Wall clock time and date at job start Tue Mar 31 2020 05:38:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35919 * 116.99833 * 2 1 4 4 C 1.38742 * 120.04537 * 0.02562 * 3 2 1 5 5 C 1.38119 * 119.96008 * 179.97438 * 4 3 2 6 6 C 1.38389 * 120.04005 * 359.97438 * 5 4 3 7 7 Cl 1.73598 * 119.95428 * 179.97438 * 6 5 4 8 8 C 1.38336 * 120.08694 * 359.72639 * 6 5 4 9 9 C 1.38170 * 120.04136 * 0.54852 * 8 6 5 10 10 C 1.50703 * 120.02157 * 179.72406 * 9 8 6 11 11 C 1.50701 * 109.47064 * 264.72566 * 10 9 8 12 12 O 1.21280 * 119.99781 * 0.02562 * 11 10 9 13 13 N 1.34780 * 119.99795 * 179.97438 * 11 10 9 14 14 C 1.46497 * 119.99566 * 180.02562 * 13 11 10 15 15 C 1.50703 * 109.46835 * 180.02562 * 14 13 11 16 16 H 1.07995 * 120.00280 * 0.02562 * 15 14 13 17 17 C 1.37880 * 119.99788 * 180.02562 * 15 14 13 18 18 N 1.31511 * 120.00327 * 0.02562 * 17 15 14 19 19 Si 1.86803 * 119.99743 * 179.97438 * 17 15 14 20 20 H 1.48506 * 109.46828 * 90.00241 * 19 17 15 21 21 H 1.48495 * 109.46968 * 209.99597 * 19 17 15 22 22 H 1.48499 * 109.47437 * 330.00066 * 19 17 15 23 23 H 1.09002 * 109.46860 * 300.00103 * 1 2 3 24 24 H 1.09001 * 109.46872 * 59.99845 * 1 2 3 25 25 H 1.08995 * 109.46734 * 179.97438 * 1 2 3 26 26 H 1.08001 * 120.02236 * 0.02562 * 4 3 2 27 27 H 1.08003 * 119.98011 * 180.02562 * 5 4 3 28 28 H 1.08008 * 119.98435 * 180.27520 * 8 6 5 29 29 H 1.09002 * 109.47152 * 144.72659 * 10 9 8 30 30 H 1.09001 * 109.46980 * 24.72759 * 10 9 8 31 31 H 0.96995 * 120.00011 * 0.02562 * 13 11 10 32 32 H 1.09001 * 109.47487 * 300.00114 * 14 13 11 33 33 H 1.09002 * 109.47182 * 60.00342 * 14 13 11 34 34 H 0.97000 * 120.00354 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0461 1.2111 0.0000 4 6 1.2913 2.3752 0.0005 5 6 1.9202 3.6050 0.0011 6 6 3.3022 3.6763 0.0016 7 17 4.0903 5.2231 0.0016 8 6 4.0565 2.5167 0.0073 9 6 3.4311 1.2847 0.0011 10 6 4.2534 0.0217 0.0010 11 6 4.4241 -0.4664 -1.4145 12 8 3.9275 0.1508 -2.3328 13 7 5.1296 -1.5883 -1.6599 14 6 5.2961 -2.0625 -3.0360 15 6 6.1182 -3.3255 -3.0360 16 1 6.4801 -3.7344 -2.1042 17 6 6.4083 -3.9592 -4.2257 18 7 5.9681 -3.4611 -5.3605 19 14 7.4279 -5.5244 -4.2258 20 1 6.5293 -6.7005 -4.1054 21 1 8.1949 -5.6154 -5.4941 22 1 8.3700 -5.5016 -3.0781 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3632 -1.0276 -0.0005 26 1 0.2128 2.3200 0.0014 27 1 1.3330 4.5114 0.0019 28 1 5.1351 2.5744 0.0122 29 1 3.7459 -0.7422 0.5901 30 1 5.2320 0.2253 0.4357 31 1 5.5271 -2.0817 -0.9254 32 1 4.3176 -2.2663 -3.4710 33 1 5.8034 -1.2983 -3.6248 34 1 6.1719 -3.9071 -6.1974 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000340902825.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:38:57 Heat of formation + Delta-G solvation = -66.652819 kcal Electronic energy + Delta-G solvation = -19318.900094 eV Core-core repulsion = 16049.666915 eV Total energy + Delta-G solvation = -3269.233179 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.45407 -38.56923 -37.67144 -36.21436 -34.14408 -32.85287 -32.24057 -30.07085 -28.46816 -27.34297 -26.42627 -22.90203 -22.29511 -21.60096 -19.61966 -18.13393 -17.07582 -16.62924 -16.25080 -15.87566 -15.44096 -15.07634 -14.62407 -14.56605 -14.12697 -13.90675 -13.40779 -13.10623 -12.71486 -12.53663 -12.24435 -11.96668 -11.90768 -11.85250 -11.34802 -11.23035 -10.97005 -10.85299 -10.76260 -10.72371 -10.28994 -9.36964 -9.23192 -8.83074 -8.70794 -8.08649 -7.82590 -6.14367 -4.21146 1.15580 1.20287 2.13401 3.20388 3.25468 3.31501 3.34023 3.46081 3.50831 4.22700 4.43345 4.58572 4.65084 4.91270 5.04466 5.05867 5.14170 5.21647 5.37914 5.38722 5.46757 5.61670 5.68151 5.88516 6.05636 6.10924 6.24735 6.54075 7.26712 7.35389 7.49524 7.55926 7.70146 8.00076 8.67940 8.81700 9.16866 9.45685 10.95890 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.022297 B = 0.003653 C = 0.003310 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1255.453299 B = 7663.779617 C = 8456.021623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.306 6.306 3 C 0.150 3.850 4 C -0.199 4.199 5 C -0.074 4.074 6 C -0.071 4.071 7 Cl -0.078 7.078 8 C -0.061 4.061 9 C -0.074 4.074 10 C -0.098 4.098 11 C 0.503 3.497 12 O -0.549 6.549 13 N -0.714 5.714 14 C 0.250 3.750 15 C -0.542 4.542 16 H 0.063 0.937 17 C 0.063 3.937 18 N -0.886 5.886 19 Si 0.903 3.097 20 H -0.279 1.279 21 H -0.285 1.285 22 H -0.272 1.272 23 H 0.054 0.946 24 H 0.057 0.943 25 H 0.101 0.899 26 H 0.136 0.864 27 H 0.133 0.867 28 H 0.139 0.861 29 H 0.103 0.897 30 H 0.099 0.901 31 H 0.390 0.610 32 H 0.025 0.975 33 H 0.026 0.974 34 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.906 11.520 15.096 20.974 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.218 6.218 3 C 0.104 3.896 4 C -0.218 4.218 5 C -0.093 4.093 6 C -0.097 4.097 7 Cl -0.049 7.049 8 C -0.080 4.080 9 C -0.075 4.075 10 C -0.138 4.138 11 C 0.288 3.712 12 O -0.428 6.428 13 N -0.363 5.363 14 C 0.130 3.870 15 C -0.581 4.581 16 H 0.081 0.919 17 C -0.140 4.140 18 N -0.523 5.523 19 Si 0.731 3.269 20 H -0.205 1.205 21 H -0.210 1.210 22 H -0.197 1.197 23 H 0.073 0.927 24 H 0.075 0.925 25 H 0.119 0.881 26 H 0.153 0.847 27 H 0.151 0.849 28 H 0.156 0.844 29 H 0.122 0.878 30 H 0.117 0.883 31 H 0.223 0.777 32 H 0.043 0.957 33 H 0.044 0.956 34 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -9.103 11.848 14.193 20.607 hybrid contribution 0.513 -0.815 0.129 0.972 sum -8.590 11.033 14.322 20.016 Atomic orbital electron populations 1.23091 0.78339 1.04218 1.01178 1.86136 1.21367 1.26351 1.87954 1.18832 0.91705 0.84484 0.94589 1.21092 1.00169 0.91510 1.08982 1.20728 0.92311 0.97876 0.98402 1.20636 0.92743 0.86408 1.09932 1.98348 1.80800 1.28504 1.97277 1.20728 1.00284 0.89475 0.97469 1.18620 0.90376 0.94494 1.04028 1.20567 1.00723 0.95470 0.97071 1.20240 0.79389 0.81591 0.90015 1.90667 1.48983 1.56950 1.46210 1.46427 1.52464 1.25265 1.12095 1.19080 0.97061 0.94194 0.76693 1.21241 1.34298 1.09073 0.93466 0.91885 1.24954 0.95933 0.97921 0.95222 1.69977 1.44832 1.39666 0.97872 0.86422 0.80051 0.82851 0.77620 1.20486 1.21026 1.19727 0.92741 0.92461 0.88058 0.84673 0.84945 0.84358 0.87850 0.88303 0.77741 0.95657 0.95616 0.92482 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.25 9.81 101.05 0.99 1.24 16 2 O -0.31 -4.30 9.63 -19.49 -0.19 -4.49 16 3 C 0.15 2.14 6.66 -39.22 -0.26 1.88 16 4 C -0.20 -2.36 9.04 -39.44 -0.36 -2.72 16 5 C -0.07 -0.86 9.82 -39.57 -0.39 -1.25 16 6 C -0.07 -0.91 6.32 -39.49 -0.25 -1.16 16 7 Cl -0.08 -0.91 28.95 -51.86 -1.50 -2.41 16 8 C -0.06 -0.84 9.46 -39.57 -0.37 -1.21 16 9 C -0.07 -1.10 4.39 -104.48 -0.46 -1.55 16 10 C -0.10 -1.44 5.55 -29.03 -0.16 -1.60 16 11 C 0.50 10.24 7.82 -10.98 -0.09 10.16 16 12 O -0.55 -13.60 16.03 5.56 0.09 -13.51 16 13 N -0.71 -15.23 5.55 -61.47 -0.34 -15.57 16 14 C 0.25 6.74 5.43 -5.19 -0.03 6.71 16 15 C -0.54 -14.84 9.28 -34.44 -0.32 -15.16 16 16 H 0.06 1.61 7.60 -52.49 -0.40 1.21 16 17 C 0.06 1.77 5.46 -17.82 -0.10 1.67 16 18 N -0.89 -26.34 13.29 55.43 0.74 -25.61 16 19 Si 0.90 20.93 29.54 -169.99 -5.02 15.91 16 20 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 21 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 22 H -0.27 -6.12 7.11 56.52 0.40 -5.71 16 23 H 0.05 0.39 7.66 -51.93 -0.40 -0.01 16 24 H 0.06 0.52 7.66 -51.93 -0.40 0.12 16 25 H 0.10 0.80 8.14 -51.93 -0.42 0.38 16 26 H 0.14 1.22 6.30 -52.49 -0.33 0.89 16 27 H 0.13 1.21 8.06 -52.48 -0.42 0.78 16 28 H 0.14 1.70 8.06 -52.48 -0.42 1.28 16 29 H 0.10 1.35 7.69 -51.93 -0.40 0.95 16 30 H 0.10 1.16 8.05 -51.93 -0.42 0.74 16 31 H 0.39 7.05 8.32 -40.82 -0.34 6.71 16 32 H 0.03 0.76 8.14 -51.93 -0.42 0.33 16 33 H 0.03 0.77 8.14 -51.93 -0.42 0.34 16 34 H 0.27 7.39 8.31 -40.82 -0.34 7.05 16 LS Contribution 315.48 15.07 4.75 4.75 Total: -1.00 -33.78 315.48 -7.19 -40.97 By element: Atomic # 1 Polarization: 6.86 SS G_CDS: -3.93 Total: 2.93 kcal Atomic # 6 Polarization: -1.19 SS G_CDS: -1.79 Total: -2.98 kcal Atomic # 7 Polarization: -41.57 SS G_CDS: 0.40 Total: -41.18 kcal Atomic # 8 Polarization: -17.90 SS G_CDS: -0.10 Total: -18.00 kcal Atomic # 14 Polarization: 20.93 SS G_CDS: -5.02 Total: 15.91 kcal Atomic # 17 Polarization: -0.91 SS G_CDS: -1.50 Total: -2.41 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -33.78 -7.19 -40.97 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000340902825.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.679 kcal (2) G-P(sol) polarization free energy of solvation -33.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.462 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.191 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.974 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.653 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds