4 2 1 7 7 C 1.46505 * 119.99658 * 180.02562 * 6 4 2 8 8 C 1.50707 * 109.46919 * 180.02562 * 7 6 4 9 9 H 1.08004 * 119.99907 * 359.97438 * 8 7 6 10 10 C 1.37874 * 119.99621 * 179.97438 * 8 7 6 11 11 N 1.31515 * 120.00609 * 0.02562 * 10 8 7 12 12 Si 1.86804 * 119.99607 * 179.97438 * 10 8 7 13 13 H 1.48499 * 109.47434 * 359.97438 * 12 10 8 14 14 H 1.48502 * 109.47028 * 120.00024 * 12 10 8 15 15 H 1.48506 * 109.47136 * 239.99720 * 12 10 8 16 16 C 1.50703 * 109.47251 * 119.99908 * 2 1 3 17 17 C 1.38246 * 119.98572 * 52.08781 * 16 2 1 18 18 C 1.38214 * 120.01362 * 179.72808 * 17 16 2 19 19 C 1.38350 * 119.98332 * 0.54864 * 18 17 16 20 20 Cl 1.73602 * 120.01373 * 179.70265 * 19 18 17 21 21 C 1.38351 * 119.97814 * 359.72875 * 19 18 17 22 22 C 1.38219 * 119.98538 * 359.97438 * 21 19 18 23 23 H 1.09005 * 109.47556 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.47088 * 60.00122 * 1 2 3 25 25 H 1.09005 * 109.47391 * 300.00282 * 1 2 3 26 26 H 0.96701 * 114.00406 * 179.97438 * 3 2 1 27 27 H 0.97001 * 120.00450 * 0.02562 * 6 4 2 28 28 H 1.08997 * 109.46829 * 299.99660 * 7 6 4 29 29 H 1.08996 * 109.47180 * 60.00674 * 7 6 4 30 30 H 0.96995 * 120.00173 * 180.02562 * 11 10 8 31 31 H 1.07997 * 119.98836 * 0.02562 * 17 16 2 32 32 H 1.07996 * 120.00714 * 180.27082 * 18 17 16 33 33 H 1.07998 * 120.01314 * 179.97438 * 21 19 18 34 34 H 1.08000 * 119.99652 * 180.02562 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.0324 -0.7104 -1.2304 5 8 2.3188 -1.8876 -1.1764 6 7 2.1632 -0.0375 -2.3908 7 6 2.6512 -0.7283 -3.5871 8 6 2.7052 0.2409 -4.7398 9 1 2.4056 1.2685 -4.5959 10 6 3.1371 -0.1843 -5.9782 11 7 3.5014 -1.4357 -6.1537 12 14 3.2033 1.0169 -7.4073 13 1 2.7426 2.3534 -6.9525 14 1 4.5987 1.1170 -7.9055 15 1 2.3209 0.5351 -8.5003 16 6 2.0323 -0.7104 1.2305 17 6 1.5689 -1.9769 1.5347 18 6 2.0335 -2.6312 2.6600 19 6 2.9539 -2.0139 3.4882 20 17 3.5321 -2.8319 4.9060 21 6 3.4129 -0.7441 3.1864 22 6 2.9522 -0.0932 2.0574 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 0.5139 0.8900 26 1 2.9703 1.4237 0.0004 27 1 1.9344 0.9041 -2.4339 28 1 3.6495 -1.1224 -3.3972 29 1 1.9772 -1.5488 -3.8331 30 1 3.8056 -1.7347 -7.0248 31 1 0.8474 -2.4569 0.8903 32 1 1.6747 -3.6223 2.8952 33 1 4.1311 -0.2615 3.8327 34 1 3.3108 0.8978 1.8214 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000816509825.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:07:43 Heat of formation + Delta-G solvation = -75.792900 kcal Electronic energy + Delta-G solvation = -19626.247775 eV Core-core repulsion = 16356.618253 eV Total energy + Delta-G solvation = -3269.629523 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.46972 -38.58266 -36.88067 -36.27286 -34.31907 -32.35009 -32.26336 -31.03542 -29.35360 -27.36434 -24.53382 -22.99167 -22.78422 -21.30693 -19.69677 -18.39351 -17.62722 -16.30566 -15.92447 -15.69585 -15.09637 -14.72148 -14.65893 -14.46731 -13.69780 -13.58792 -13.30140 -13.20904 -12.75996 -12.32273 -12.25036 -11.98796 -11.87203 -11.74999 -11.58958 -11.40188 -10.99746 -10.95272 -10.91720 -10.71529 -10.34501 -9.43477 -9.15998 -8.99114 -8.79392 -8.61203 -7.98346 -6.21140 -4.28363 1.01029 1.23915 2.00574 3.09658 3.21078 3.28379 3.31447 3.45153 3.92554 4.08585 4.31634 4.51326 4.67792 4.78675 5.07558 5.15354 5.25568 5.28248 5.38391 5.55036 5.67518 5.73644 5.86092 6.01243 6.10681 6.16767 6.42584 6.68512 7.18174 7.28270 7.40591 7.43380 7.62565 7.90931 8.52194 8.69704 8.96629 9.38419 10.88992 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.032074 B = 0.003472 C = 0.003351 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 872.769352 B = 8062.150798 C = 8352.845418 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C 0.157 3.843 3 O -0.545 6.545 4 C 0.475 3.525 5 O -0.543 6.543 6 N -0.698 5.698 7 C 0.248 3.752 8 C -0.543 4.543 9 H 0.064 0.936 10 C 0.064 3.936 11 N -0.885 5.885 12 Si 0.904 3.096 13 H -0.271 1.271 14 H -0.282 1.282 15 H -0.282 1.282 16 C -0.092 4.092 17 C -0.065 4.065 18 C -0.113 4.113 19 C -0.034 4.034 20 Cl -0.078 7.078 21 C -0.114 4.114 22 C -0.098 4.098 23 H 0.078 0.922 24 H 0.075 0.925 25 H 0.073 0.927 26 H 0.382 0.618 27 H 0.397 0.603 28 H 0.027 0.973 29 H 0.028 0.972 30 H 0.266 0.734 31 H 0.136 0.864 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.438 2.719 18.453 18.967 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C 0.113 3.887 3 O -0.351 6.351 4 C 0.257 3.743 5 O -0.422 6.422 6 N -0.347 5.347 7 C 0.128 3.872 8 C -0.582 4.582 9 H 0.083 0.917 10 C -0.140 4.140 11 N -0.523 5.523 12 Si 0.731 3.269 13 H -0.196 1.196 14 H -0.208 1.208 15 H -0.208 1.208 16 C -0.093 4.093 17 C -0.083 4.083 18 C -0.131 4.131 19 C -0.060 4.060 20 Cl -0.050 7.050 21 C -0.133 4.133 22 C -0.116 4.116 23 H 0.097 0.903 24 H 0.094 0.906 25 H 0.092 0.908 26 H 0.231 0.769 27 H 0.231 0.769 28 H 0.045 0.955 29 H 0.046 0.954 30 H 0.075 0.925 31 H 0.154 0.846 32 H 0.151 0.849 33 H 0.150 0.850 34 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -3.736 1.801 18.426 18.887 hybrid contribution 0.738 0.722 -0.795 1.303 sum -2.998 2.523 17.631 18.061 Atomic orbital electron populations 1.21750 0.89873 1.03421 1.03959 1.20285 0.96530 0.81652 0.90255 1.86557 1.27462 1.24351 1.96740 1.20885 0.79966 0.88027 0.85401 1.90691 1.50553 1.15805 1.85124 1.46470 1.63810 1.14128 1.10251 1.19170 0.95074 0.93074 0.79924 1.21255 1.46131 0.96457 0.94331 0.91738 1.24955 0.94734 0.95441 0.98869 1.69980 1.42937 1.15261 1.24099 0.86354 0.77842 0.80873 0.81821 1.19555 1.20771 1.20773 1.20180 0.97565 0.95492 0.96035 1.20944 0.99000 0.93364 0.95002 1.21030 0.97127 1.00456 0.94524 1.20941 0.99758 0.94433 0.90875 1.98358 1.88111 1.79108 1.39386 1.20931 1.00815 0.93382 0.98123 1.20876 0.96538 1.00175 0.94028 0.90317 0.90611 0.90764 0.76900 0.76949 0.95459 0.95406 0.92457 0.84636 0.84869 0.84955 0.84755 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.63 8.54 37.15 0.32 -1.31 16 2 C 0.16 2.22 1.16 -92.93 -0.11 2.12 16 3 O -0.54 -6.80 11.51 -35.23 -0.41 -7.21 16 4 C 0.47 9.01 6.68 -10.99 -0.07 8.94 16 5 O -0.54 -12.28 15.23 5.56 0.08 -12.19 16 6 N -0.70 -14.25 5.46 -61.47 -0.34 -14.58 16 7 C 0.25 6.42 5.43 -5.19 -0.03 6.39 16 8 C -0.54 -14.49 9.28 -34.44 -0.32 -14.81 16 9 H 0.06 1.62 7.60 -52.48 -0.40 1.22 16 10 C 0.06 1.74 5.46 -17.82 -0.10 1.65 16 11 N -0.89 -25.74 13.29 55.43 0.74 -25.00 16 12 Si 0.90 20.60 29.54 -169.99 -5.02 15.58 16 13 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 14 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 15 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 16 C -0.09 -1.24 4.56 -104.62 -0.48 -1.72 16 17 C -0.06 -0.87 8.01 -39.59 -0.32 -1.19 16 18 C -0.11 -1.38 9.83 -39.55 -0.39 -1.77 16 19 C -0.03 -0.40 6.32 -39.50 -0.25 -0.65 16 20 Cl -0.08 -0.85 28.96 -51.86 -1.50 -2.35 16 21 C -0.11 -1.28 9.83 -39.55 -0.39 -1.67 16 22 C -0.10 -1.15 9.24 -39.59 -0.37 -1.52 16 23 H 0.08 0.92 6.99 -51.93 -0.36 0.56 16 24 H 0.07 0.93 8.14 -51.93 -0.42 0.51 16 25 H 0.07 0.79 8.14 -51.93 -0.42 0.37 16 26 H 0.38 3.88 7.74 45.56 0.35 4.23 16 27 H 0.40 7.22 7.75 -40.82 -0.32 6.90 16 28 H 0.03 0.78 8.14 -51.93 -0.42 0.36 16 29 H 0.03 0.80 8.14 -51.93 -0.42 0.37 16 30 H 0.27 7.23 8.31 -40.82 -0.34 6.89 16 31 H 0.14 1.80 6.97 -52.49 -0.37 1.44 16 32 H 0.13 1.39 8.06 -52.49 -0.42 0.97 16 33 H 0.13 1.21 8.06 -52.49 -0.42 0.78 16 34 H 0.13 1.27 6.43 -52.49 -0.34 0.93 16 LS Contribution 310.10 15.07 4.67 4.67 Total: -1.00 -31.30 310.10 -7.36 -38.66 By element: Atomic # 1 Polarization: 11.08 SS G_CDS: -3.10 Total: 7.98 kcal Atomic # 6 Polarization: -3.07 SS G_CDS: -2.50 Total: -5.56 kcal Atomic # 7 Polarization: -39.99 SS G_CDS: 0.40 Total: -39.59 kcal Atomic # 8 Polarization: -19.08 SS G_CDS: -0.32 Total: -19.40 kcal Atomic # 14 Polarization: 20.60 SS G_CDS: -5.02 Total: 15.58 kcal Atomic # 17 Polarization: -0.85 SS G_CDS: -1.50 Total: -2.35 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -31.30 -7.36 -38.66 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000816509825.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.128 kcal (2) G-P(sol) polarization free energy of solvation -31.300 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.428 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.365 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.665 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds