Wall clock time and date at job start Tue Mar 31 2020 05:36:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35658 * 117.00198 * 2 1 4 4 C 1.38677 * 120.14023 * 0.22940 * 3 2 1 5 5 C 1.38095 * 120.12041 * 180.29969 * 4 3 2 6 6 C 1.38483 * 120.41317 * 359.72395 * 5 4 3 7 7 C 1.37971 * 120.28131 * 0.02562 * 6 5 4 8 8 Cl 1.73601 * 120.06127 * 179.97438 * 7 6 5 9 9 C 1.39838 * 119.87483 * 359.97438 * 7 6 5 10 10 C 1.47456 * 120.20381 * 180.02562 * 9 7 6 11 11 O 1.21601 * 119.99986 * 90.00184 * 10 9 7 12 12 N 1.34777 * 119.99987 * 269.99878 * 10 9 7 13 13 C 1.46498 * 119.99828 * 0.27959 * 12 10 9 14 14 C 1.46506 * 119.99873 * 179.97438 * 12 10 9 15 15 C 1.50703 * 109.46877 * 90.00288 * 14 12 10 16 16 H 1.08005 * 119.99817 * 0.02562 * 15 14 12 17 17 C 1.37871 * 120.00081 * 179.97438 * 15 14 12 18 18 N 1.31520 * 119.99848 * 0.02562 * 17 15 14 19 19 Si 1.86798 * 120.00321 * 179.97438 * 17 15 14 20 20 H 1.48504 * 109.46844 * 60.00490 * 19 17 15 21 21 H 1.48496 * 109.47153 * 180.02562 * 19 17 15 22 22 H 1.48499 * 109.47045 * 300.00555 * 19 17 15 23 23 H 1.09004 * 109.47573 * 300.00243 * 1 2 3 24 24 H 1.09005 * 109.47091 * 59.99795 * 1 2 3 25 25 H 1.09002 * 109.47322 * 179.97438 * 1 2 3 26 26 H 1.07999 * 119.94108 * 0.02562 * 4 3 2 27 27 H 1.08001 * 119.79570 * 179.70298 * 5 4 3 28 28 H 1.07991 * 119.85793 * 180.02562 * 6 5 4 29 29 H 1.08998 * 109.46661 * 269.71691 * 13 12 10 30 30 H 1.08993 * 109.47575 * 29.72405 * 13 12 10 31 31 H 1.09001 * 109.46870 * 149.72361 * 13 12 10 32 32 H 1.09000 * 109.46803 * 209.99767 * 14 12 10 33 33 H 1.09000 * 109.47214 * 330.00561 * 14 12 10 34 34 H 0.96998 * 119.99944 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2925 2.3736 0.0048 5 6 1.9199 3.6038 -0.0014 6 6 3.3022 3.6858 -0.0068 7 6 4.0672 2.5375 -0.0064 8 17 5.7998 2.6469 -0.0138 9 6 3.4444 1.2856 -0.0001 10 6 4.2549 0.0538 0.0008 11 8 4.5929 -0.4508 1.0543 12 7 4.6210 -0.5129 -1.1659 13 6 4.2189 0.0983 -2.4351 14 6 5.4268 -1.7365 -1.1649 15 6 4.5164 -2.9375 -1.1574 16 1 3.4448 -2.8027 -1.1542 17 6 5.0515 -4.2081 -1.1558 18 7 6.3564 -4.3721 -1.1602 19 14 3.9231 -5.6968 -1.1458 20 1 3.0607 -5.6723 -2.3545 21 1 4.7398 -6.9369 -1.1449 22 1 3.0717 -5.6643 0.0705 23 1 -0.3634 0.5139 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3634 -1.0277 -0.0005 26 1 0.2139 2.3187 0.0090 27 1 1.3287 4.5077 -0.0025 28 1 3.7835 4.6525 -0.0112 29 1 3.2607 -0.3151 -2.7498 30 1 4.1246 1.1764 -2.3054 31 1 4.9722 -0.1118 -3.1943 32 1 6.0523 -1.7603 -2.0573 33 1 6.0591 -1.7544 -0.2772 34 1 6.7328 -5.2661 -1.1586 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000360100394.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:36:35 Heat of formation + Delta-G solvation = -44.832784 kcal Electronic energy + Delta-G solvation = -20349.692870 eV Core-core repulsion = 17081.405878 eV Total energy + Delta-G solvation = -3268.286992 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.46973 -38.49470 -37.48838 -36.21383 -34.67930 -32.58114 -31.25277 -30.15398 -27.79978 -27.31912 -25.78324 -24.01150 -22.25163 -22.19590 -19.26702 -17.97842 -16.69930 -16.58181 -16.29005 -15.88049 -15.34815 -15.22612 -14.77823 -14.32234 -14.12885 -13.65986 -13.24844 -12.90215 -12.35442 -12.27068 -12.02930 -11.90031 -11.78441 -11.76506 -11.34829 -11.15350 -10.93664 -10.91048 -10.84095 -10.51194 -10.09263 -9.56335 -9.08267 -8.77571 -8.36906 -8.30383 -7.55805 -5.96676 -4.00348 0.92914 1.19221 2.04602 3.26285 3.35766 3.37802 3.40529 3.42790 3.45666 3.99948 4.50023 4.61590 4.82942 4.97098 5.02598 5.08573 5.18279 5.19058 5.37056 5.44709 5.54991 5.74239 5.98762 6.00189 6.09873 6.14432 6.27972 6.38113 7.10575 7.28453 7.51227 7.61746 8.00160 8.31851 8.45484 8.96795 9.13357 9.63674 11.11628 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.019147 B = 0.006202 C = 0.005030 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1462.014593 B = 4513.733249 C = 5564.758139 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.294 6.294 3 C 0.171 3.829 4 C -0.210 4.210 5 C -0.062 4.062 6 C -0.153 4.153 7 C 0.025 3.975 8 Cl -0.047 7.047 9 C -0.135 4.135 10 C 0.563 3.437 11 O -0.526 6.526 12 N -0.587 5.587 13 C 0.089 3.911 14 C 0.247 3.753 15 C -0.522 4.522 16 H 0.058 0.942 17 C 0.060 3.940 18 N -0.897 5.897 19 Si 0.898 3.102 20 H -0.278 1.278 21 H -0.287 1.287 22 H -0.277 1.277 23 H 0.056 0.944 24 H 0.057 0.943 25 H 0.104 0.896 26 H 0.137 0.863 27 H 0.135 0.865 28 H 0.137 0.863 29 H 0.049 0.951 30 H 0.051 0.949 31 H 0.069 0.931 32 H 0.034 0.966 33 H 0.044 0.956 34 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.862 17.308 -1.305 20.476 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.206 6.206 3 C 0.123 3.877 4 C -0.229 4.229 5 C -0.080 4.080 6 C -0.172 4.172 7 C -0.003 4.003 8 Cl -0.018 7.018 9 C -0.140 4.140 10 C 0.348 3.652 11 O -0.403 6.403 12 N -0.318 5.318 13 C -0.055 4.055 14 C 0.128 3.872 15 C -0.561 4.561 16 H 0.077 0.923 17 C -0.141 4.141 18 N -0.536 5.536 19 Si 0.726 3.274 20 H -0.203 1.203 21 H -0.212 1.212 22 H -0.202 1.202 23 H 0.075 0.925 24 H 0.075 0.925 25 H 0.122 0.878 26 H 0.155 0.845 27 H 0.153 0.847 28 H 0.155 0.845 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.088 0.912 32 H 0.052 0.948 33 H 0.062 0.938 34 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -10.272 16.656 -0.773 19.584 hybrid contribution -0.785 -0.709 -0.091 1.062 sum -11.057 15.946 -0.864 19.424 Atomic orbital electron populations 1.23149 0.78018 1.04579 1.01090 1.86250 1.21492 1.25619 1.87231 1.18802 0.90275 0.85094 0.93508 1.21257 1.00409 0.91903 1.09331 1.20901 0.93629 0.97264 0.96235 1.20847 0.93611 0.97128 1.05654 1.20630 0.85660 0.92839 1.01127 1.98405 1.08597 1.98330 1.96450 1.19376 0.91572 0.94448 1.08604 1.17553 0.80052 0.82818 0.84810 1.90779 1.55247 1.63334 1.30907 1.48015 1.52398 1.27323 1.04058 1.21572 1.00547 0.96445 0.86962 1.19334 0.90338 0.79031 0.98494 1.21415 0.93431 0.90589 1.50636 0.92334 1.24925 0.95103 0.98885 0.95233 1.69929 1.10256 1.22693 1.50728 0.86563 0.80558 0.81755 0.78557 1.20319 1.21226 1.20212 0.92522 0.92470 0.87777 0.84545 0.84683 0.84473 0.93271 0.93032 0.91220 0.94822 0.93759 0.92749 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.29 9.81 101.05 0.99 1.28 16 2 O -0.29 -5.00 9.94 -18.67 -0.19 -5.19 16 3 C 0.17 2.73 6.70 -38.70 -0.26 2.47 16 4 C -0.21 -2.40 9.03 -39.47 -0.36 -2.76 16 5 C -0.06 -0.61 10.03 -39.54 -0.40 -1.01 16 6 C -0.15 -1.77 9.81 -39.59 -0.39 -2.16 16 7 C 0.03 0.39 5.91 -39.08 -0.23 0.16 16 8 Cl -0.05 -0.75 28.04 -51.86 -1.45 -2.20 16 9 C -0.14 -2.49 3.93 -104.82 -0.41 -2.90 16 10 C 0.56 13.14 5.70 -12.51 -0.07 13.07 16 11 O -0.53 -14.64 16.69 5.28 0.09 -14.55 16 12 N -0.59 -13.60 2.86 -184.22 -0.53 -14.13 16 13 C 0.09 1.61 10.30 59.85 0.62 2.23 16 14 C 0.25 6.79 5.21 -5.19 -0.03 6.76 16 15 C -0.52 -15.38 9.39 -34.44 -0.32 -15.70 16 16 H 0.06 1.73 7.81 -52.48 -0.41 1.32 16 17 C 0.06 1.77 5.46 -17.82 -0.10 1.67 16 18 N -0.90 -27.31 13.29 55.43 0.74 -26.57 16 19 Si 0.90 22.41 29.54 -169.99 -5.02 17.39 16 20 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 21 H -0.29 -7.01 7.11 56.52 0.40 -6.61 16 22 H -0.28 -6.93 7.11 56.52 0.40 -6.53 16 23 H 0.06 0.50 7.65 -51.93 -0.40 0.10 16 24 H 0.06 0.48 7.67 -51.93 -0.40 0.08 16 25 H 0.10 1.03 8.14 -51.93 -0.42 0.60 16 26 H 0.14 1.14 6.30 -52.49 -0.33 0.81 16 27 H 0.14 0.85 8.06 -52.49 -0.42 0.42 16 28 H 0.14 1.22 8.06 -52.49 -0.42 0.80 16 29 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 30 H 0.05 0.81 6.53 -51.93 -0.34 0.47 16 31 H 0.07 1.17 7.89 -51.93 -0.41 0.76 16 32 H 0.03 0.92 7.89 -51.93 -0.41 0.51 16 33 H 0.04 1.36 7.42 -51.93 -0.39 0.98 16 34 H 0.26 7.56 8.31 -40.82 -0.34 7.22 16 LS Contribution 312.81 15.07 4.71 4.71 Total: -1.00 -35.82 312.81 -6.51 -42.33 By element: Atomic # 1 Polarization: -0.99 SS G_CDS: -3.91 Total: -4.90 kcal Atomic # 6 Polarization: 4.05 SS G_CDS: -0.95 Total: 3.10 kcal Atomic # 7 Polarization: -40.91 SS G_CDS: 0.21 Total: -40.70 kcal Atomic # 8 Polarization: -19.64 SS G_CDS: -0.10 Total: -19.74 kcal Atomic # 14 Polarization: 22.41 SS G_CDS: -5.02 Total: 17.39 kcal Atomic # 17 Polarization: -0.75 SS G_CDS: -1.45 Total: -2.20 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -35.82 -6.51 -42.33 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000360100394.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.500 kcal (2) G-P(sol) polarization free energy of solvation -35.824 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.324 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.332 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.833 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds