Wall clock time and date at job start Tue Mar 31 2020 06:02:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38560 * 120.74340 * 2 1 4 4 C 1.38752 * 119.34301 * 179.97438 * 3 2 1 5 5 Cl 1.73607 * 119.56023 * 179.97438 * 4 3 2 6 6 N 1.31602 * 120.87797 * 359.74779 * 4 3 2 7 7 C 1.32781 * 121.61433 * 0.52197 * 6 4 3 8 8 C 1.48065 * 119.71474 * 179.75017 * 7 6 4 9 9 O 1.21433 * 120.00051 * 179.72648 * 8 7 6 10 10 O 1.34682 * 120.00131 * 359.44924 * 8 7 6 11 11 C 1.45196 * 117.00253 * 180.26982 * 10 8 7 12 12 C 1.52994 * 109.47253 * 180.02562 * 11 10 8 13 13 C 1.53004 * 109.46919 * 180.02562 * 12 11 10 14 14 C 1.50701 * 109.46859 * 180.02562 * 13 12 11 15 15 H 1.08005 * 120.00170 * 0.02562 * 14 13 12 16 16 C 1.37882 * 119.99945 * 180.02562 * 14 13 12 17 17 N 1.31513 * 120.00088 * 359.97438 * 16 14 13 18 18 Si 1.86805 * 119.99976 * 180.02562 * 16 14 13 19 19 H 1.48502 * 109.46702 * 59.99904 * 18 16 14 20 20 H 1.48501 * 109.46843 * 179.97438 * 18 16 14 21 21 H 1.48498 * 109.46999 * 299.99796 * 18 16 14 22 22 C 1.38618 * 120.74573 * 179.97438 * 2 1 3 23 23 H 1.09003 * 109.47310 * 270.01924 * 1 2 3 24 24 H 1.09004 * 109.47206 * 30.01900 * 1 2 3 25 25 H 1.08998 * 109.47185 * 150.02124 * 1 2 3 26 26 H 1.08001 * 120.33257 * 0.02562 * 3 2 1 27 27 H 1.08998 * 109.47461 * 300.00619 * 11 10 8 28 28 H 1.09010 * 109.46796 * 60.00409 * 11 10 8 29 29 H 1.08998 * 109.47242 * 300.00569 * 12 11 10 30 30 H 1.08996 * 109.46952 * 60.00478 * 12 11 10 31 31 H 1.08992 * 109.47275 * 299.99826 * 13 12 11 32 32 H 1.09004 * 109.46935 * 60.00637 * 13 12 11 33 33 H 0.96994 * 120.00186 * 180.02562 * 17 16 14 34 34 H 1.08008 * 120.45957 * 359.97438 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2153 1.1909 0.0000 4 6 3.6024 1.1570 0.0005 5 17 4.4955 2.6457 -0.0001 6 7 4.2500 0.0113 0.0060 7 6 3.6082 -1.1511 0.0009 8 6 4.3791 -2.4152 0.0018 9 8 3.7974 -3.4811 0.0022 10 8 5.7255 -2.3828 -0.0034 11 6 6.4157 -3.6603 -0.0082 12 6 7.9271 -3.4234 -0.0131 13 6 8.6543 -4.7696 -0.0189 14 6 10.1431 -4.5362 -0.0231 15 1 10.5318 -3.5286 -0.0214 16 6 11.0091 -5.6092 -0.0291 17 7 10.5358 -6.8362 -0.0307 18 14 12.8546 -5.3200 -0.0336 19 1 13.2387 -4.5556 1.1803 20 1 13.5603 -6.6265 -0.0393 21 1 13.2317 -4.5478 -1.2447 22 6 2.2156 -1.1913 0.0005 23 1 -0.3634 0.0003 1.0277 24 1 -0.3634 0.8898 -0.5141 25 1 -0.3633 -0.8901 -0.5135 26 1 1.6930 2.1362 0.0004 27 1 6.1397 -4.2257 0.8818 28 1 6.1328 -4.2226 -0.8982 29 1 8.2034 -2.8577 -0.9030 30 1 8.2097 -2.8613 0.8769 31 1 8.3781 -5.3355 0.8707 32 1 8.3717 -5.3313 -0.9093 33 1 11.1449 -7.5910 -0.0346 34 1 1.6954 -2.1379 0.0014 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000909690509.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:02:03 Heat of formation + Delta-G solvation = -74.946962 kcal Electronic energy + Delta-G solvation = -18575.923817 eV Core-core repulsion = 15306.330977 eV Total energy + Delta-G solvation = -3269.592840 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -41.11812 -39.75985 -37.04613 -36.51505 -34.67052 -33.93353 -31.90346 -31.51159 -28.48541 -27.31036 -25.32402 -23.32375 -22.98430 -20.94435 -20.29447 -18.14203 -17.45880 -16.64668 -16.47056 -16.44828 -16.05315 -15.54564 -15.11170 -14.45140 -14.02027 -13.63867 -13.55958 -13.31471 -13.11688 -12.39214 -12.25118 -12.14419 -11.88332 -11.88128 -11.63499 -10.94916 -10.93395 -10.61179 -10.59106 -10.39125 -10.13942 -10.08960 -9.69923 -9.49856 -9.48471 -9.15152 -8.35908 -6.01039 -4.03808 0.03528 0.55743 1.37760 2.19338 2.57292 3.28231 3.35024 3.38822 3.41934 3.80287 4.22219 4.29452 4.38208 4.46900 4.55348 4.86385 5.01546 5.05100 5.18751 5.34900 5.41051 5.57883 5.58214 5.62619 5.86234 6.02156 6.39537 6.57759 6.78804 7.01144 7.08576 7.62746 7.73996 7.78922 7.97476 8.38855 9.02230 9.60289 11.10453 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.024946 B = 0.002949 C = 0.002645 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1122.164808 B = 9491.150088 C =10582.245515 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.037 4.037 3 C -0.132 4.132 4 C 0.176 3.824 5 Cl -0.020 7.020 6 N -0.430 5.430 7 C 0.124 3.876 8 C 0.518 3.482 9 O -0.497 6.497 10 O -0.329 6.329 11 C 0.065 3.935 12 C -0.109 4.109 13 C 0.025 3.975 14 C -0.521 4.521 15 H 0.057 0.943 16 C 0.057 3.943 17 N -0.896 5.896 18 Si 0.895 3.105 19 H -0.276 1.276 20 H -0.287 1.287 21 H -0.276 1.276 22 C -0.108 4.108 23 H 0.084 0.916 24 H 0.078 0.922 25 H 0.080 0.920 26 H 0.153 0.847 27 H 0.069 0.931 28 H 0.069 0.931 29 H 0.061 0.939 30 H 0.061 0.939 31 H 0.019 0.981 32 H 0.020 0.980 33 H 0.262 0.738 34 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.569 17.476 0.090 28.545 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.045 4.045 3 C -0.153 4.153 4 C 0.009 3.991 5 Cl 0.009 6.991 6 N -0.144 5.144 7 C -0.013 4.013 8 C 0.360 3.640 9 O -0.385 6.385 10 O -0.244 6.244 11 C -0.007 4.007 12 C -0.146 4.146 13 C -0.012 4.012 14 C -0.560 4.560 15 H 0.076 0.924 16 C -0.144 4.144 17 N -0.535 5.535 18 Si 0.723 3.277 19 H -0.202 1.202 20 H -0.213 1.213 21 H -0.202 1.202 22 C -0.129 4.129 23 H 0.103 0.897 24 H 0.097 0.903 25 H 0.099 0.901 26 H 0.171 0.829 27 H 0.088 0.912 28 H 0.088 0.912 29 H 0.080 0.920 30 H 0.080 0.920 31 H 0.038 0.962 32 H 0.038 0.962 33 H 0.071 0.929 34 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -21.629 17.024 0.095 27.526 hybrid contribution 0.378 0.084 0.003 0.387 sum -21.251 17.108 0.098 27.282 Atomic orbital electron populations 1.20871 0.88481 1.04202 1.03695 1.20314 0.97636 0.91494 0.95027 1.22025 0.92452 1.00193 1.00584 1.21660 0.88949 0.88765 0.99774 1.98433 1.76674 1.27617 1.96380 1.67005 1.40947 0.96886 1.09590 1.20084 0.90441 0.89676 1.01104 1.20571 0.82521 0.87381 0.73529 1.90858 1.71454 1.30524 1.45665 1.86688 1.17884 1.37975 1.81846 1.23645 0.93815 0.80948 1.02326 1.21771 0.88440 1.02194 1.02236 1.19049 0.94637 0.89868 0.97666 1.21148 0.91034 0.92784 1.50995 0.92433 1.25026 0.99081 0.95137 0.95202 1.69953 1.34997 0.97941 1.50573 0.86603 0.85099 0.77295 0.78699 1.20168 1.21277 1.20164 1.22130 0.93017 1.00382 0.97322 0.89709 0.90304 0.90142 0.82935 0.91223 0.91218 0.91989 0.91986 0.96218 0.96213 0.92854 0.82298 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.43 10.06 36.01 0.36 -0.06 16 2 C -0.04 -0.27 5.91 -104.36 -0.62 -0.88 16 3 C -0.13 -1.00 9.59 -39.27 -0.38 -1.38 16 4 C 0.18 1.93 7.27 -17.46 -0.13 1.80 16 5 Cl -0.02 -0.20 29.11 -51.86 -1.51 -1.71 16 6 N -0.43 -6.05 10.10 -6.94 -0.07 -6.12 16 7 C 0.12 1.67 6.75 -83.03 -0.56 1.11 16 8 C 0.52 8.51 7.95 34.76 0.28 8.78 16 9 O -0.50 -8.70 16.11 -19.21 -0.31 -9.01 16 10 O -0.33 -6.04 10.04 -40.44 -0.41 -6.45 16 11 C 0.07 1.25 5.47 37.15 0.20 1.45 16 12 C -0.11 -2.34 5.53 -26.73 -0.15 -2.49 16 13 C 0.02 0.65 4.97 -27.88 -0.14 0.51 16 14 C -0.52 -14.94 9.11 -34.44 -0.31 -15.26 16 15 H 0.06 1.60 7.74 -52.48 -0.41 1.19 16 16 C 0.06 1.65 5.46 -17.82 -0.10 1.55 16 17 N -0.90 -27.11 13.29 55.43 0.74 -26.38 16 18 Si 0.90 21.88 29.54 -169.99 -5.02 16.86 16 19 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 20 H -0.29 -6.92 7.11 56.52 0.40 -6.52 16 21 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 22 C -0.11 -1.07 9.34 -39.04 -0.36 -1.43 16 23 H 0.08 0.24 8.14 -51.93 -0.42 -0.18 16 24 H 0.08 0.18 8.10 -51.93 -0.42 -0.24 16 25 H 0.08 0.25 8.10 -51.93 -0.42 -0.17 16 26 H 0.15 0.68 8.06 -52.49 -0.42 0.26 16 27 H 0.07 1.30 8.14 -51.93 -0.42 0.88 16 28 H 0.07 1.30 8.14 -51.92 -0.42 0.88 16 29 H 0.06 1.32 8.14 -51.93 -0.42 0.90 16 30 H 0.06 1.32 8.14 -51.93 -0.42 0.90 16 31 H 0.02 0.53 8.14 -51.93 -0.42 0.11 16 32 H 0.02 0.53 8.14 -51.93 -0.42 0.11 16 33 H 0.26 7.48 8.31 -40.82 -0.34 7.14 16 34 H 0.16 1.36 7.64 -52.48 -0.40 0.96 16 LS Contribution 321.84 15.07 4.85 4.85 Total: -1.00 -32.67 321.84 -7.80 -40.46 By element: Atomic # 1 Polarization: -2.06 SS G_CDS: -4.17 Total: -6.22 kcal Atomic # 6 Polarization: -4.39 SS G_CDS: -1.90 Total: -6.30 kcal Atomic # 7 Polarization: -33.16 SS G_CDS: 0.67 Total: -32.49 kcal Atomic # 8 Polarization: -14.74 SS G_CDS: -0.72 Total: -15.45 kcal Atomic # 14 Polarization: 21.88 SS G_CDS: -5.02 Total: 16.86 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -1.51 Total: -1.71 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -32.67 -7.80 -40.46 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000909690509.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.484 kcal (2) G-P(sol) polarization free energy of solvation -32.667 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.152 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.795 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.463 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.947 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds