Wall clock time and date at job start Tue Mar 31 2020 05:39:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35915 * 117.00209 * 2 1 4 4 C 1.38783 * 120.00887 * 0.02562 * 3 2 1 5 5 C 1.38193 * 120.09267 * 180.02562 * 4 3 2 6 6 C 1.38243 * 120.11158 * 359.97438 * 5 4 3 7 7 Cl 1.73599 * 119.99035 * 180.02562 * 6 5 4 8 8 C 1.38979 * 120.01849 * 0.02562 * 6 5 4 9 9 N 1.39968 * 120.04636 * 179.97438 * 8 6 5 10 10 C 1.34775 * 120.00076 * 214.96982 * 9 8 6 11 11 O 1.21286 * 120.00138 * 355.51050 * 10 9 8 12 12 C 1.50706 * 119.99868 * 175.51460 * 10 9 8 13 13 C 1.53007 * 109.46912 * 179.97438 * 12 10 9 14 14 C 1.50696 * 109.46907 * 180.02562 * 13 12 10 15 15 H 1.07992 * 120.00178 * 359.97438 * 14 13 12 16 16 C 1.37882 * 119.99907 * 180.02562 * 14 13 12 17 17 N 1.31513 * 119.99820 * 179.97438 * 16 14 13 18 18 Si 1.86805 * 119.99804 * 359.97438 * 16 14 13 19 19 H 1.48501 * 109.47135 * 89.99970 * 18 16 14 20 20 H 1.48494 * 109.46859 * 209.99945 * 18 16 14 21 21 H 1.48503 * 109.47035 * 329.99990 * 18 16 14 22 22 C 1.38595 * 120.01242 * 180.31819 * 3 2 1 23 23 H 1.08997 * 109.47066 * 299.99730 * 1 2 3 24 24 H 1.09004 * 109.47117 * 60.00023 * 1 2 3 25 25 H 1.08998 * 109.47128 * 179.97438 * 1 2 3 26 26 H 1.07995 * 119.95488 * 359.97438 * 4 3 2 27 27 H 1.07996 * 119.94037 * 179.97438 * 5 4 3 28 28 H 0.97003 * 120.00289 * 34.96379 * 9 8 6 29 29 H 1.08993 * 109.46868 * 299.99339 * 12 10 9 30 30 H 1.08991 * 109.46986 * 60.00093 * 12 10 9 31 31 H 1.09001 * 109.47212 * 300.00120 * 13 12 10 32 32 H 1.09003 * 109.46597 * 60.00185 * 13 12 10 33 33 H 0.97000 * 119.99563 * 179.97438 * 17 16 14 34 34 H 1.08009 * 120.05605 * 359.97438 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2110 0.0000 4 6 1.2904 2.3751 0.0005 5 6 1.9160 3.6073 0.0000 6 6 3.2963 3.6843 -0.0005 7 17 4.0790 5.2338 -0.0005 8 6 4.0576 2.5215 -0.0011 9 7 5.4551 2.5988 -0.0022 10 6 6.1803 1.6810 -0.6716 11 8 5.6272 0.7425 -1.2049 12 6 7.6784 1.8208 -0.7576 13 6 8.2537 0.6562 -1.5661 14 6 9.7518 0.7957 -1.6514 15 1 10.2442 1.6315 -1.1770 16 6 10.4937 -0.1433 -2.3363 17 7 11.8010 -0.0213 -2.4112 18 14 9.6418 -1.5888 -3.1576 19 1 9.2789 -1.2232 -4.5504 20 1 10.5573 -2.7579 -3.1752 21 1 8.4122 -1.9343 -2.4000 22 6 3.4301 1.2838 -0.0067 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0276 -0.0005 26 1 0.2120 2.3179 0.0005 27 1 1.3256 4.5115 0.0000 28 1 5.9018 3.3130 0.4789 29 1 7.9279 2.7619 -1.2475 30 1 8.1024 1.8102 0.2464 31 1 8.0042 -0.2848 -1.0758 32 1 7.8296 0.6665 -2.5701 33 1 12.3229 -0.6821 -2.8927 34 1 4.0194 0.3786 -0.0114 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000291517050.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:39:56 Heat of formation + Delta-G solvation = -59.827769 kcal Electronic energy + Delta-G solvation = -19245.226675 eV Core-core repulsion = 15976.289452 eV Total energy + Delta-G solvation = -3268.937223 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.76127 -39.53396 -37.75823 -36.32942 -34.53861 -33.57176 -31.52024 -30.73087 -29.39511 -27.50251 -26.15825 -23.45516 -22.38243 -21.11006 -19.85164 -18.66755 -17.44023 -16.73773 -16.52645 -16.17692 -16.06201 -15.81757 -15.16430 -14.19428 -14.04464 -13.98019 -13.57528 -13.41595 -12.81747 -12.64385 -12.58944 -12.56032 -12.13160 -11.56677 -11.45390 -11.10806 -11.03032 -10.95463 -10.32460 -10.22684 -10.10058 -9.81181 -9.38368 -9.21963 -8.57654 -8.52442 -8.15792 -6.04792 -4.04097 0.96365 1.08309 1.99039 2.82617 2.85763 3.28087 3.37141 3.43924 3.51342 3.54015 4.48158 4.49278 4.71990 4.79374 4.86966 4.96941 5.10261 5.19948 5.21478 5.30587 5.66815 5.71891 5.91366 5.95270 5.99209 6.08978 6.15220 6.59074 6.64374 7.14596 7.30401 7.37434 7.44199 7.75034 8.32883 8.50165 8.97735 9.57813 11.07928 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.019022 B = 0.004211 C = 0.003512 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1471.654809 B = 6647.285761 C = 7969.979676 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.310 6.310 3 C 0.152 3.848 4 C -0.221 4.221 5 C -0.052 4.052 6 C -0.106 4.106 7 Cl -0.067 7.067 8 C 0.208 3.792 9 N -0.680 5.680 10 C 0.512 3.488 11 O -0.513 6.513 12 C -0.120 4.120 13 C 0.001 3.999 14 C -0.526 4.526 15 H 0.074 0.926 16 C 0.070 3.930 17 N -0.902 5.902 18 Si 0.877 3.123 19 H -0.276 1.276 20 H -0.288 1.288 21 H -0.261 1.261 22 C -0.149 4.149 23 H 0.056 0.944 24 H 0.056 0.944 25 H 0.101 0.899 26 H 0.135 0.865 27 H 0.138 0.862 28 H 0.415 0.585 29 H 0.092 0.908 30 H 0.092 0.908 31 H 0.025 0.975 32 H 0.020 0.980 33 H 0.264 0.736 34 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -23.885 7.689 7.639 26.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.241 4.241 5 C -0.071 4.071 6 C -0.136 4.136 7 Cl -0.039 7.039 8 C 0.111 3.889 9 N -0.326 5.326 10 C 0.302 3.698 11 O -0.386 6.386 12 C -0.160 4.160 13 C -0.037 4.037 14 C -0.564 4.564 15 H 0.092 0.908 16 C -0.131 4.131 17 N -0.541 5.541 18 Si 0.704 3.296 19 H -0.202 1.202 20 H -0.214 1.214 21 H -0.185 1.185 22 C -0.170 4.170 23 H 0.075 0.925 24 H 0.075 0.925 25 H 0.119 0.881 26 H 0.153 0.847 27 H 0.155 0.845 28 H 0.252 0.748 29 H 0.110 0.890 30 H 0.110 0.890 31 H 0.044 0.956 32 H 0.039 0.961 33 H 0.073 0.927 34 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -23.857 6.840 7.144 25.826 hybrid contribution -0.316 -0.017 -0.266 0.414 sum -24.173 6.824 6.878 26.043 Atomic orbital electron populations 1.23097 0.78249 1.04142 1.01375 1.86135 1.21424 1.26522 1.88203 1.18853 0.91815 0.84324 0.94459 1.21101 1.00226 0.91474 1.11306 1.20576 0.91550 0.98039 0.96922 1.20609 0.92924 0.85486 1.14563 1.98354 1.80929 1.27241 1.97352 1.17177 0.83883 0.91319 0.96562 1.43957 1.03369 1.32408 1.52880 1.21906 0.91380 0.80633 0.75898 1.90672 1.72847 1.30615 1.44474 1.21730 0.86587 1.03897 1.03784 1.19399 0.96290 0.92806 0.95194 1.21074 0.89531 1.11160 1.34662 0.90838 1.24964 0.94672 0.97826 0.95683 1.69908 1.05256 1.36178 1.42746 0.86805 0.80026 0.82335 0.80448 1.20216 1.21398 1.18516 1.20497 0.91721 0.98223 1.06557 0.92527 0.92494 0.88099 0.84681 0.84465 0.74824 0.88976 0.88985 0.95648 0.96117 0.92667 0.82354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.19 9.81 101.05 0.99 1.18 16 2 O -0.31 -3.76 10.49 -19.47 -0.20 -3.97 16 3 C 0.15 1.94 6.68 -39.25 -0.26 1.68 16 4 C -0.22 -2.22 9.04 -39.40 -0.36 -2.58 16 5 C -0.05 -0.52 9.82 -39.60 -0.39 -0.91 16 6 C -0.11 -1.28 6.34 -39.30 -0.25 -1.53 16 7 Cl -0.07 -0.73 27.95 -51.86 -1.45 -2.18 16 8 C 0.21 2.94 6.30 -83.67 -0.53 2.41 16 9 N -0.68 -9.65 5.04 -9.85 -0.05 -9.70 16 10 C 0.51 9.13 7.67 -10.98 -0.08 9.05 16 11 O -0.51 -10.90 13.40 5.55 0.07 -10.83 16 12 C -0.12 -2.25 5.64 -27.88 -0.16 -2.41 16 13 C 0.00 0.02 3.33 -27.88 -0.09 -0.07 16 14 C -0.53 -14.87 9.66 -34.44 -0.33 -15.20 16 15 H 0.07 2.16 7.99 -52.49 -0.42 1.75 16 16 C 0.07 2.06 5.47 -17.82 -0.10 1.96 16 17 N -0.90 -27.82 13.96 55.43 0.77 -27.05 16 18 Si 0.88 22.44 27.47 -169.99 -4.67 17.77 16 19 H -0.28 -6.99 7.11 56.52 0.40 -6.58 16 20 H -0.29 -7.23 7.11 56.52 0.40 -6.83 16 21 H -0.26 -6.62 6.54 56.52 0.37 -6.25 16 22 C -0.15 -2.24 8.64 -39.25 -0.34 -2.58 16 23 H 0.06 0.31 7.66 -51.93 -0.40 -0.09 16 24 H 0.06 0.34 7.66 -51.93 -0.40 -0.06 16 25 H 0.10 0.53 8.14 -51.93 -0.42 0.11 16 26 H 0.14 0.95 6.29 -52.49 -0.33 0.62 16 27 H 0.14 1.03 8.06 -52.49 -0.42 0.60 16 28 H 0.41 4.77 8.08 -40.82 -0.33 4.44 16 29 H 0.09 1.60 8.14 -51.93 -0.42 1.17 16 30 H 0.09 1.56 8.14 -51.93 -0.42 1.14 16 31 H 0.03 0.64 7.16 -51.93 -0.37 0.27 16 32 H 0.02 0.52 7.53 -51.93 -0.39 0.13 16 33 H 0.26 7.63 8.31 -40.82 -0.34 7.29 16 34 H 0.16 2.74 6.20 -52.48 -0.33 2.42 16 LS Contribution 306.81 15.07 4.62 4.62 Total: -1.00 -33.60 306.81 -6.62 -40.21 By element: Atomic # 1 Polarization: 3.94 SS G_CDS: -3.82 Total: 0.12 kcal Atomic # 6 Polarization: -7.11 SS G_CDS: -1.90 Total: -9.00 kcal Atomic # 7 Polarization: -37.48 SS G_CDS: 0.72 Total: -36.75 kcal Atomic # 8 Polarization: -14.66 SS G_CDS: -0.13 Total: -14.79 kcal Atomic # 14 Polarization: 22.44 SS G_CDS: -4.67 Total: 17.77 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.45 Total: -2.18 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -33.60 -6.62 -40.21 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291517050.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.614 kcal (2) G-P(sol) polarization free energy of solvation -33.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.211 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.214 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds