Wall clock time and date at job start Tue Mar 31 2020 05:30:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42898 * 109.47204 * 2 1 4 4 C 1.35922 * 117.00241 * 180.02562 * 3 2 1 5 5 C 1.38712 * 120.05692 * 0.02562 * 4 3 2 6 6 C 1.38152 * 119.95539 * 179.70611 * 5 4 3 7 7 C 1.38279 * 120.07551 * 0.55242 * 6 5 4 8 8 C 1.50700 * 119.93762 * 179.72726 * 7 6 5 9 9 N 1.46498 * 109.46769 * 269.72042 * 8 7 6 10 10 C 1.34777 * 119.99828 * 179.72341 * 9 8 7 11 11 O 1.21693 * 120.00014 * 0.28042 * 10 9 8 12 12 C 1.46373 * 120.00147 * 180.27610 * 10 9 8 13 13 H 1.08002 * 120.00141 * 0.02562 * 12 10 9 14 14 C 1.40050 * 120.00087 * 179.97438 * 12 10 9 15 15 N 1.30674 * 120.00151 * 0.02562 * 14 12 10 16 16 Si 1.86803 * 119.99913 * 179.97438 * 14 12 10 17 17 H 1.48504 * 109.46768 * 60.00340 * 16 14 12 18 18 H 1.48504 * 109.47036 * 180.02562 * 16 14 12 19 19 H 1.48493 * 109.47374 * 300.00617 * 16 14 12 20 20 C 1.38245 * 120.11907 * 359.44392 * 7 6 5 21 21 C 1.38251 * 120.04216 * 0.28137 * 20 7 6 22 22 Cl 1.73597 * 120.03727 * 180.02562 * 21 20 7 23 23 H 1.08994 * 109.47462 * 180.02562 * 1 2 3 24 24 H 1.09007 * 109.47173 * 300.00208 * 1 2 3 25 25 H 1.09003 * 109.47091 * 60.00007 * 1 2 3 26 26 H 1.09000 * 109.46956 * 239.99543 * 2 1 3 27 27 H 1.09003 * 109.47091 * 119.99993 * 2 1 3 28 28 H 1.08002 * 120.02160 * 359.97438 * 5 4 3 29 29 H 1.08000 * 119.96120 * 180.27209 * 6 5 4 30 30 H 1.09004 * 109.47210 * 149.72400 * 8 7 6 31 31 H 1.08994 * 109.47121 * 29.72369 * 8 7 6 32 32 H 0.97001 * 120.00384 * 0.02562 * 9 8 7 33 33 H 0.96991 * 119.99824 * 179.97438 * 15 14 12 34 34 H 1.07998 * 119.97619 * 180.25560 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.3538 1.5254 -0.0005 5 6 4.1999 0.4262 -0.0016 6 6 5.5692 0.6097 -0.0083 7 6 6.0972 1.8877 -0.0024 8 6 7.5913 2.0842 -0.0035 9 7 8.0765 2.1473 1.3774 10 6 9.3911 2.3144 1.6227 11 8 10.1745 2.4180 0.6972 12 6 9.8767 2.3715 3.0024 13 1 9.1816 2.2793 3.8238 14 6 11.2429 2.5446 3.2573 15 7 12.0841 2.6557 2.2635 16 14 11.8625 2.6181 5.0181 17 1 11.5253 1.3507 5.7147 18 1 13.3356 2.8062 5.0170 19 1 11.2191 3.7562 5.7221 20 6 5.2568 2.9854 -0.0014 21 6 3.8858 2.8075 -0.0004 22 17 2.8307 4.1860 0.0002 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3634 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 1.8933 -0.5139 -0.8899 27 1 1.8933 -0.5138 0.8900 28 1 3.7885 -0.5724 -0.0016 29 1 6.2280 -0.2461 -0.0136 30 1 7.8351 3.0142 -0.5171 31 1 8.0671 1.2494 -0.5180 32 1 7.4521 2.0645 2.1151 33 1 13.0302 2.7759 2.4401 34 1 5.6717 3.9825 -0.0010 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000258727409.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:30:21 Heat of formation + Delta-G solvation = -67.955334 kcal Electronic energy + Delta-G solvation = -18954.968403 eV Core-core repulsion = 15685.678742 eV Total energy + Delta-G solvation = -3269.289661 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.35632 -38.20547 -37.01554 -36.35089 -33.52220 -32.40369 -31.94606 -30.86308 -29.81113 -26.69183 -24.86702 -24.11294 -22.19124 -21.19291 -19.66942 -18.51091 -17.39322 -16.38480 -16.33701 -15.71028 -15.26752 -14.71863 -14.34929 -14.11003 -13.90314 -13.76117 -13.61387 -13.04323 -12.84637 -12.53172 -12.28590 -12.01623 -11.62456 -11.44096 -11.33390 -11.17089 -11.09232 -10.90518 -10.83925 -10.74446 -10.44238 -10.24803 -8.93328 -8.84481 -8.25870 -7.58139 -7.52778 -6.18338 -4.64178 1.11617 1.22796 2.17240 2.92245 3.16450 3.21243 3.23176 3.53009 4.12456 4.55680 4.58989 4.61086 4.69008 4.86953 4.90854 4.96636 5.14867 5.23733 5.28573 5.42891 5.46698 5.61077 5.71230 5.79850 5.97459 6.12070 6.17364 6.35160 6.60407 6.71875 7.13683 7.43607 7.91967 8.06743 8.32458 9.02443 9.52301 10.59591 10.77788 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.026136 B = 0.003294 C = 0.003221 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1071.060624 B = 8498.925649 C = 8689.749414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.053 3.947 3 O -0.307 6.307 4 C 0.134 3.866 5 C -0.200 4.200 6 C -0.059 4.059 7 C -0.111 4.111 8 C 0.174 3.826 9 N -0.764 5.764 10 C 0.555 3.445 11 O -0.581 6.581 12 C -0.545 4.545 13 H 0.067 0.933 14 C 0.088 3.912 15 N -0.768 5.768 16 Si 0.908 3.092 17 H -0.268 1.268 18 H -0.281 1.281 19 H -0.268 1.268 20 C -0.057 4.057 21 C -0.070 4.070 22 Cl -0.064 7.064 23 H 0.077 0.923 24 H 0.066 0.934 25 H 0.066 0.934 26 H 0.063 0.937 27 H 0.063 0.937 28 H 0.134 0.866 29 H 0.134 0.866 30 H 0.059 0.941 31 H 0.060 0.940 32 H 0.381 0.619 33 H 0.269 0.731 34 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.715 -4.846 -3.696 21.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.022 4.022 3 O -0.220 6.220 4 C 0.087 3.913 5 C -0.219 4.219 6 C -0.078 4.078 7 C -0.112 4.112 8 C 0.049 3.951 9 N -0.420 5.420 10 C 0.359 3.641 11 O -0.464 6.464 12 C -0.582 4.582 13 H 0.085 0.915 14 C -0.132 4.132 15 N -0.397 5.397 16 Si 0.733 3.267 17 H -0.193 1.193 18 H -0.206 1.206 19 H -0.193 1.193 20 C -0.076 4.076 21 C -0.097 4.097 22 Cl -0.035 7.035 23 H 0.096 0.904 24 H 0.085 0.915 25 H 0.085 0.915 26 H 0.081 0.919 27 H 0.082 0.918 28 H 0.152 0.848 29 H 0.152 0.848 30 H 0.077 0.923 31 H 0.078 0.922 32 H 0.213 0.787 33 H 0.080 0.920 34 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -20.178 -4.476 -4.470 21.147 hybrid contribution -0.063 -0.159 1.225 1.237 sum -20.241 -4.635 -3.245 21.017 Atomic orbital electron populations 1.21764 0.92665 1.02785 1.03616 1.22816 0.95951 0.81907 1.01544 1.86137 1.18222 1.29250 1.88429 1.18605 0.82997 0.92372 0.97296 1.21166 0.94061 0.97570 1.09103 1.21052 0.94082 0.97348 0.95281 1.20096 0.96689 0.92306 1.02093 1.19754 0.86168 1.01476 0.87677 1.46227 1.09681 1.81670 1.04388 1.18234 0.78905 0.76387 0.90575 1.90604 1.54387 1.54916 1.46456 1.20845 0.92943 1.53449 0.90948 0.91460 1.25707 0.96691 0.92679 0.98143 1.70007 1.03110 1.34727 1.31869 0.86430 0.77834 0.79430 0.83023 1.19293 1.20567 1.19266 1.20923 0.89647 1.00350 0.96708 1.20128 0.91147 0.86064 1.12335 1.98350 1.66137 1.41821 1.97190 0.90384 0.91457 0.91501 0.91924 0.91850 0.84776 0.84838 0.92280 0.92230 0.78731 0.92035 0.84065 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.94 10.28 37.16 0.38 -0.56 16 2 C 0.05 0.42 5.46 37.16 0.20 0.63 16 3 O -0.31 -3.60 9.60 -19.50 -0.19 -3.78 16 4 C 0.13 1.71 6.68 -39.19 -0.26 1.45 16 5 C -0.20 -2.32 9.04 -39.44 -0.36 -2.67 16 6 C -0.06 -0.77 9.69 -39.60 -0.38 -1.15 16 7 C -0.11 -1.66 5.25 -104.60 -0.55 -2.21 16 8 C 0.17 3.27 5.80 -5.19 -0.03 3.24 16 9 N -0.76 -16.90 5.54 -62.90 -0.35 -17.25 16 10 C 0.55 15.70 7.75 -12.99 -0.10 15.59 16 11 O -0.58 -18.72 15.02 5.20 0.08 -18.64 16 12 C -0.54 -15.36 9.54 -35.63 -0.34 -15.70 16 13 H 0.07 1.74 7.85 -52.49 -0.41 1.33 16 14 C 0.09 2.44 5.50 -17.36 -0.10 2.35 16 15 N -0.77 -23.04 11.83 55.55 0.66 -22.38 16 16 Si 0.91 20.12 29.56 -169.99 -5.02 15.10 16 17 H -0.27 -5.77 7.11 56.52 0.40 -5.37 16 18 H -0.28 -6.07 7.11 56.52 0.40 -5.67 16 19 H -0.27 -5.78 7.11 56.52 0.40 -5.38 16 20 C -0.06 -0.82 9.48 -39.57 -0.38 -1.19 16 21 C -0.07 -0.96 6.33 -39.36 -0.25 -1.21 16 22 Cl -0.06 -0.84 28.50 -51.86 -1.48 -2.32 16 23 H 0.08 0.33 8.14 -51.93 -0.42 -0.09 16 24 H 0.07 0.44 8.14 -51.92 -0.42 0.02 16 25 H 0.07 0.43 8.14 -51.93 -0.42 0.01 16 26 H 0.06 0.43 7.66 -51.93 -0.40 0.04 16 27 H 0.06 0.45 7.66 -51.93 -0.40 0.06 16 28 H 0.13 1.19 6.30 -52.49 -0.33 0.86 16 29 H 0.13 1.59 8.06 -52.49 -0.42 1.17 16 30 H 0.06 1.16 8.08 -51.93 -0.42 0.74 16 31 H 0.06 1.16 8.08 -51.93 -0.42 0.74 16 32 H 0.38 7.59 8.44 -40.82 -0.34 7.25 16 33 H 0.27 7.32 8.29 -40.82 -0.34 6.98 16 34 H 0.14 1.96 8.06 -52.49 -0.42 1.54 16 LS Contribution 315.09 15.07 4.75 4.75 Total: -1.00 -34.07 315.09 -7.68 -41.75 By element: Atomic # 1 Polarization: 8.18 SS G_CDS: -3.97 Total: 4.21 kcal Atomic # 6 Polarization: 0.72 SS G_CDS: -2.16 Total: -1.44 kcal Atomic # 7 Polarization: -39.94 SS G_CDS: 0.31 Total: -39.63 kcal Atomic # 8 Polarization: -22.32 SS G_CDS: -0.11 Total: -22.43 kcal Atomic # 14 Polarization: 20.12 SS G_CDS: -5.02 Total: 15.10 kcal Atomic # 17 Polarization: -0.84 SS G_CDS: -1.48 Total: -2.32 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -34.07 -7.68 -41.75 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258727409.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.204 kcal (2) G-P(sol) polarization free energy of solvation -34.069 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.273 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.682 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.751 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.955 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds