Wall clock time and date at job start Tue Mar 31 2020 05:39:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35910 * 116.99868 * 2 1 4 4 C 1.38836 * 119.97790 * 359.97438 * 3 2 1 5 5 C 1.38348 * 120.22808 * 180.02562 * 4 3 2 6 6 Cl 1.73601 * 119.90950 * 180.02562 * 5 4 3 7 7 C 1.38136 * 120.17858 * 0.02562 * 5 4 3 8 8 C 1.39539 * 119.95300 * 359.97438 * 7 5 4 9 9 C 1.47865 * 120.11513 * 180.02562 * 8 7 5 10 10 O 1.21551 * 120.00185 * 179.97438 * 9 8 7 11 11 N 1.34778 * 119.99766 * 359.97438 * 9 8 7 12 12 C 1.46493 * 119.99962 * 179.97438 * 11 9 8 13 13 C 1.53002 * 109.46925 * 179.97438 * 12 11 9 14 14 C 1.50700 * 109.46934 * 180.02562 * 13 12 11 15 15 H 1.07994 * 120.00310 * 0.02562 * 14 13 12 16 16 C 1.37879 * 119.99889 * 180.02562 * 14 13 12 17 17 N 1.31512 * 120.00342 * 359.97438 * 16 14 13 18 18 Si 1.86805 * 120.00025 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.47048 * 0.02562 * 18 16 14 20 20 H 1.48500 * 109.46804 * 119.99809 * 18 16 14 21 21 H 1.48496 * 109.47482 * 239.99783 * 18 16 14 22 22 C 1.38459 * 119.98211 * 179.97438 * 3 2 1 23 23 H 1.08998 * 109.47285 * 60.00014 * 1 2 3 24 24 H 1.09003 * 109.46954 * 180.02562 * 1 2 3 25 25 H 1.08994 * 109.47076 * 299.99989 * 1 2 3 26 26 H 1.07998 * 119.88105 * 0.02562 * 4 3 2 27 27 H 1.07999 * 120.01921 * 180.02562 * 7 5 4 28 28 H 0.97008 * 119.99971 * 0.02562 * 11 9 8 29 29 H 1.08998 * 109.47310 * 299.99836 * 12 11 9 30 30 H 1.09003 * 109.47127 * 60.00410 * 12 11 9 31 31 H 1.08998 * 109.47255 * 300.00192 * 13 12 11 32 32 H 1.08997 * 109.47277 * 60.00236 * 13 12 11 33 33 H 0.97003 * 120.00600 * 179.97438 * 17 16 14 34 34 H 1.08008 * 120.08792 * 0.25681 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2110 0.0000 4 6 1.2893 2.3750 -0.0005 5 6 1.9120 3.6105 -0.0011 6 17 0.9578 5.0608 -0.0011 7 6 3.2909 3.6931 -0.0016 8 6 4.0587 2.5280 -0.0011 9 6 5.5349 2.6123 -0.0011 10 8 6.2017 1.5960 -0.0001 11 7 6.1411 3.8160 -0.0021 12 6 7.6037 3.8996 -0.0016 13 6 8.0305 5.3688 -0.0036 14 6 9.5351 5.4548 -0.0037 15 1 10.1276 4.5519 -0.0028 16 6 10.1552 6.6863 -0.0048 17 7 9.4338 7.7859 -0.0064 18 14 12.0202 6.7929 -0.0042 19 1 12.5943 5.4233 -0.0030 20 1 12.4749 7.5186 -1.2174 21 1 12.4740 7.5214 1.2076 22 6 3.4287 1.2830 0.0005 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8899 26 1 0.2110 2.3158 -0.0005 27 1 3.7743 4.6589 -0.0016 28 1 5.6090 4.6271 -0.0025 29 1 7.9954 3.4083 0.8891 30 1 7.9961 3.4064 -0.8909 31 1 7.6389 5.8597 -0.8945 32 1 7.6381 5.8625 0.8854 33 1 9.8701 8.6522 -0.0069 34 1 4.0181 0.3780 -0.0032 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000293538849.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:39:21 Heat of formation + Delta-G solvation = -65.802431 kcal Electronic energy + Delta-G solvation = -18806.635495 eV Core-core repulsion = 15537.439191 eV Total energy + Delta-G solvation = -3269.196304 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.66999 -39.30936 -37.67089 -36.44263 -34.99427 -32.93931 -31.40631 -30.82579 -29.33559 -27.69025 -25.24171 -23.45592 -22.79783 -21.07127 -20.38119 -18.71150 -17.00911 -16.56752 -16.25729 -16.19710 -16.15042 -15.36253 -15.00952 -14.66040 -14.47462 -14.05219 -13.67360 -13.46841 -13.01703 -12.66798 -12.34546 -12.27612 -12.20354 -11.52724 -11.32150 -11.20760 -11.11872 -11.02146 -10.64408 -10.37881 -9.95524 -9.55777 -9.25229 -9.22485 -8.63117 -8.58247 -8.39367 -6.10704 -4.13623 0.50952 0.92473 1.76505 2.78054 2.79680 3.28048 3.35620 3.40196 3.56198 3.66817 4.38815 4.45124 4.52056 4.72833 4.75868 4.76795 4.94184 5.07859 5.10960 5.25962 5.26601 5.74122 5.81028 5.98565 6.09156 6.30460 6.32136 6.68572 6.79751 6.93608 7.48754 7.58538 7.86086 7.88992 8.24554 8.48735 8.92425 9.51456 11.00907 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.025507 B = 0.003239 C = 0.002882 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1097.494404 B = 8642.765415 C = 9714.512093 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.309 6.309 3 C 0.133 3.867 4 C -0.184 4.184 5 C -0.002 4.002 6 Cl -0.060 7.060 7 C -0.115 4.115 8 C -0.073 4.073 9 C 0.550 3.450 10 O -0.538 6.538 11 N -0.712 5.712 12 C 0.120 3.880 13 C 0.011 3.989 14 C -0.521 4.521 15 H 0.060 0.940 16 C 0.059 3.941 17 N -0.894 5.894 18 Si 0.897 3.103 19 H -0.271 1.271 20 H -0.283 1.283 21 H -0.283 1.283 22 C -0.090 4.090 23 H 0.058 0.942 24 H 0.103 0.897 25 H 0.058 0.942 26 H 0.142 0.858 27 H 0.143 0.857 28 H 0.398 0.602 29 H 0.060 0.940 30 H 0.060 0.940 31 H 0.023 0.977 32 H 0.023 0.977 33 H 0.262 0.738 34 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.569 -9.926 0.012 23.743 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.222 6.222 3 C 0.087 3.913 4 C -0.204 4.204 5 C -0.029 4.029 6 Cl -0.031 7.031 7 C -0.135 4.135 8 C -0.076 4.076 9 C 0.335 3.665 10 O -0.417 6.417 11 N -0.362 5.362 12 C -0.001 4.001 13 C -0.026 4.026 14 C -0.560 4.560 15 H 0.079 0.921 16 C -0.143 4.143 17 N -0.532 5.532 18 Si 0.724 3.276 19 H -0.196 1.196 20 H -0.209 1.209 21 H -0.209 1.209 22 C -0.110 4.110 23 H 0.076 0.924 24 H 0.121 0.879 25 H 0.076 0.924 26 H 0.159 0.841 27 H 0.161 0.839 28 H 0.233 0.767 29 H 0.078 0.922 30 H 0.078 0.922 31 H 0.042 0.958 32 H 0.042 0.958 33 H 0.071 0.929 34 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -21.034 -10.505 0.011 23.511 hybrid contribution 0.289 0.971 0.000 1.013 sum -20.745 -9.534 0.011 22.831 Atomic orbital electron populations 1.23136 0.78013 1.04366 1.01578 1.86138 1.21639 1.25860 1.88576 1.18653 0.91795 0.84067 0.96793 1.21203 1.00851 0.90576 1.07761 1.20451 0.91549 0.87610 1.03265 1.98392 1.71777 1.36119 1.96795 1.21205 0.91650 0.99182 1.01459 1.19832 0.93977 0.92539 1.01286 1.18028 0.86356 0.84395 0.77733 1.90770 1.65705 1.34920 1.50282 1.46295 1.09907 1.07216 1.72736 1.21819 0.75589 1.01559 1.01165 1.19347 0.97085 0.88218 0.97973 1.21073 0.90977 0.92618 1.51331 0.92129 1.24998 0.98631 0.95702 0.94961 1.69960 1.35351 0.97552 1.50377 0.86455 0.85232 0.78257 0.77620 1.19560 1.20934 1.20929 1.20596 0.91169 0.98721 1.00482 0.92377 0.87852 0.92384 0.84064 0.83924 0.76688 0.92152 0.92152 0.95829 0.95828 0.92869 0.83072 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.14 9.81 101.05 0.99 1.13 16 2 O -0.31 -3.08 10.49 -19.46 -0.20 -3.28 16 3 C 0.13 1.47 6.68 -39.28 -0.26 1.20 16 4 C -0.18 -1.80 8.81 -39.32 -0.35 -2.15 16 5 C 0.00 -0.02 6.31 -39.58 -0.25 -0.27 16 6 Cl -0.06 -0.60 28.95 -51.86 -1.50 -2.10 16 7 C -0.12 -1.38 9.32 -39.13 -0.36 -1.75 16 8 C -0.07 -1.01 5.87 -104.99 -0.62 -1.63 16 9 C 0.55 9.49 7.77 -12.32 -0.10 9.39 16 10 O -0.54 -11.04 16.35 5.32 0.09 -10.95 16 11 N -0.71 -12.38 5.51 -61.25 -0.34 -12.71 16 12 C 0.12 2.52 5.61 -4.04 -0.02 2.50 16 13 C 0.01 0.27 5.09 -27.88 -0.14 0.13 16 14 C -0.52 -14.31 9.11 -34.44 -0.31 -14.63 16 15 H 0.06 1.63 7.74 -52.49 -0.41 1.23 16 16 C 0.06 1.64 5.46 -17.82 -0.10 1.54 16 17 N -0.89 -25.92 13.29 55.43 0.74 -25.19 16 18 Si 0.90 21.26 29.54 -169.99 -5.02 16.24 16 19 H -0.27 -6.33 7.11 56.52 0.40 -5.92 16 20 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 21 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 22 C -0.09 -1.17 9.53 -39.02 -0.37 -1.54 16 23 H 0.06 0.27 7.66 -51.93 -0.40 -0.13 16 24 H 0.10 0.38 8.14 -51.93 -0.42 -0.04 16 25 H 0.06 0.27 7.66 -51.93 -0.40 -0.13 16 26 H 0.14 1.02 6.28 -52.49 -0.33 0.70 16 27 H 0.14 1.56 6.40 -52.49 -0.34 1.23 16 28 H 0.40 5.99 6.50 -40.82 -0.27 5.73 16 29 H 0.06 1.30 8.14 -51.93 -0.42 0.88 16 30 H 0.06 1.30 8.14 -51.93 -0.42 0.88 16 31 H 0.02 0.60 8.14 -51.93 -0.42 0.17 16 32 H 0.02 0.60 8.14 -51.93 -0.42 0.17 16 33 H 0.26 7.16 8.31 -40.82 -0.34 6.82 16 34 H 0.15 2.02 7.65 -52.48 -0.40 1.62 16 LS Contribution 313.71 15.07 4.73 4.73 Total: -1.00 -31.43 313.71 -7.19 -38.62 By element: Atomic # 1 Polarization: 4.49 SS G_CDS: -3.78 Total: 0.71 kcal Atomic # 6 Polarization: -4.17 SS G_CDS: -1.89 Total: -6.07 kcal Atomic # 7 Polarization: -38.30 SS G_CDS: 0.40 Total: -37.90 kcal Atomic # 8 Polarization: -14.12 SS G_CDS: -0.12 Total: -14.23 kcal Atomic # 14 Polarization: 21.26 SS G_CDS: -5.02 Total: 16.24 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.50 Total: -2.10 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -31.43 -7.19 -38.62 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000293538849.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.183 kcal (2) G-P(sol) polarization free energy of solvation -31.433 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.616 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.186 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.619 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.802 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds