Wall clock time and date at job start Tue Mar 31 2020 06:14:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30417 * 125.96568 * 2 1 4 4 N 1.39906 * 109.03785 * 180.02562 * 3 2 1 5 5 C 1.46509 * 125.73565 * 179.97438 * 4 3 2 6 6 C 1.34486 * 108.52873 * 359.72668 * 4 3 2 7 7 Cl 1.73603 * 126.34840 * 180.26225 * 6 4 3 8 8 C 1.38554 * 107.30029 * 0.42970 * 6 4 3 9 9 C 1.46821 * 126.46634 * 179.83660 * 8 6 4 10 10 C 1.35268 * 119.99800 * 309.96302 * 9 8 6 11 11 C 1.41556 * 120.00012 * 179.72197 * 10 9 8 12 12 O 1.21802 * 120.00150 * 0.02562 * 11 10 9 13 13 N 1.34778 * 120.00008 * 180.02562 * 11 10 9 14 14 C 1.46501 * 120.00279 * 359.97438 * 13 11 10 15 15 C 1.36824 * 120.00079 * 180.02562 * 13 11 10 16 16 H 1.08005 * 119.99965 * 25.62849 * 15 13 11 17 17 C 1.39034 * 120.00056 * 205.63003 * 15 13 11 18 18 N 1.31373 * 120.00076 * 11.35219 * 17 15 13 19 19 Si 1.86807 * 120.00042 * 191.35335 * 17 15 13 20 20 H 1.48501 * 109.46823 * 0.02562 * 19 17 15 21 21 H 1.48492 * 109.47164 * 119.99878 * 19 17 15 22 22 H 1.48502 * 109.46870 * 240.00068 * 19 17 15 23 23 H 1.09004 * 109.46797 * 269.97324 * 1 2 3 24 24 H 1.08993 * 109.47622 * 29.98045 * 1 2 3 25 25 H 1.09002 * 109.46560 * 149.97732 * 1 2 3 26 26 H 1.09001 * 109.46745 * 90.02666 * 5 4 3 27 27 H 1.08993 * 109.46782 * 210.02529 * 5 4 3 28 28 H 1.08998 * 109.46958 * 330.02663 * 5 4 3 29 29 H 1.07994 * 119.99937 * 129.68918 * 9 8 6 30 30 H 1.08004 * 120.00163 * 359.72601 * 10 9 8 31 31 H 1.09005 * 109.46956 * 84.88157 * 14 13 11 32 32 H 1.08996 * 109.47580 * 204.88761 * 14 13 11 33 33 H 1.09004 * 109.47055 * 324.88696 * 14 13 11 34 34 H 0.97002 * 120.00100 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2729 1.0556 0.0000 4 7 3.6114 0.6482 -0.0006 5 6 4.7762 1.5368 -0.0013 6 6 3.6489 -0.6961 0.0051 7 17 5.0754 -1.6856 0.0133 8 6 2.3381 -1.1450 -0.0006 9 6 1.8951 -2.5447 -0.0008 10 6 2.4127 -3.4178 -0.8949 11 6 1.9899 -4.7688 -0.8913 12 8 1.1597 -5.1449 -0.0834 13 7 2.5060 -5.6388 -1.7819 14 6 3.5041 -5.1863 -2.7542 15 6 2.0969 -6.9445 -1.7788 16 1 1.1217 -7.2039 -1.3938 17 6 2.9366 -7.9372 -2.2712 18 7 4.1952 -7.6640 -2.5306 19 14 2.2752 -9.6596 -2.5639 20 1 0.8372 -9.7067 -2.1961 21 1 2.4307 -10.0124 -3.9978 22 1 3.0318 -10.6285 -1.7307 23 1 -0.3633 -0.0005 1.0277 24 1 -0.3634 0.8901 -0.5135 25 1 -0.3632 -0.8898 -0.5142 26 1 5.0659 1.7569 1.0262 27 1 5.6044 1.0496 -0.5158 28 1 4.5249 2.4648 -0.5148 29 1 1.1592 -2.8783 0.7159 30 1 3.1486 -3.0842 -1.6116 31 1 4.4948 -5.2212 -2.3008 32 1 3.4813 -5.8372 -3.6281 33 1 3.2789 -4.1636 -3.0569 34 1 4.7809 -8.3565 -2.8744 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299519402.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:14:16 Heat of formation + Delta-G solvation = 64.074313 kcal Electronic energy + Delta-G solvation = -19528.062934 eV Core-core repulsion = 16296.791260 eV Total energy + Delta-G solvation = -3231.271674 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.083 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.23708 -38.52103 -36.88079 -34.91065 -34.33855 -32.68320 -31.59395 -29.84633 -28.88982 -26.48246 -25.78358 -24.54632 -22.54206 -20.58120 -19.77314 -17.98644 -17.16580 -16.80951 -16.14634 -15.85467 -14.91979 -14.55383 -14.19576 -13.89525 -13.65582 -13.63234 -13.15512 -12.80129 -12.64783 -12.57976 -12.32116 -11.94894 -11.73085 -11.68370 -11.46793 -11.24513 -11.02545 -10.77231 -10.64090 -10.31893 -10.29068 -9.27709 -9.21996 -9.01962 -8.36438 -7.87586 -7.60698 -6.35797 -3.85065 1.37846 1.42543 1.93835 2.53807 2.78929 3.18704 3.25337 3.32659 4.14139 4.25877 4.52088 4.78477 4.89434 5.01947 5.08839 5.15237 5.22166 5.43327 5.55246 5.62769 5.81107 5.85606 5.89845 6.23368 6.42355 6.55085 6.60051 6.85609 6.98900 7.09298 7.21437 7.51464 7.53803 8.19074 8.52396 9.21641 9.43295 10.06385 10.68397 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.027383 B = 0.004291 C = 0.003845 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1022.296549 B = 6523.801980 C = 7279.564430 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 C 0.099 3.901 3 N -0.284 5.284 4 N -0.364 5.364 5 C 0.097 3.903 6 C 0.122 3.878 7 Cl 0.009 6.991 8 C -0.173 4.173 9 C -0.046 4.046 10 C -0.156 4.156 11 C 0.466 3.534 12 O -0.600 6.600 13 N -0.434 5.434 14 C 0.110 3.890 15 C -0.297 4.297 16 H 0.101 0.899 17 C 0.029 3.971 18 N -0.876 5.876 19 Si 0.927 3.073 20 H -0.266 1.266 21 H -0.280 1.280 22 H -0.281 1.281 23 H 0.081 0.919 24 H 0.074 0.926 25 H 0.086 0.914 26 H 0.078 0.922 27 H 0.089 0.911 28 H 0.094 0.906 29 H 0.135 0.865 30 H 0.112 0.888 31 H 0.051 0.949 32 H 0.075 0.925 33 H 0.028 0.972 34 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.399 16.487 1.652 16.742 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.067 4.067 3 N -0.107 5.107 4 N -0.147 5.147 5 C -0.044 4.044 6 C -0.032 4.032 7 Cl 0.037 6.963 8 C -0.185 4.185 9 C -0.069 4.069 10 C -0.178 4.178 11 C 0.258 3.742 12 O -0.488 6.488 13 N -0.150 5.150 14 C -0.034 4.034 15 C -0.425 4.425 16 H 0.119 0.881 17 C -0.175 4.175 18 N -0.514 5.514 19 Si 0.754 3.246 20 H -0.190 1.190 21 H -0.206 1.206 22 H -0.207 1.207 23 H 0.100 0.900 24 H 0.093 0.907 25 H 0.105 0.895 26 H 0.096 0.904 27 H 0.107 0.893 28 H 0.113 0.887 29 H 0.152 0.848 30 H 0.129 0.871 31 H 0.070 0.930 32 H 0.093 0.907 33 H 0.047 0.953 34 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 2.503 17.425 1.909 17.707 hybrid contribution 0.540 -1.728 -0.293 1.833 sum 3.043 15.698 1.616 16.071 Atomic orbital electron populations 1.20250 0.85624 1.03891 1.03477 1.22463 0.97100 0.89080 0.98041 1.77125 0.85024 1.22139 1.26420 1.48180 1.06216 1.02806 1.57544 1.21945 0.84234 0.94412 1.03794 1.22278 0.90442 0.83838 1.06634 1.98435 1.35411 1.65709 1.96785 1.19064 0.88743 0.95093 1.15646 1.21271 0.99294 0.87829 0.98474 1.22258 1.01046 0.94746 0.99747 1.16800 0.87433 0.86422 0.83511 1.90641 1.37151 1.80179 1.40819 1.43610 1.35721 1.08886 1.26800 1.21528 0.92102 0.95840 0.93960 1.19767 1.01441 0.81636 1.39685 0.88147 1.25433 0.94618 1.00157 0.97295 1.69984 1.03917 1.34607 1.42926 0.85840 0.79422 0.81492 0.77869 1.19048 1.20621 1.20655 0.90022 0.90699 0.89483 0.90352 0.89270 0.88709 0.84765 0.87055 0.92996 0.90674 0.95347 0.92157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.81 10.28 36.00 0.37 -0.44 16 2 C 0.10 1.42 7.27 -81.96 -0.60 0.83 16 3 N -0.28 -4.07 12.49 33.93 0.42 -3.64 16 4 N -0.36 -4.77 3.99 -64.21 -0.26 -5.03 16 5 C 0.10 0.80 11.28 59.85 0.67 1.48 16 6 C 0.12 1.80 7.49 -16.27 -0.12 1.68 16 7 Cl 0.01 0.12 27.77 -51.86 -1.44 -1.32 16 8 C -0.17 -2.78 5.84 -105.07 -0.61 -3.39 16 9 C -0.05 -0.84 9.18 -37.17 -0.34 -1.19 16 10 C -0.16 -3.22 8.07 -39.38 -0.32 -3.54 16 11 C 0.47 11.93 7.40 -14.99 -0.11 11.82 16 12 O -0.60 -17.20 15.83 5.10 0.08 -17.12 16 13 N -0.43 -11.48 3.00 -125.48 -0.38 -11.86 16 14 C 0.11 2.51 8.25 59.85 0.49 3.01 16 15 C -0.30 -8.39 9.21 -15.03 -0.14 -8.53 16 16 H 0.10 2.96 7.46 -52.48 -0.39 2.56 16 17 C 0.03 0.76 5.06 -17.45 -0.09 0.68 16 18 N -0.88 -23.44 10.84 55.50 0.60 -22.83 16 19 Si 0.93 20.72 29.57 -169.99 -5.03 15.69 16 20 H -0.27 -5.95 7.11 56.52 0.40 -5.54 16 21 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 22 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 23 H 0.08 0.78 8.14 -51.93 -0.42 0.36 16 24 H 0.07 0.71 8.14 -51.93 -0.42 0.28 16 25 H 0.09 0.97 8.01 -51.93 -0.42 0.55 16 26 H 0.08 0.53 8.14 -51.93 -0.42 0.11 16 27 H 0.09 0.62 7.79 -51.93 -0.40 0.21 16 28 H 0.09 0.64 8.14 -51.93 -0.42 0.22 16 29 H 0.13 2.55 7.45 -52.49 -0.39 2.16 16 30 H 0.11 2.12 5.96 -52.48 -0.31 1.81 16 31 H 0.05 1.21 7.85 -51.93 -0.41 0.81 16 32 H 0.07 1.79 6.78 -51.93 -0.35 1.44 16 33 H 0.03 0.55 6.39 -51.93 -0.33 0.22 16 34 H 0.27 6.74 8.31 -40.82 -0.34 6.40 16 LS Contribution 312.69 15.07 4.71 4.71 Total: -1.00 -33.03 312.69 -5.90 -38.94 By element: Atomic # 1 Polarization: 3.90 SS G_CDS: -3.83 Total: 0.06 kcal Atomic # 6 Polarization: 3.19 SS G_CDS: -0.79 Total: 2.40 kcal Atomic # 7 Polarization: -43.75 SS G_CDS: 0.39 Total: -43.36 kcal Atomic # 8 Polarization: -17.20 SS G_CDS: 0.08 Total: -17.12 kcal Atomic # 14 Polarization: 20.72 SS G_CDS: -5.03 Total: 15.69 kcal Atomic # 17 Polarization: 0.12 SS G_CDS: -1.44 Total: -1.32 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -33.03 -5.90 -38.94 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299519402.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.010 kcal (2) G-P(sol) polarization free energy of solvation -33.033 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.903 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.936 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.074 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds