Wall clock time and date at job start Tue Mar 31 2020 05:27:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 H 1.08998 * 109.46936 * 2 1 4 4 O 1.42903 * 109.47065 * 240.00430 * 2 1 3 5 5 C 1.35926 * 117.00208 * 84.96314 * 4 2 1 6 6 C 1.38712 * 120.05853 * 354.65189 * 5 4 2 7 7 C 1.38147 * 119.95853 * 180.02562 * 6 5 4 8 8 C 1.38278 * 120.07659 * 359.97438 * 7 6 5 9 9 C 1.38242 * 120.12038 * 359.97438 * 8 7 6 10 10 C 1.38259 * 120.04124 * 0.29321 * 9 8 7 11 11 Cl 1.73597 * 120.03938 * 179.72455 * 10 9 8 12 12 C 1.50695 * 109.47155 * 120.00643 * 2 1 3 13 13 O 1.21289 * 120.00152 * 120.00076 * 12 2 1 14 14 N 1.34777 * 119.99703 * 299.99579 * 12 2 1 15 15 C 1.46495 * 120.00096 * 0.02562 * 14 12 2 16 16 C 1.37102 * 119.99981 * 180.02562 * 14 12 2 17 17 H 1.07994 * 119.99935 * 22.96828 * 16 14 12 18 18 C 1.38952 * 120.00083 * 202.97135 * 16 14 12 19 19 N 1.31416 * 119.99830 * 10.55275 * 18 16 14 20 20 Si 1.86795 * 120.00014 * 190.55287 * 18 16 14 21 21 H 1.48506 * 109.46900 * 59.99937 * 20 18 16 22 22 H 1.48494 * 109.47061 * 179.97438 * 20 18 16 23 23 H 1.48493 * 109.47136 * 299.99947 * 20 18 16 24 24 H 1.09000 * 109.47242 * 299.99592 * 1 2 3 25 25 H 1.09000 * 109.46879 * 59.99769 * 1 2 3 26 26 H 1.08993 * 109.46797 * 179.97438 * 1 2 3 27 27 H 1.08005 * 120.02242 * 359.97189 * 6 5 4 28 28 H 1.08003 * 119.96405 * 179.97438 * 7 6 5 29 29 H 1.07999 * 119.94309 * 180.02562 * 8 7 6 30 30 H 1.08005 * 119.98485 * 180.02562 * 9 8 7 31 31 H 1.09003 * 109.47363 * 92.98243 * 15 14 12 32 32 H 1.09007 * 109.47238 * 212.97956 * 15 14 12 33 33 H 1.09000 * 109.47249 * 332.97752 * 15 14 12 34 34 H 0.96995 * 119.99990 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 8 2.0064 -0.6736 -1.1669 5 6 2.1118 0.0627 -2.3046 6 6 1.6607 1.3742 -2.3278 7 6 1.7684 2.1204 -3.4854 8 6 2.3259 1.5616 -4.6207 9 6 2.7775 0.2551 -4.6009 10 6 2.6670 -0.4979 -3.4467 11 17 3.2276 -2.1407 -3.4239 12 6 2.0324 -0.7105 1.2303 13 8 2.7297 -1.6966 1.1190 14 7 1.7068 -0.2501 2.4545 15 6 0.8642 0.9407 2.5890 16 6 2.1642 -0.8962 3.5739 17 1 3.0483 -1.5138 3.5175 18 6 1.4902 -0.7564 4.7809 19 7 0.3088 -0.1815 4.8111 20 14 2.2634 -1.3855 6.3607 21 1 3.5565 -0.6919 6.5893 22 1 1.3498 -1.1168 7.5001 23 1 2.4989 -2.8474 6.2485 24 1 -0.3634 0.5138 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0276 -0.0005 27 1 1.2247 1.8114 -1.4417 28 1 1.4168 3.1414 -3.5037 29 1 2.4094 2.1470 -5.5244 30 1 3.2129 -0.1790 -5.4888 31 1 -0.1797 0.6393 2.6757 32 1 1.1577 1.4947 3.4807 33 1 0.9876 1.5743 1.7107 34 1 -0.1615 -0.0836 5.6537 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299539605.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:27:38 Heat of formation + Delta-G solvation = -34.067627 kcal Electronic energy + Delta-G solvation = -20038.869609 eV Core-core repulsion = 16771.049430 eV Total energy + Delta-G solvation = -3267.820179 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -40.33957 -38.65848 -37.09339 -36.17933 -34.71964 -32.40082 -31.09587 -30.62877 -29.50580 -26.32052 -25.21412 -23.73956 -22.70858 -21.98168 -19.23671 -18.31334 -16.97955 -16.28738 -16.19903 -15.64057 -15.25038 -14.72321 -14.51014 -14.28056 -13.94984 -13.82580 -13.28844 -13.07021 -12.57446 -12.10479 -11.96831 -11.89569 -11.53567 -11.39689 -11.28355 -11.22400 -10.99159 -10.77647 -10.66796 -10.57650 -10.41516 -10.28827 -9.06308 -8.92841 -8.44134 -8.06161 -7.76389 -6.37109 -3.94882 1.10220 1.31683 2.33633 3.13516 3.16462 3.22536 3.30293 3.59800 3.76807 4.12321 4.67140 4.75738 4.88376 4.96847 5.04230 5.17613 5.24662 5.37964 5.46020 5.52858 5.66393 5.91526 5.95536 6.08685 6.14081 6.16932 6.33774 6.44072 6.60829 6.75382 7.11641 7.46494 7.51602 8.05475 8.41768 9.11496 9.31679 9.87246 10.66553 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.029718 B = 0.004374 C = 0.003960 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 941.950581 B = 6400.111241 C = 7069.430757 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.074 3.926 3 H 0.084 0.916 4 O -0.268 6.268 5 C 0.151 3.849 6 C -0.206 4.206 7 C -0.075 4.075 8 C -0.158 4.158 9 C -0.074 4.074 10 C -0.074 4.074 11 Cl -0.055 7.055 12 C 0.450 3.550 13 O -0.564 6.564 14 N -0.440 5.440 15 C 0.108 3.892 16 C -0.305 4.305 17 H 0.100 0.900 18 C 0.032 3.968 19 N -0.884 5.884 20 Si 0.930 3.070 21 H -0.273 1.273 22 H -0.284 1.284 23 H -0.272 1.272 24 H 0.094 0.906 25 H 0.061 0.939 26 H 0.071 0.929 27 H 0.139 0.861 28 H 0.129 0.871 29 H 0.129 0.871 30 H 0.136 0.864 31 H 0.066 0.934 32 H 0.071 0.929 33 H 0.025 0.975 34 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.594 7.260 -14.547 16.269 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.014 3.986 3 H 0.101 0.899 4 O -0.179 6.179 5 C 0.103 3.897 6 C -0.225 4.225 7 C -0.093 4.093 8 C -0.177 4.177 9 C -0.093 4.093 10 C -0.102 4.102 11 Cl -0.026 7.026 12 C 0.237 3.763 13 O -0.446 6.446 14 N -0.161 5.161 15 C -0.036 4.036 16 C -0.433 4.433 17 H 0.117 0.883 18 C -0.171 4.171 19 N -0.524 5.524 20 Si 0.756 3.244 21 H -0.199 1.199 22 H -0.209 1.209 23 H -0.197 1.197 24 H 0.113 0.887 25 H 0.079 0.921 26 H 0.090 0.910 27 H 0.157 0.843 28 H 0.147 0.853 29 H 0.147 0.853 30 H 0.154 0.846 31 H 0.084 0.916 32 H 0.089 0.911 33 H 0.043 0.957 34 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -0.302 6.453 -14.369 15.754 hybrid contribution 0.076 -0.056 0.904 0.909 sum -0.225 6.398 -13.465 14.909 Atomic orbital electron populations 1.22560 0.93477 1.04409 1.03680 1.22322 0.95287 0.96470 0.84509 0.89879 1.86344 1.79769 1.36438 1.15380 1.18911 0.93573 0.90362 0.86867 1.21373 1.06770 0.93648 1.00666 1.21019 0.96682 0.99541 0.92079 1.20943 1.02658 0.95009 0.99047 1.20882 0.98584 0.93870 0.95979 1.20240 1.07115 0.88650 0.94176 1.98377 1.87827 1.17723 1.98703 1.19464 0.86816 0.86612 0.83447 1.90573 1.41087 1.27336 1.85601 1.43422 1.44787 1.24091 1.03782 1.21720 0.96131 0.86890 0.98853 1.19623 1.10152 1.28263 0.85236 0.88269 1.25347 0.94908 0.97035 0.99803 1.69962 1.11753 1.43319 1.27339 0.85936 0.78677 0.79583 0.80169 1.19858 1.20888 1.19701 0.88725 0.92051 0.91012 0.84289 0.85338 0.85296 0.84646 0.91586 0.91069 0.95653 0.92098 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -3.02 8.78 37.16 0.33 -2.69 16 2 C 0.07 1.42 1.84 -27.88 -0.05 1.36 16 3 H 0.08 1.39 5.57 -51.93 -0.29 1.10 16 4 O -0.27 -5.35 8.79 -39.42 -0.35 -5.70 16 5 C 0.15 2.47 6.59 -39.19 -0.26 2.21 16 6 C -0.21 -2.71 8.25 -39.44 -0.33 -3.04 16 7 C -0.07 -0.79 10.04 -39.60 -0.40 -1.19 16 8 C -0.16 -1.59 10.04 -39.57 -0.40 -1.99 16 9 C -0.07 -0.87 9.83 -39.57 -0.39 -1.26 16 10 C -0.07 -1.12 6.33 -39.36 -0.25 -1.37 16 11 Cl -0.06 -0.88 28.50 -51.86 -1.48 -2.36 16 12 C 0.45 11.22 7.11 -10.99 -0.08 11.14 16 13 O -0.56 -16.44 16.20 -14.36 -0.23 -16.67 16 14 N -0.44 -11.11 3.02 -122.19 -0.37 -11.48 16 15 C 0.11 2.27 7.04 59.84 0.42 2.69 16 16 C -0.31 -8.43 9.28 -14.93 -0.14 -8.57 16 17 H 0.10 2.88 7.41 -52.49 -0.39 2.50 16 18 C 0.03 0.84 5.14 -17.47 -0.09 0.75 16 19 N -0.88 -22.86 10.59 55.50 0.59 -22.27 16 20 Si 0.93 20.54 29.57 -169.99 -5.03 15.52 16 21 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 22 H -0.28 -6.10 7.11 56.52 0.40 -5.70 16 23 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 24 H 0.09 1.52 4.58 -51.93 -0.24 1.28 16 25 H 0.06 0.82 6.92 -51.93 -0.36 0.46 16 26 H 0.07 1.28 8.14 -51.93 -0.42 0.86 16 27 H 0.14 1.67 5.43 -52.48 -0.29 1.38 16 28 H 0.13 0.98 8.06 -52.48 -0.42 0.56 16 29 H 0.13 0.92 8.06 -52.49 -0.42 0.49 16 30 H 0.14 1.25 8.06 -52.48 -0.42 0.83 16 31 H 0.07 1.43 6.49 -51.93 -0.34 1.09 16 32 H 0.07 1.59 7.13 -51.92 -0.37 1.22 16 33 H 0.02 0.43 5.78 -51.93 -0.30 0.13 16 34 H 0.27 6.61 8.31 -40.82 -0.34 6.27 16 LS Contribution 298.19 15.07 4.49 4.49 Total: -1.00 -31.78 298.19 -7.39 -39.17 By element: Atomic # 1 Polarization: 4.63 SS G_CDS: -3.39 Total: 1.24 kcal Atomic # 6 Polarization: -0.32 SS G_CDS: -1.63 Total: -1.95 kcal Atomic # 7 Polarization: -33.96 SS G_CDS: 0.22 Total: -33.74 kcal Atomic # 8 Polarization: -21.79 SS G_CDS: -0.58 Total: -22.37 kcal Atomic # 14 Polarization: 20.54 SS G_CDS: -5.03 Total: 15.52 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.48 Total: -2.36 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -31.78 -7.39 -39.17 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299539605.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.106 kcal (2) G-P(sol) polarization free energy of solvation -31.782 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.677 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.173 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.068 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds