Wall clock time and date at job start Tue Mar 31 2020 05:30:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.42902 * 109.46840 * 2 1 4 4 C 1.35899 * 117.00103 * 180.02562 * 3 2 1 5 5 C 1.38735 * 120.05053 * 0.02562 * 4 3 2 6 6 C 1.38228 * 119.93583 * 179.97438 * 5 4 3 7 7 Cl 1.73599 * 119.98949 * 179.97438 * 6 5 4 8 8 C 1.38415 * 120.02804 * 0.02562 * 6 5 4 9 9 C 1.38224 * 120.09780 * 359.74632 * 8 6 5 10 10 C 1.38177 * 120.06767 * 0.50752 * 9 8 6 11 11 C 1.50693 * 120.01399 * 179.76653 * 10 9 8 12 12 N 1.46498 * 109.47257 * 259.72242 * 11 10 9 13 13 C 1.34783 * 119.99949 * 179.97438 * 12 11 10 14 14 O 1.21689 * 119.99668 * 0.02562 * 13 12 11 15 15 C 1.46378 * 119.99766 * 180.02562 * 13 12 11 16 16 H 1.07996 * 120.00107 * 353.94296 * 15 13 12 17 17 C 1.40045 * 119.99804 * 173.94284 * 15 13 12 18 18 N 1.30672 * 120.00076 * 6.14730 * 17 15 13 19 19 Si 1.86801 * 120.00133 * 186.15220 * 17 15 13 20 20 H 1.48493 * 109.47433 * 94.98088 * 19 17 15 21 21 H 1.48500 * 109.47192 * 214.98404 * 19 17 15 22 22 H 1.48508 * 109.46705 * 334.97952 * 19 17 15 23 23 H 1.09007 * 109.46638 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.47101 * 299.99918 * 1 2 3 25 25 H 1.08990 * 109.47098 * 60.00521 * 1 2 3 26 26 H 1.08994 * 109.47597 * 240.00004 * 2 1 3 27 27 H 1.09005 * 109.47133 * 119.99441 * 2 1 3 28 28 H 1.08006 * 120.02892 * 359.96190 * 5 4 3 29 29 H 1.08003 * 119.95187 * 180.02562 * 8 6 5 30 30 H 1.07995 * 119.96638 * 180.25915 * 9 8 6 31 31 H 1.09002 * 109.46672 * 139.72713 * 11 10 9 32 32 H 1.09000 * 109.47489 * 19.72787 * 11 10 9 33 33 H 0.96999 * 120.00293 * 0.02562 * 12 11 10 34 34 H 0.97001 * 120.00206 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.3535 1.5255 -0.0005 5 6 4.1997 0.4260 -0.0016 6 6 5.5697 0.6100 -0.0027 7 17 6.6298 -0.7647 -0.0033 8 6 6.0967 1.8899 -0.0022 9 6 5.2548 2.9862 -0.0059 10 6 3.8848 2.8069 0.0005 11 6 2.9681 4.0030 0.0018 12 7 2.4814 4.2438 1.3624 13 6 1.6419 5.2697 1.6061 14 8 1.2879 5.9956 0.6958 15 6 1.1560 5.5107 2.9657 16 1 1.3902 4.8114 3.7547 17 6 0.3874 6.6479 3.2433 18 7 0.0026 7.4301 2.2698 19 14 -0.0876 7.0470 5.0053 20 1 0.8927 8.0042 5.5777 21 1 -1.4428 7.6538 5.0274 22 1 -0.0905 5.7998 5.8117 23 1 -0.3633 -1.0278 0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5137 -0.8900 26 1 1.8934 -0.5138 -0.8899 27 1 1.8933 -0.5138 0.8901 28 1 3.7883 -0.5726 -0.0014 29 1 7.1673 2.0322 -0.0034 30 1 5.6683 3.9838 -0.0097 31 1 2.1219 3.8128 -0.6585 32 1 3.5133 4.8791 -0.3495 33 1 2.7638 3.6654 2.0880 34 1 -0.5301 8.2176 2.4621 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000185509367.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:30:35 Heat of formation + Delta-G solvation = -67.657974 kcal Electronic energy + Delta-G solvation = -19488.353783 eV Core-core repulsion = 16219.077017 eV Total energy + Delta-G solvation = -3269.276766 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.35381 -37.83071 -37.17936 -36.41155 -33.63911 -32.35006 -31.82738 -30.69268 -29.60682 -26.72979 -24.78147 -24.11307 -21.89806 -21.26306 -19.60981 -18.32517 -17.26097 -16.33126 -16.14226 -15.76809 -15.27337 -14.88044 -14.27372 -14.00936 -13.81932 -13.53089 -13.17891 -13.08441 -12.71277 -12.65642 -12.23130 -11.97054 -11.65462 -11.45946 -11.24222 -11.09992 -11.08385 -10.83417 -10.81606 -10.65944 -10.39339 -10.18390 -8.92582 -8.80876 -8.24934 -7.52080 -7.42140 -6.14944 -4.58621 1.04720 1.29856 1.96768 3.16322 3.17222 3.23400 3.26986 3.53927 4.15450 4.62728 4.67904 4.79381 4.85730 4.92595 4.99921 5.12177 5.16022 5.27682 5.41911 5.59211 5.67683 5.77583 5.78294 5.96697 6.07356 6.10605 6.21893 6.42549 6.64414 6.70591 7.37335 7.47973 7.98820 8.14622 8.38704 9.07063 9.59850 10.64580 10.83605 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.019917 B = 0.004100 C = 0.003776 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1405.521694 B = 6828.118027 C = 7413.251824 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.053 3.947 3 O -0.293 6.293 4 C 0.159 3.841 5 C -0.208 4.208 6 C 0.002 3.998 7 Cl -0.077 7.077 8 C -0.151 4.151 9 C -0.055 4.055 10 C -0.116 4.116 11 C 0.180 3.820 12 N -0.758 5.758 13 C 0.557 3.443 14 O -0.582 6.582 15 C -0.545 4.545 16 H 0.067 0.933 17 C 0.088 3.912 18 N -0.769 5.769 19 Si 0.906 3.094 20 H -0.273 1.273 21 H -0.280 1.280 22 H -0.265 1.265 23 H 0.075 0.925 24 H 0.071 0.929 25 H 0.067 0.933 26 H 0.059 0.941 27 H 0.061 0.939 28 H 0.136 0.864 29 H 0.133 0.867 30 H 0.141 0.859 31 H 0.062 0.938 32 H 0.057 0.943 33 H 0.380 0.620 34 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.748 -16.198 -3.719 18.781 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.022 4.022 3 O -0.206 6.206 4 C 0.112 3.888 5 C -0.228 4.228 6 C -0.025 4.025 7 Cl -0.048 7.048 8 C -0.170 4.170 9 C -0.074 4.074 10 C -0.117 4.117 11 C 0.055 3.945 12 N -0.413 5.413 13 C 0.361 3.639 14 O -0.465 6.465 15 C -0.582 4.582 16 H 0.085 0.915 17 C -0.131 4.131 18 N -0.397 5.397 19 Si 0.731 3.269 20 H -0.198 1.198 21 H -0.205 1.205 22 H -0.189 1.189 23 H 0.094 0.906 24 H 0.090 0.910 25 H 0.086 0.914 26 H 0.078 0.922 27 H 0.080 0.920 28 H 0.154 0.846 29 H 0.151 0.849 30 H 0.159 0.841 31 H 0.080 0.920 32 H 0.076 0.924 33 H 0.211 0.789 34 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 8.283 -15.466 -4.476 18.107 hybrid contribution 0.169 -0.588 1.216 1.361 sum 8.452 -16.054 -3.260 18.434 Atomic orbital electron populations 1.21766 0.92441 1.02521 1.04265 1.22829 0.96370 0.82006 1.01039 1.86294 1.17826 1.28841 1.87611 1.18700 0.82789 0.92789 0.94564 1.21016 0.92088 0.99028 1.10624 1.20579 0.90271 0.88266 1.03335 1.98357 1.65840 1.43659 1.96913 1.20919 1.00620 0.90238 1.05258 1.20957 0.91440 0.99065 0.95922 1.19761 0.94511 0.93097 1.04318 1.19619 0.94857 0.91705 0.88285 1.46121 1.53350 1.35301 1.06572 1.18211 0.77340 0.78315 0.90032 1.90595 1.60732 1.48428 1.46697 1.20869 1.34670 1.09005 0.93640 0.91494 1.25688 0.93972 0.95427 0.98012 1.70032 1.26573 1.11057 1.32081 0.86388 0.78148 0.79173 0.83200 1.19831 1.20493 1.18935 0.90592 0.90961 0.91362 0.92245 0.92049 0.84631 0.84891 0.84092 0.92027 0.92446 0.78937 0.92189 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.59 10.28 37.16 0.38 -1.21 16 2 C 0.05 0.59 5.46 37.16 0.20 0.79 16 3 O -0.29 -4.55 9.37 -19.42 -0.18 -4.73 16 4 C 0.16 2.36 6.66 -39.22 -0.26 2.10 16 5 C -0.21 -2.61 8.82 -39.40 -0.35 -2.96 16 6 C 0.00 0.03 6.32 -39.52 -0.25 -0.22 16 7 Cl -0.08 -0.81 28.95 -51.86 -1.50 -2.32 16 8 C -0.15 -1.79 9.83 -39.52 -0.39 -2.18 16 9 C -0.06 -0.73 9.66 -39.61 -0.38 -1.11 16 10 C -0.12 -1.82 5.26 -104.47 -0.55 -2.37 16 11 C 0.18 3.58 5.46 -5.20 -0.03 3.56 16 12 N -0.76 -17.44 5.54 -62.90 -0.35 -17.79 16 13 C 0.56 16.10 7.74 -12.98 -0.10 16.00 16 14 O -0.58 -19.07 15.05 5.20 0.08 -18.99 16 15 C -0.54 -15.60 9.53 -35.63 -0.34 -15.94 16 16 H 0.07 1.77 7.85 -52.49 -0.41 1.36 16 17 C 0.09 2.49 5.49 -17.37 -0.10 2.40 16 18 N -0.77 -23.26 11.85 55.55 0.66 -22.60 16 19 Si 0.91 20.31 29.56 -169.99 -5.03 15.29 16 20 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 21 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 22 H -0.27 -5.75 7.11 56.52 0.40 -5.35 16 23 H 0.08 0.58 8.14 -51.92 -0.42 0.16 16 24 H 0.07 0.86 8.14 -51.93 -0.42 0.43 16 25 H 0.07 0.75 8.14 -51.93 -0.42 0.33 16 26 H 0.06 0.56 7.66 -51.93 -0.40 0.16 16 27 H 0.06 0.61 7.66 -51.93 -0.40 0.21 16 28 H 0.14 1.44 6.30 -52.48 -0.33 1.11 16 29 H 0.13 1.29 8.06 -52.48 -0.42 0.86 16 30 H 0.14 1.67 8.03 -52.49 -0.42 1.24 16 31 H 0.06 1.34 7.85 -51.93 -0.41 0.93 16 32 H 0.06 1.16 8.00 -51.93 -0.42 0.74 16 33 H 0.38 7.97 8.44 -40.82 -0.34 7.62 16 34 H 0.27 7.32 8.29 -40.82 -0.34 6.99 16 LS Contribution 314.76 15.07 4.74 4.74 Total: -1.00 -34.38 314.76 -7.69 -42.07 By element: Atomic # 1 Polarization: 9.44 SS G_CDS: -3.95 Total: 5.49 kcal Atomic # 6 Polarization: 1.00 SS G_CDS: -2.16 Total: -1.16 kcal Atomic # 7 Polarization: -40.70 SS G_CDS: 0.31 Total: -40.39 kcal Atomic # 8 Polarization: -23.62 SS G_CDS: -0.10 Total: -23.73 kcal Atomic # 14 Polarization: 20.31 SS G_CDS: -5.03 Total: 15.29 kcal Atomic # 17 Polarization: -0.81 SS G_CDS: -1.50 Total: -2.32 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -34.38 -7.69 -42.07 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000185509367.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.591 kcal (2) G-P(sol) polarization free energy of solvation -34.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.969 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.689 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.067 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.658 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds