Wall clock time and date at job start Tue Mar 31 2020 05:40:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43198 * 179.97438 * 2 1 4 4 C 1.39833 * 120.23912 * 256.09486 * 3 2 1 5 5 F 1.35102 * 120.05325 * 0.02562 * 4 3 2 6 6 C 1.38231 * 119.89754 * 180.25877 * 4 3 2 7 7 C 1.38437 * 120.39567 * 359.76498 * 6 4 3 8 8 C 1.38058 * 120.49333 * 0.02844 * 7 6 4 9 9 C 1.39209 * 120.08864 * 359.94844 * 8 7 6 10 10 C 1.48089 * 120.20027 * 180.02562 * 9 8 7 11 11 C 1.39554 * 120.06093 * 130.22579 * 10 9 8 12 12 C 1.37788 * 119.93339 * 180.30230 * 11 10 9 13 13 C 1.39037 * 120.06125 * 359.45297 * 12 11 10 14 14 O 1.35668 * 119.93487 * 180.27983 * 13 12 11 15 15 C 1.34814 * 117.00251 * 354.44741 * 14 13 12 16 16 H 1.08000 * 119.99647 * 5.05994 * 15 14 13 17 17 C 1.38662 * 120.00119 * 185.05728 * 15 14 13 18 18 N 1.31548 * 119.99880 * 0.02562 * 17 15 14 19 19 Si 1.86800 * 119.99946 * 179.97438 * 17 15 14 20 20 H 1.48498 * 109.46815 * 89.99954 * 19 17 15 21 21 H 1.48493 * 109.47410 * 210.00184 * 19 17 15 22 22 H 1.48499 * 109.47286 * 330.00580 * 19 17 15 23 23 C 1.39032 * 120.12553 * 0.29568 * 13 12 11 24 24 C 1.37787 * 120.06477 * 359.97438 * 23 13 12 25 25 H 1.07998 * 119.79666 * 179.74874 * 6 4 3 26 26 H 1.08001 * 119.75394 * 179.97438 * 7 6 4 27 27 H 1.08007 * 119.95431 * 179.97438 * 8 7 6 28 28 H 1.07999 * 120.03021 * 0.05070 * 11 10 9 29 29 H 1.08000 * 119.96246 * 179.73380 * 12 11 10 30 30 H 0.97003 * 119.99617 * 179.97438 * 18 17 15 31 31 H 1.07995 * 119.96968 * 179.97438 * 23 13 12 32 32 H 1.07997 * 120.03443 * 179.97438 * 24 23 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5679 0.0006 0.0000 4 6 3.2720 0.2913 1.1727 5 9 2.6024 0.5725 2.3118 6 6 4.6543 0.2952 1.1634 7 6 5.3477 0.0080 0.0001 8 6 4.6691 -0.2853 -1.1658 9 6 3.2771 -0.2954 -1.1794 10 6 2.5466 -0.6103 -2.4285 11 6 1.5276 -1.5638 -2.4209 12 6 0.8538 -1.8593 -3.5860 13 6 1.1806 -1.2003 -4.7658 14 8 0.5117 -1.4891 -5.9102 15 6 -0.3760 -2.5026 -5.8612 16 1 -0.5880 -2.9897 -4.9209 17 6 -1.0168 -2.9195 -7.0180 18 7 -0.7582 -2.3264 -8.1634 19 14 -2.2462 -4.3242 -6.9502 20 1 -3.6039 -3.7816 -6.6903 21 1 -2.2424 -5.0484 -8.2465 22 1 -1.8698 -5.2593 -5.8597 23 6 2.1918 -0.2461 -4.7751 24 6 2.8727 0.0494 -3.6142 25 1 5.1964 0.5238 2.0690 26 1 6.4277 0.0144 0.0045 27 1 5.2188 -0.5076 -2.0685 28 1 1.2701 -2.0725 -1.5037 29 1 0.0680 -2.6002 -3.5816 30 1 -1.2063 -2.6183 -8.9727 31 1 2.4439 0.2639 -5.6930 32 1 3.6584 0.7903 -3.6221 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001243591283.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:40:37 Heat of formation + Delta-G solvation = 6.422234 kcal Electronic energy + Delta-G solvation = -20111.902258 eV Core-core repulsion = 16724.810396 eV Total energy + Delta-G solvation = -3387.091863 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 283.075 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -49.16305 -39.81757 -38.75792 -36.52566 -36.25395 -32.65138 -31.89294 -31.07262 -30.32348 -28.11302 -25.57293 -24.16487 -23.05025 -21.92944 -20.84726 -19.04611 -18.17927 -17.56282 -16.88991 -16.62207 -15.91199 -15.24103 -14.98842 -14.72608 -14.50919 -13.91049 -13.76556 -13.64567 -13.55729 -13.22395 -12.95741 -12.79557 -12.59945 -12.20904 -11.95814 -11.89973 -11.75984 -11.42569 -11.01551 -10.88656 -10.77828 -10.52891 -9.54788 -9.22327 -8.99496 -8.82836 -8.38817 -7.28768 -6.60787 -4.17553 0.50759 0.87909 2.07883 2.12044 2.79531 2.91233 3.06348 3.07106 3.11990 3.69500 3.79720 3.85696 3.95501 4.38219 4.51980 4.77875 4.95777 4.98432 5.03004 5.09986 5.40415 5.52184 5.58463 5.72629 5.81859 5.99616 6.03323 6.12016 6.28555 6.48205 6.54775 6.71726 6.89555 7.03867 7.16506 7.26883 7.60045 7.60707 7.84141 8.84285 9.50337 10.56054 Molecular weight = 283.07amu Principal moments of inertia in cm(-1) A = 0.028817 B = 0.003788 C = 0.003498 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 971.416295 B = 7389.585778 C = 8002.630833 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C 0.255 3.745 3 C -0.070 4.070 4 C 0.146 3.854 5 F -0.132 7.132 6 C -0.173 4.173 7 C -0.059 4.059 8 C -0.132 4.132 9 C 0.077 3.923 10 C -0.189 4.189 11 C -0.041 4.041 12 C -0.233 4.233 13 C 0.165 3.835 14 O -0.165 6.165 15 C -0.393 4.393 16 H 0.095 0.905 17 C 0.042 3.958 18 N -0.855 5.855 19 Si 0.943 3.057 20 H -0.271 1.271 21 H -0.275 1.275 22 H -0.266 1.266 23 C -0.194 4.194 24 C -0.043 4.043 25 H 0.141 0.859 26 H 0.139 0.861 27 H 0.141 0.859 28 H 0.105 0.895 29 H 0.130 0.870 30 H 0.273 0.727 31 H 0.123 0.877 32 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.608 3.188 13.881 19.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.078 5.078 2 C -0.060 4.060 3 C -0.074 4.074 4 C 0.125 3.875 5 F -0.110 7.110 6 C -0.192 4.192 7 C -0.078 4.078 8 C -0.150 4.150 9 C 0.074 3.926 10 C -0.190 4.190 11 C -0.060 4.060 12 C -0.252 4.252 13 C 0.109 3.891 14 O -0.067 6.067 15 C -0.469 4.469 16 H 0.113 0.887 17 C -0.164 4.164 18 N -0.488 5.488 19 Si 0.767 3.233 20 H -0.197 1.197 21 H -0.200 1.200 22 H -0.190 1.190 23 C -0.213 4.213 24 C -0.062 4.062 25 H 0.159 0.841 26 H 0.156 0.844 27 H 0.159 0.841 28 H 0.123 0.877 29 H 0.148 0.852 30 H 0.083 0.917 31 H 0.141 0.859 32 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 10.714 3.268 13.414 17.476 hybrid contribution -0.386 -0.680 0.303 0.838 sum 10.328 2.588 13.717 17.364 Atomic orbital electron populations 1.81217 1.11733 1.08100 1.06783 1.25161 0.92297 0.94387 0.94163 1.16153 0.85260 1.11689 0.94321 1.17559 0.90114 0.99092 0.80771 1.91530 1.80795 1.90689 1.48031 1.20994 0.91220 1.06310 1.00684 1.21137 1.00501 0.94743 0.91398 1.21344 0.92610 1.01832 0.99181 1.18731 0.92560 0.90716 0.90610 1.18061 1.03317 1.05779 0.91830 1.20746 0.93021 0.95215 0.96980 1.21068 1.05275 1.06348 0.92553 1.19522 0.90190 0.92565 0.86846 1.83941 1.47082 1.47118 1.28529 1.21429 1.18539 1.10492 0.96439 0.88724 1.25351 0.98232 0.98728 0.94050 1.70032 1.40238 1.39555 0.98951 0.85673 0.79670 0.79531 0.78419 1.19671 1.20032 1.18997 1.20142 0.99456 1.02981 0.98744 1.20619 0.97684 0.97236 0.90643 0.84107 0.84361 0.84092 0.87654 0.85189 0.91692 0.85933 0.86317 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -7.49 18.54 41.84 0.78 -6.71 16 2 C 0.26 4.19 12.30 -22.48 -0.28 3.92 16 3 C -0.07 -0.95 5.75 -106.42 -0.61 -1.56 16 4 C 0.15 1.66 7.27 -38.99 -0.28 1.38 16 5 F -0.13 -1.62 16.81 2.25 0.04 -1.59 16 6 C -0.17 -1.43 10.00 -39.51 -0.40 -1.83 16 7 C -0.06 -0.44 10.02 -39.57 -0.40 -0.83 16 8 C -0.13 -1.28 9.49 -39.29 -0.37 -1.65 16 9 C 0.08 1.00 5.50 -104.54 -0.57 0.43 16 10 C -0.19 -3.09 5.11 -104.87 -0.54 -3.62 16 11 C -0.04 -0.76 8.43 -39.26 -0.33 -1.09 16 12 C -0.23 -5.02 9.15 -39.45 -0.36 -5.38 16 13 C 0.16 3.83 6.65 -38.99 -0.26 3.57 16 14 O -0.17 -4.56 9.75 0.35 0.00 -4.56 16 15 C -0.39 -10.72 9.48 30.89 0.29 -10.43 16 16 H 0.10 2.40 5.19 -52.49 -0.27 2.13 16 17 C 0.04 1.13 5.49 -17.52 -0.10 1.03 16 18 N -0.85 -24.32 13.67 55.48 0.76 -23.56 16 19 Si 0.94 20.09 29.55 -169.99 -5.02 15.07 16 20 H -0.27 -5.68 7.11 56.52 0.40 -5.28 16 21 H -0.28 -5.71 7.11 56.52 0.40 -5.31 16 22 H -0.27 -5.46 7.11 56.52 0.40 -5.06 16 23 C -0.19 -3.83 9.98 -39.45 -0.39 -4.22 16 24 C -0.04 -0.71 9.50 -39.25 -0.37 -1.08 16 25 H 0.14 0.81 8.06 -52.49 -0.42 0.39 16 26 H 0.14 0.58 8.06 -52.49 -0.42 0.16 16 27 H 0.14 1.17 8.04 -52.48 -0.42 0.75 16 28 H 0.11 1.82 7.28 -52.49 -0.38 1.44 16 29 H 0.13 2.84 5.62 -52.49 -0.30 2.55 16 30 H 0.27 7.11 8.31 -40.82 -0.34 6.77 16 31 H 0.12 2.30 8.06 -52.49 -0.42 1.87 16 32 H 0.12 1.52 8.04 -52.49 -0.42 1.10 16 LS Contribution 300.42 15.07 4.53 4.53 Total: -1.00 -30.59 300.42 -6.08 -36.68 By element: Atomic # 1 Polarization: 3.70 SS G_CDS: -2.20 Total: 1.50 kcal Atomic # 6 Polarization: -16.40 SS G_CDS: -4.97 Total: -21.36 kcal Atomic # 7 Polarization: -31.81 SS G_CDS: 1.53 Total: -30.27 kcal Atomic # 8 Polarization: -4.56 SS G_CDS: 0.00 Total: -4.56 kcal Atomic # 9 Polarization: -1.62 SS G_CDS: 0.04 Total: -1.59 kcal Atomic # 14 Polarization: 20.09 SS G_CDS: -5.02 Total: 15.07 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -30.59 -6.08 -36.68 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001243591283.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.099 kcal (2) G-P(sol) polarization free energy of solvation -30.592 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.507 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.085 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.677 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.422 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds