Wall clock time and date at job start Tue Mar 31 2020 05:29:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 N 1.46501 * 109.47314 * 2 1 4 4 C 1.46501 * 119.99800 * 274.15650 * 3 2 1 5 5 C 1.50702 * 109.47331 * 269.72851 * 4 3 2 6 6 H 1.08003 * 119.99484 * 359.97438 * 5 4 3 7 7 C 1.37880 * 120.00234 * 180.02562 * 5 4 3 8 8 N 1.31515 * 119.99574 * 359.97438 * 7 5 4 9 9 Si 1.86790 * 119.99962 * 179.97438 * 7 5 4 10 10 H 1.48497 * 109.47331 * 359.97438 * 9 7 5 11 11 H 1.48501 * 109.47044 * 119.99804 * 9 7 5 12 12 H 1.48502 * 109.47026 * 239.99618 * 9 7 5 13 13 C 1.34776 * 120.00000 * 93.88255 * 3 2 1 14 14 O 1.21601 * 119.99383 * 174.74791 * 13 3 2 15 15 C 1.47459 * 120.00489 * 354.74781 * 13 3 2 16 16 C 1.40203 * 120.20204 * 85.35755 * 15 13 3 17 17 O 1.35661 * 120.14163 * 359.97438 * 16 15 13 18 18 C 1.38625 * 119.71517 * 180.02562 * 16 15 13 19 19 C 1.38142 * 120.11900 * 0.02562 * 18 16 15 20 20 C 1.38430 * 120.41564 * 359.97423 * 19 18 16 21 21 C 1.38013 * 120.28414 * 359.76372 * 20 19 18 22 22 Cl 1.73594 * 120.06851 * 180.28511 * 21 20 19 23 23 H 1.08995 * 109.47556 * 174.49226 * 1 2 3 24 24 H 1.09003 * 109.47353 * 294.49168 * 1 2 3 25 25 H 1.09005 * 109.47101 * 54.49005 * 1 2 3 26 26 H 1.09000 * 109.47062 * 239.99587 * 2 1 3 27 27 H 1.09005 * 109.46899 * 119.99970 * 2 1 3 28 28 H 1.09005 * 109.46815 * 29.72516 * 4 3 2 29 29 H 1.08994 * 109.47422 * 149.72342 * 4 3 2 30 30 H 0.97000 * 120.00023 * 179.97438 * 8 7 5 31 31 H 0.96697 * 114.00004 * 93.73909 * 17 16 15 32 32 H 1.08000 * 119.93893 * 180.02562 * 18 16 15 33 33 H 1.08004 * 119.79097 * 179.97438 * 19 18 16 34 34 H 1.07998 * 119.86044 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.1758 2.1024 -1.2654 5 6 3.5679 1.8828 -1.7990 6 1 4.2658 1.2678 -1.2501 7 6 3.9511 2.4677 -2.9873 8 7 3.1014 3.2170 -3.6553 9 14 5.6769 2.1960 -3.6482 10 1 6.4320 1.3211 -2.7158 11 1 5.5998 1.5485 -4.9824 12 1 6.3712 3.5029 -3.7717 13 6 2.3174 1.9902 1.1645 14 8 2.8124 3.1009 1.1601 15 6 2.0446 1.3097 2.4439 16 6 2.9814 0.4153 2.9808 17 8 4.1438 0.1713 2.3252 18 6 2.7144 -0.2193 4.1840 19 6 1.5299 0.0284 4.8504 20 6 0.6014 0.9104 4.3250 21 6 0.8522 1.5556 3.1310 22 17 -0.3129 2.6662 2.4809 23 1 -0.3634 -1.0228 -0.0986 24 1 -0.3634 0.4260 0.9352 25 1 -0.3633 0.5969 -0.8366 26 1 1.8932 -0.5139 -0.8900 27 1 1.8932 -0.5139 0.8900 28 1 1.4475 1.7328 -1.9873 29 1 2.0142 3.1674 -1.0992 30 1 3.3711 3.6289 -4.4911 31 1 4.8810 0.7277 2.6114 32 1 3.4336 -0.9085 4.6011 33 1 1.3271 -0.4693 5.7873 34 1 -0.3215 1.0977 4.8537 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000764516489.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:29:03 Heat of formation + Delta-G solvation = -57.365691 kcal Electronic energy + Delta-G solvation = -20514.065174 eV Core-core repulsion = 17245.234715 eV Total energy + Delta-G solvation = -3268.830459 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.076 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.30047 -38.22886 -37.09237 -36.07047 -35.22215 -32.76874 -31.10947 -30.00894 -29.93621 -27.09254 -24.10706 -23.06189 -22.62095 -22.07767 -19.15363 -18.26062 -16.95275 -16.46144 -16.12766 -15.79974 -15.66213 -14.88342 -14.44049 -14.22434 -13.74466 -13.48363 -13.11369 -13.05530 -12.66290 -12.25720 -11.96307 -11.95180 -11.54119 -11.38402 -11.18255 -10.97335 -10.84820 -10.73226 -10.62624 -10.51441 -10.08797 -9.56609 -9.15354 -8.80950 -8.74293 -8.39115 -7.62460 -5.99753 -4.03472 0.90441 0.95803 2.07843 3.23300 3.32690 3.33195 3.40365 3.45439 3.89620 4.14277 4.48380 4.67617 4.83457 4.99502 5.10400 5.34268 5.39944 5.46092 5.53728 5.73907 5.84805 5.98039 6.05337 6.12780 6.17233 6.32743 6.41729 6.60569 7.09222 7.46595 7.57454 7.60031 7.97037 8.28334 8.41700 8.91714 9.07634 9.60937 11.08587 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.021664 B = 0.005954 C = 0.005326 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1292.147983 B = 4701.632058 C = 5256.391151 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C 0.108 3.892 3 N -0.578 5.578 4 C 0.247 3.753 5 C -0.521 4.521 6 H 0.060 0.940 7 C 0.060 3.940 8 N -0.896 5.896 9 Si 0.898 3.102 10 H -0.273 1.273 11 H -0.284 1.284 12 H -0.283 1.283 13 C 0.558 3.442 14 O -0.529 6.529 15 C -0.124 4.124 16 C 0.147 3.853 17 O -0.484 6.484 18 C -0.147 4.147 19 C -0.087 4.087 20 C -0.125 4.125 21 C 0.005 3.995 22 Cl -0.049 7.049 23 H 0.058 0.942 24 H 0.051 0.949 25 H 0.062 0.938 26 H 0.082 0.918 27 H 0.065 0.935 28 H 0.034 0.966 29 H 0.042 0.958 30 H 0.262 0.738 31 H 0.399 0.601 32 H 0.138 0.862 33 H 0.137 0.863 34 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.442 -8.638 16.610 19.497 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.016 4.016 3 N -0.308 5.308 4 C 0.129 3.871 5 C -0.560 4.560 6 H 0.078 0.922 7 C -0.142 4.142 8 N -0.536 5.536 9 Si 0.726 3.274 10 H -0.198 1.198 11 H -0.210 1.210 12 H -0.210 1.210 13 C 0.342 3.658 14 O -0.406 6.406 15 C -0.129 4.129 16 C 0.101 3.899 17 O -0.295 6.295 18 C -0.166 4.166 19 C -0.105 4.105 20 C -0.143 4.143 21 C -0.023 4.023 22 Cl -0.020 7.020 23 H 0.077 0.923 24 H 0.070 0.930 25 H 0.081 0.919 26 H 0.100 0.900 27 H 0.083 0.917 28 H 0.052 0.948 29 H 0.060 0.940 30 H 0.072 0.928 31 H 0.257 0.743 32 H 0.155 0.845 33 H 0.155 0.845 34 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -5.621 -8.251 16.022 18.878 hybrid contribution 1.102 0.247 -0.288 1.165 sum -4.519 -8.004 15.734 18.222 Atomic orbital electron populations 1.22242 0.96749 1.01488 1.02401 1.21403 0.93514 0.83984 1.02675 1.48127 1.62134 1.13157 1.07360 1.19310 0.96967 0.92905 0.77958 1.21482 0.98041 1.30583 1.05855 0.92181 1.24935 0.97558 0.95005 0.96698 1.69947 1.34966 1.32634 1.16023 0.86442 0.84447 0.77967 0.78566 1.19772 1.21028 1.20955 1.17660 0.79510 0.85641 0.82958 1.90799 1.43367 1.19658 1.86767 1.20592 0.95070 0.98584 0.98635 1.18326 0.87842 0.93167 0.90551 1.84774 1.18364 1.62849 1.63509 1.21483 0.99062 1.01695 0.94351 1.21008 0.92818 0.97005 0.99709 1.20984 1.00940 0.97812 0.94607 1.20773 0.90843 0.95500 0.95179 1.98407 1.57077 1.60632 1.85837 0.92278 0.92968 0.91919 0.90000 0.91696 0.94786 0.93981 0.92848 0.74336 0.84455 0.84527 0.84406 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.64 10.24 37.15 0.38 -2.26 16 2 C 0.11 1.97 5.95 -4.05 -0.02 1.95 16 3 N -0.58 -12.95 2.46 -176.32 -0.43 -13.38 16 4 C 0.25 6.65 5.14 -5.19 -0.03 6.63 16 5 C -0.52 -15.08 9.39 -34.44 -0.32 -15.41 16 6 H 0.06 1.76 7.81 -52.48 -0.41 1.35 16 7 C 0.06 1.73 5.46 -17.82 -0.10 1.63 16 8 N -0.90 -27.02 13.29 55.43 0.74 -26.29 16 9 Si 0.90 22.23 29.54 -169.99 -5.02 17.21 16 10 H -0.27 -6.67 7.11 56.52 0.40 -6.27 16 11 H -0.28 -6.85 7.11 56.52 0.40 -6.45 16 12 H -0.28 -7.00 7.11 56.52 0.40 -6.60 16 13 C 0.56 12.34 5.68 -12.50 -0.07 12.27 16 14 O -0.53 -13.93 16.74 5.28 0.09 -13.84 16 15 C -0.12 -2.14 4.16 -104.82 -0.44 -2.58 16 16 C 0.15 2.14 5.79 -38.70 -0.22 1.92 16 17 O -0.48 -7.22 12.95 -18.68 -0.24 -7.46 16 18 C -0.15 -1.58 9.97 -39.47 -0.39 -1.98 16 19 C -0.09 -0.81 10.03 -39.55 -0.40 -1.21 16 20 C -0.12 -1.37 9.81 -39.59 -0.39 -1.76 16 21 C 0.00 0.07 5.79 -39.08 -0.23 -0.16 16 22 Cl -0.05 -0.76 27.10 -51.86 -1.41 -2.17 16 23 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 24 H 0.05 0.79 6.58 -51.93 -0.34 0.45 16 25 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 26 H 0.08 1.52 8.10 -51.93 -0.42 1.10 16 27 H 0.06 1.10 6.14 -51.93 -0.32 0.78 16 28 H 0.03 0.92 8.07 -51.93 -0.42 0.50 16 29 H 0.04 1.27 7.50 -51.93 -0.39 0.88 16 30 H 0.26 7.43 8.31 -40.82 -0.34 7.09 16 31 H 0.40 4.45 9.06 45.56 0.41 4.86 16 32 H 0.14 1.12 8.06 -52.49 -0.42 0.70 16 33 H 0.14 0.80 8.06 -52.48 -0.42 0.38 16 34 H 0.14 1.17 8.06 -52.49 -0.42 0.74 16 LS Contribution 312.83 15.07 4.71 4.71 Total: -1.00 -34.77 312.83 -6.92 -41.70 By element: Atomic # 1 Polarization: 3.60 SS G_CDS: -3.14 Total: 0.47 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -2.23 Total: -0.94 kcal Atomic # 7 Polarization: -39.97 SS G_CDS: 0.30 Total: -39.67 kcal Atomic # 8 Polarization: -21.15 SS G_CDS: -0.15 Total: -21.30 kcal Atomic # 14 Polarization: 22.23 SS G_CDS: -5.02 Total: 17.21 kcal Atomic # 17 Polarization: -0.76 SS G_CDS: -1.41 Total: -2.17 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -34.77 -6.92 -41.70 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000764516489.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.670 kcal (2) G-P(sol) polarization free energy of solvation -34.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.695 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.366 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds