Wall clock time and date at job start Tue Mar 31 2020 06:11:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38134 * 120.47185 * 2 1 4 4 Cl 1.73597 * 119.59617 * 359.97438 * 3 2 1 5 5 N 1.32046 * 120.80558 * 179.97438 * 3 2 1 6 6 C 1.32014 * 121.87608 * 0.02562 * 5 3 2 7 7 C 1.37886 * 120.85301 * 359.74726 * 6 5 3 8 8 C 1.39318 * 120.46730 * 179.97438 * 2 1 3 9 9 N 1.39548 * 120.85017 * 359.97438 * 8 2 1 10 10 C 1.34778 * 119.99930 * 146.19756 * 9 8 2 11 11 O 1.21588 * 119.99680 * 4.20839 * 10 9 8 12 12 N 1.34774 * 120.00227 * 184.21190 * 10 9 8 13 13 C 1.46496 * 120.00207 * 179.97438 * 12 10 9 14 14 C 1.53004 * 109.47148 * 180.02562 * 13 12 10 15 15 C 1.50703 * 109.46955 * 180.02562 * 14 13 12 16 16 H 1.07997 * 120.00133 * 359.97438 * 15 14 13 17 17 C 1.37872 * 119.99556 * 179.97438 * 15 14 13 18 18 N 1.31516 * 119.99807 * 179.97438 * 17 15 14 19 19 Si 1.86807 * 120.00472 * 0.02562 * 17 15 14 20 20 H 1.48501 * 109.47068 * 89.99744 * 19 17 15 21 21 H 1.48499 * 109.47057 * 209.99678 * 19 17 15 22 22 H 1.48498 * 109.46756 * 329.99933 * 19 17 15 23 23 H 1.08995 * 109.47137 * 270.02116 * 1 2 3 24 24 H 1.09001 * 109.47208 * 30.01727 * 1 2 3 25 25 H 1.08999 * 109.47369 * 150.02068 * 1 2 3 26 26 H 1.07995 * 119.57180 * 180.02562 * 6 5 3 27 27 H 1.07996 * 120.44876 * 180.28878 * 7 6 5 28 28 H 0.96999 * 119.99846 * 326.19490 * 9 8 2 29 29 H 0.97002 * 119.99598 * 0.02562 * 12 10 9 30 30 H 1.09007 * 109.47209 * 299.99670 * 13 12 10 31 31 H 1.08993 * 109.47038 * 59.99512 * 13 12 10 32 32 H 1.08999 * 109.46928 * 300.00136 * 14 13 12 33 33 H 1.09000 * 109.46975 * 60.00025 * 14 13 12 34 34 H 0.97004 * 120.00077 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2075 1.1905 0.0000 4 17 1.3413 2.6950 -0.0007 5 7 3.5279 1.1982 0.0005 6 6 4.2316 0.0813 0.0005 7 6 3.6069 -1.1480 0.0052 8 6 2.2134 -1.2008 0.0005 9 7 1.5436 -2.4251 0.0016 10 6 2.0708 -3.4822 -0.6472 11 8 3.1655 -3.3913 -1.1685 12 7 1.3846 -4.6400 -0.7183 13 6 1.9574 -5.7888 -1.4241 14 6 0.9828 -6.9664 -1.3570 15 6 1.5724 -8.1484 -2.0824 16 1 2.5447 -8.0677 -2.5454 17 6 0.8703 -9.3328 -2.1550 18 7 1.3846 -10.3642 -2.7886 19 14 -0.8119 -9.4722 -1.3548 20 1 -1.8589 -9.0797 -2.3320 21 1 -1.0394 -10.8743 -0.9218 22 1 -0.8745 -8.5732 -0.1745 23 1 -0.3633 0.0004 1.0276 24 1 -0.3634 0.8898 -0.5141 25 1 -0.3634 -0.8901 -0.5135 26 1 5.3104 0.1310 0.0014 27 1 4.1890 -2.0577 0.0099 28 1 0.6986 -2.5152 0.4694 29 1 0.5111 -4.7123 -0.3028 30 1 2.1348 -5.5235 -2.4664 31 1 2.9004 -6.0699 -0.9553 32 1 0.8050 -7.2318 -0.3148 33 1 0.0401 -6.6849 -1.8261 34 1 0.8905 -11.1974 -2.8400 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000810296891.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:11:15 Heat of formation + Delta-G solvation = -6.339735 kcal Electronic energy + Delta-G solvation = -19025.307803 eV Core-core repulsion = 15790.982746 eV Total energy + Delta-G solvation = -3234.325057 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.083 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -41.18491 -39.59363 -36.92122 -35.92132 -35.07076 -33.12255 -32.86004 -31.21895 -29.87211 -27.55686 -25.30353 -23.64652 -22.45007 -21.06889 -20.95772 -18.88877 -18.13531 -16.96145 -16.77369 -15.79247 -15.57567 -15.23815 -14.94467 -14.67381 -14.21218 -13.97709 -13.93184 -13.57618 -13.18225 -12.90969 -12.68722 -12.29443 -11.99065 -11.59593 -11.37922 -11.35104 -10.99747 -10.54099 -10.48538 -10.19590 -10.02089 -9.72355 -9.41865 -9.06603 -9.02641 -8.70257 -8.59179 -6.17954 -4.18956 0.71941 0.88251 1.53873 2.48486 3.04621 3.19266 3.26412 3.28117 3.47788 4.10843 4.23450 4.30718 4.45606 4.54084 4.89407 5.04842 5.14690 5.21743 5.29969 5.47552 5.68070 5.75231 5.92557 6.01279 6.08375 6.42897 6.46574 6.52061 6.68924 7.05638 7.11966 7.53586 7.57491 7.87553 8.35603 8.46608 8.86017 9.41500 10.94960 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.038357 B = 0.002970 C = 0.002796 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 729.808074 B = 9426.712369 C =10010.309110 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.156 4.156 3 C 0.189 3.811 4 Cl -0.033 7.033 5 N -0.493 5.493 6 C 0.128 3.872 7 C -0.168 4.168 8 C 0.229 3.771 9 N -0.684 5.684 10 C 0.699 3.301 11 O -0.570 6.570 12 N -0.730 5.730 13 C 0.146 3.854 14 C -0.021 4.021 15 C -0.525 4.525 16 H 0.077 0.923 17 C 0.070 3.930 18 N -0.897 5.897 19 Si 0.883 3.117 20 H -0.276 1.276 21 H -0.286 1.286 22 H -0.267 1.267 23 H 0.077 0.923 24 H 0.080 0.920 25 H 0.071 0.929 26 H 0.169 0.831 27 H 0.162 0.838 28 H 0.410 0.590 29 H 0.395 0.605 30 H 0.064 0.936 31 H 0.065 0.935 32 H 0.022 0.978 33 H 0.018 0.982 34 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.039 22.093 9.015 24.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.163 4.163 3 C 0.024 3.976 4 Cl -0.004 7.004 5 N -0.205 5.205 6 C -0.028 4.028 7 C -0.190 4.190 8 C 0.124 3.876 9 N -0.332 5.332 10 C 0.399 3.601 11 O -0.447 6.447 12 N -0.383 5.383 13 C 0.024 3.976 14 C -0.059 4.059 15 C -0.563 4.563 16 H 0.095 0.905 17 C -0.132 4.132 18 N -0.535 5.535 19 Si 0.710 3.290 20 H -0.202 1.202 21 H -0.212 1.212 22 H -0.191 1.191 23 H 0.096 0.904 24 H 0.099 0.901 25 H 0.090 0.910 26 H 0.186 0.814 27 H 0.180 0.820 28 H 0.246 0.754 29 H 0.229 0.771 30 H 0.083 0.917 31 H 0.084 0.916 32 H 0.041 0.959 33 H 0.036 0.964 34 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -1.718 22.749 8.427 24.320 hybrid contribution -2.208 -0.997 0.725 2.529 sum -3.926 21.752 9.152 23.923 Atomic orbital electron populations 1.20750 0.89239 1.04080 1.03053 1.20223 0.97959 0.90668 1.07460 1.21106 0.89662 0.86499 1.00285 1.98386 1.73739 1.31827 1.96478 1.67005 1.06211 1.32557 1.14756 1.22545 1.00181 0.85853 0.94246 1.22491 0.93591 1.01215 1.01727 1.17414 0.91343 0.83968 0.94898 1.42625 1.26440 1.08374 1.55728 1.16001 0.84535 0.80204 0.79373 1.90930 1.19797 1.82610 1.51329 1.45589 1.22069 1.11586 1.59103 1.21521 0.97682 0.82738 0.95701 1.19804 0.94998 0.93405 0.97708 1.20879 1.05978 0.94450 1.35028 0.90526 1.24998 0.97938 0.95563 0.94725 1.69899 1.38495 1.02855 1.42205 0.86749 0.84595 0.77480 0.80205 1.20203 1.21220 1.19132 0.90411 0.90137 0.91002 0.81418 0.82032 0.75352 0.77143 0.91715 0.91649 0.95927 0.96372 0.92455 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.85 9.14 36.00 0.33 -0.52 16 2 C -0.16 -1.64 5.92 -104.26 -0.62 -2.25 16 3 C 0.19 2.18 7.27 -17.50 -0.13 2.06 16 4 Cl -0.03 -0.32 27.45 -51.86 -1.42 -1.75 16 5 N -0.49 -6.11 10.34 -10.45 -0.11 -6.22 16 6 C 0.13 1.41 11.17 -17.60 -0.20 1.22 16 7 C -0.17 -2.04 8.78 -39.26 -0.34 -2.39 16 8 C 0.23 2.68 6.33 -83.49 -0.53 2.15 16 9 N -0.68 -7.41 4.82 -14.07 -0.07 -7.48 16 10 C 0.70 10.27 8.43 -86.92 -0.73 9.54 16 11 O -0.57 -10.45 13.79 5.29 0.07 -10.37 16 12 N -0.73 -10.60 5.56 -65.23 -0.36 -10.96 16 13 C 0.15 2.74 5.61 -4.04 -0.02 2.71 16 14 C -0.02 -0.46 4.16 -27.88 -0.12 -0.57 16 15 C -0.52 -14.14 9.66 -34.44 -0.33 -14.47 16 16 H 0.08 2.25 7.99 -52.49 -0.42 1.83 16 17 C 0.07 1.94 5.47 -17.82 -0.10 1.85 16 18 N -0.90 -26.65 13.96 55.43 0.77 -25.87 16 19 Si 0.88 20.29 27.47 -169.99 -4.67 15.62 16 20 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 21 H -0.29 -6.61 7.11 56.52 0.40 -6.21 16 22 H -0.27 -5.73 6.54 56.52 0.37 -5.36 16 23 H 0.08 0.45 8.14 -51.93 -0.42 0.03 16 24 H 0.08 0.58 6.92 -51.93 -0.36 0.22 16 25 H 0.07 0.49 7.27 -51.93 -0.38 0.12 16 26 H 0.17 1.36 8.06 -52.49 -0.42 0.94 16 27 H 0.16 2.15 6.27 -52.49 -0.33 1.82 16 28 H 0.41 3.05 7.94 -40.82 -0.32 2.72 16 29 H 0.40 4.52 8.49 -40.82 -0.35 4.17 16 30 H 0.06 1.30 8.14 -51.92 -0.42 0.88 16 31 H 0.07 1.30 8.14 -51.93 -0.42 0.87 16 32 H 0.02 0.47 7.20 -51.93 -0.37 0.10 16 33 H 0.02 0.37 7.57 -51.93 -0.39 -0.02 16 34 H 0.27 7.36 8.31 -40.82 -0.34 7.02 16 LS Contribution 306.50 15.07 4.62 4.62 Total: -1.00 -32.08 306.50 -7.73 -39.81 By element: Atomic # 1 Polarization: 7.07 SS G_CDS: -3.78 Total: 3.29 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -2.79 Total: -0.69 kcal Atomic # 7 Polarization: -50.77 SS G_CDS: 0.24 Total: -50.53 kcal Atomic # 8 Polarization: -10.45 SS G_CDS: 0.07 Total: -10.37 kcal Atomic # 14 Polarization: 20.29 SS G_CDS: -4.67 Total: 15.62 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -1.42 Total: -1.75 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -32.08 -7.73 -39.81 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000810296891.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.472 kcal (2) G-P(sol) polarization free energy of solvation -32.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.392 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.811 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.340 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds