Wall clock time and date at job start Tue Mar 31 2020 05:27:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09007 * 109.46498 * 2 1 4 4 O 1.42893 * 109.47582 * 120.00076 * 2 1 3 5 5 C 1.35901 * 117.00228 * 276.08530 * 4 2 1 6 6 C 1.38763 * 120.05358 * 177.89361 * 5 4 2 7 7 C 1.38128 * 119.97050 * 179.97438 * 6 5 4 8 8 C 1.38264 * 120.07096 * 359.97438 * 7 6 5 9 9 C 1.38362 * 120.09870 * 0.02562 * 8 7 6 10 10 Cl 1.73598 * 119.98871 * 179.97438 * 9 8 7 11 11 C 1.38286 * 120.03009 * 359.71940 * 9 8 7 12 12 C 1.50705 * 109.47252 * 240.00400 * 2 1 3 13 13 O 1.21288 * 119.99675 * 253.18008 * 12 2 1 14 14 N 1.34781 * 119.99952 * 73.18330 * 12 2 1 15 15 C 1.46497 * 120.00051 * 5.30613 * 14 12 2 16 16 C 1.37097 * 119.99641 * 185.30707 * 14 12 2 17 17 H 1.07999 * 120.00071 * 28.67039 * 16 14 12 18 18 C 1.38946 * 119.99697 * 208.66743 * 16 14 12 19 19 N 1.31415 * 119.99944 * 7.68563 * 18 16 14 20 20 Si 1.86799 * 120.00188 * 187.68715 * 18 16 14 21 21 H 1.48502 * 109.46820 * 359.97438 * 20 18 16 22 22 H 1.48498 * 109.47505 * 119.99569 * 20 18 16 23 23 H 1.48503 * 109.47411 * 240.00043 * 20 18 16 24 24 H 1.08997 * 109.47245 * 65.30221 * 1 2 3 25 25 H 1.09004 * 109.47191 * 185.29928 * 1 2 3 26 26 H 1.08994 * 109.47325 * 305.29874 * 1 2 3 27 27 H 1.08007 * 120.00978 * 0.02562 * 6 5 4 28 28 H 1.08005 * 119.95818 * 180.02562 * 7 6 5 29 29 H 1.07998 * 119.94781 * 180.02562 * 8 7 6 30 30 H 1.07997 * 120.04113 * 180.30504 * 11 9 8 31 31 H 1.09004 * 109.47057 * 92.99053 * 15 14 12 32 32 H 1.08993 * 109.47164 * 212.99371 * 15 14 12 33 33 H 1.09007 * 109.47257 * 332.99414 * 15 14 12 34 34 H 0.97005 * 119.99424 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8932 1.0278 0.0000 4 8 2.0064 -0.6736 1.1667 5 6 2.0911 0.0569 2.3096 6 6 2.5040 -0.5448 3.4898 7 6 2.5900 0.1994 4.6503 8 6 2.2656 1.5434 4.6371 9 6 1.8535 2.1462 3.4619 10 17 1.4462 3.8337 3.4488 11 6 1.7710 1.4063 2.2965 12 6 2.0323 -0.7103 -1.2305 13 8 2.5211 -1.8163 -1.1352 14 7 1.9386 -0.1166 -2.4369 15 6 1.4566 1.2631 -2.5388 16 6 2.2944 -0.8038 -3.5686 17 1 2.2025 -1.8795 -3.5984 18 6 2.7731 -0.1164 -4.6771 19 7 3.0280 1.1701 -4.5928 20 14 3.0545 -1.0207 -6.2872 21 1 2.6943 -2.4517 -6.1206 22 1 2.2088 -0.4173 -7.3483 23 1 4.4845 -0.9123 -6.6725 24 1 -0.3633 0.4294 -0.9336 25 1 -0.3634 -1.0233 0.0949 26 1 -0.3633 0.5938 0.8387 27 1 2.7589 -1.5943 3.5008 28 1 2.9119 -0.2690 5.5688 29 1 2.3339 2.1234 5.5456 30 1 1.4541 1.8778 1.3781 31 1 2.3055 1.9466 -2.5231 32 1 0.9067 1.3878 -3.4715 33 1 0.7989 1.4813 -1.6973 34 1 3.3619 1.6500 -5.3668 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000051018348.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:27:28 Heat of formation + Delta-G solvation = -40.300584 kcal Electronic energy + Delta-G solvation = -19890.645640 eV Core-core repulsion = 16622.555179 eV Total energy + Delta-G solvation = -3268.090461 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.36377 -38.66564 -37.30078 -36.31644 -34.68711 -32.35746 -31.16866 -30.67684 -29.58569 -26.34942 -25.18860 -23.84477 -22.72482 -21.98205 -19.25765 -18.34877 -16.97493 -16.22627 -16.09873 -15.73254 -15.37421 -14.89503 -14.67192 -14.10399 -13.91777 -13.80801 -13.36415 -13.14424 -12.74361 -12.29730 -12.01353 -11.86050 -11.73842 -11.43733 -11.36519 -11.21085 -11.04193 -11.00123 -10.86353 -10.54401 -10.36925 -10.34671 -9.09228 -8.96369 -8.48196 -8.15701 -7.71528 -6.36622 -4.00149 1.07471 1.29440 2.01302 3.11600 3.13731 3.24136 3.32068 3.58077 3.74362 4.11607 4.67870 4.77926 4.86088 5.01924 5.03872 5.15025 5.27926 5.35712 5.40905 5.57260 5.59989 5.80263 5.91492 6.07574 6.10054 6.23686 6.26628 6.37566 6.57307 6.73543 7.12835 7.47516 7.50287 8.07522 8.40895 9.10268 9.29595 9.85407 10.67043 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.026707 B = 0.004173 C = 0.003812 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1048.146659 B = 6708.381809 C = 7344.325715 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.070 3.930 3 H 0.087 0.913 4 O -0.276 6.276 5 C 0.156 3.844 6 C -0.152 4.152 7 C -0.068 4.068 8 C -0.160 4.160 9 C 0.008 3.992 10 Cl -0.073 7.073 11 C -0.210 4.210 12 C 0.454 3.546 13 O -0.565 6.565 14 N -0.439 5.439 15 C 0.100 3.900 16 C -0.305 4.305 17 H 0.097 0.903 18 C 0.034 3.966 19 N -0.882 5.882 20 Si 0.929 3.071 21 H -0.267 1.267 22 H -0.280 1.280 23 H -0.280 1.280 24 H 0.084 0.916 25 H 0.072 0.928 26 H 0.063 0.937 27 H 0.138 0.862 28 H 0.137 0.863 29 H 0.131 0.869 30 H 0.142 0.858 31 H 0.064 0.936 32 H 0.068 0.932 33 H 0.031 0.969 34 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.572 4.888 14.522 15.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.010 3.990 3 H 0.104 0.896 4 O -0.187 6.187 5 C 0.109 3.891 6 C -0.170 4.170 7 C -0.087 4.087 8 C -0.179 4.179 9 C -0.019 4.019 10 Cl -0.044 7.044 11 C -0.229 4.229 12 C 0.240 3.760 13 O -0.447 6.447 14 N -0.160 5.160 15 C -0.043 4.043 16 C -0.433 4.433 17 H 0.115 0.885 18 C -0.170 4.170 19 N -0.521 5.521 20 Si 0.755 3.245 21 H -0.191 1.191 22 H -0.206 1.206 23 H -0.206 1.206 24 H 0.103 0.897 25 H 0.091 0.909 26 H 0.082 0.918 27 H 0.156 0.844 28 H 0.155 0.845 29 H 0.149 0.851 30 H 0.160 0.840 31 H 0.082 0.918 32 H 0.086 0.914 33 H 0.049 0.951 34 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -4.256 4.436 14.357 15.618 hybrid contribution 0.078 0.324 -0.962 1.018 sum -4.178 4.760 13.394 14.816 Atomic orbital electron populations 1.22358 0.93638 1.03857 1.03338 1.22388 0.95101 0.96931 0.84539 0.89583 1.86289 1.79727 1.37340 1.15356 1.19059 0.93287 0.89319 0.87464 1.20592 1.04712 1.01521 0.90207 1.20876 0.97245 0.92894 0.97640 1.20884 1.04487 0.95523 0.97012 1.20624 1.01184 0.85156 0.94911 1.98368 1.92156 1.14983 1.98864 1.21220 1.09015 0.93763 0.98887 1.19508 0.84894 0.88365 0.83240 1.90558 1.48003 1.21073 1.85084 1.43406 1.55884 1.12505 1.04198 1.21725 0.98677 0.84270 0.99647 1.19651 1.41508 0.93187 0.88970 0.88486 1.25425 0.95389 0.95908 1.00262 1.69953 1.43286 1.07931 1.30917 0.85822 0.78091 0.79727 0.80848 1.19137 1.20615 1.20604 0.89693 0.90900 0.91845 0.84436 0.84539 0.85085 0.84047 0.91772 0.91364 0.95096 0.92171 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.72 8.87 37.16 0.33 -2.39 16 2 C 0.07 1.33 1.80 -27.88 -0.05 1.28 16 3 H 0.09 1.51 5.17 -51.93 -0.27 1.24 16 4 O -0.28 -5.31 9.37 -38.99 -0.37 -5.68 16 5 C 0.16 2.45 6.58 -39.22 -0.26 2.20 16 6 C -0.15 -2.00 9.99 -39.43 -0.39 -2.40 16 7 C -0.07 -0.72 10.04 -39.61 -0.40 -1.12 16 8 C -0.16 -1.75 9.83 -39.53 -0.39 -2.14 16 9 C 0.01 0.10 6.32 -39.52 -0.25 -0.15 16 10 Cl -0.07 -0.84 28.95 -51.86 -1.50 -2.34 16 11 C -0.21 -2.98 8.17 -39.39 -0.32 -3.31 16 12 C 0.45 11.22 6.93 -10.98 -0.08 11.14 16 13 O -0.56 -16.25 16.35 -14.01 -0.23 -16.48 16 14 N -0.44 -11.09 3.00 -122.19 -0.37 -11.46 16 15 C 0.10 2.15 8.11 59.85 0.49 2.63 16 16 C -0.31 -8.42 9.13 -14.93 -0.14 -8.56 16 17 H 0.10 2.79 7.57 -52.49 -0.40 2.39 16 18 C 0.03 0.88 5.19 -17.47 -0.09 0.79 16 19 N -0.88 -23.22 10.80 55.50 0.60 -22.62 16 20 Si 0.93 20.54 29.56 -169.99 -5.02 15.52 16 21 H -0.27 -5.91 7.11 56.52 0.40 -5.51 16 22 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 23 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 24 H 0.08 1.28 6.16 -51.93 -0.32 0.96 16 25 H 0.07 1.18 8.14 -51.93 -0.42 0.75 16 26 H 0.06 0.83 7.33 -51.93 -0.38 0.45 16 27 H 0.14 1.69 8.06 -52.48 -0.42 1.26 16 28 H 0.14 1.00 8.06 -52.48 -0.42 0.58 16 29 H 0.13 1.14 8.06 -52.49 -0.42 0.71 16 30 H 0.14 1.96 5.62 -52.49 -0.29 1.67 16 31 H 0.06 1.45 7.37 -51.93 -0.38 1.07 16 32 H 0.07 1.51 7.44 -51.93 -0.39 1.13 16 33 H 0.03 0.53 4.54 -51.93 -0.24 0.29 16 34 H 0.27 6.67 8.31 -40.82 -0.34 6.33 16 LS Contribution 302.14 15.07 4.55 4.55 Total: -1.00 -31.24 302.14 -7.38 -38.62 By element: Atomic # 1 Polarization: 5.40 SS G_CDS: -3.49 Total: 1.91 kcal Atomic # 6 Polarization: -0.47 SS G_CDS: -1.55 Total: -2.01 kcal Atomic # 7 Polarization: -34.31 SS G_CDS: 0.23 Total: -34.08 kcal Atomic # 8 Polarization: -21.56 SS G_CDS: -0.59 Total: -22.16 kcal Atomic # 14 Polarization: 20.54 SS G_CDS: -5.02 Total: 15.52 kcal Atomic # 17 Polarization: -0.84 SS G_CDS: -1.50 Total: -2.34 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -31.24 -7.38 -38.62 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000051018348.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.681 kcal (2) G-P(sol) polarization free energy of solvation -31.243 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.925 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.619 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.301 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds