Wall clock time and date at job start Tue Mar 31 2020 05:39:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 N 1.46494 * 109.46921 * 2 1 4 4 C 1.46505 * 120.00013 * 269.99284 * 3 2 1 5 5 C 1.50696 * 109.47160 * 270.00527 * 4 3 2 6 6 H 1.07998 * 119.99940 * 359.97438 * 5 4 3 7 7 C 1.37883 * 119.99668 * 180.02562 * 5 4 3 8 8 N 1.31512 * 120.00287 * 359.97438 * 7 5 4 9 9 Si 1.86804 * 119.99665 * 179.97438 * 7 5 4 10 10 H 1.48497 * 109.47154 * 60.00075 * 9 7 5 11 11 H 1.48495 * 109.46740 * 179.97438 * 9 7 5 12 12 H 1.48500 * 109.47083 * 299.99811 * 9 7 5 13 13 C 1.34775 * 120.00242 * 89.99991 * 3 2 1 14 14 O 1.21583 * 120.00528 * 179.97438 * 13 3 2 15 15 N 1.34786 * 119.99724 * 359.97438 * 13 3 2 16 16 C 1.40029 * 119.99937 * 185.28835 * 15 13 3 17 17 C 1.39301 * 120.47198 * 32.65423 * 16 15 13 18 18 C 1.38457 * 118.37745 * 179.97438 * 17 16 15 19 19 C 1.38421 * 119.22352 * 0.02562 * 18 17 16 20 20 Cl 1.73604 * 119.55745 * 179.97438 * 19 18 17 21 21 N 1.31936 * 120.88473 * 0.25380 * 19 18 17 22 22 C 1.31856 * 121.77453 * 359.46872 * 21 19 18 23 23 H 1.09001 * 109.47628 * 300.00212 * 1 2 3 24 24 H 1.09003 * 109.47033 * 60.00081 * 1 2 3 25 25 H 1.08999 * 109.47511 * 179.97438 * 1 2 3 26 26 H 1.08995 * 109.47036 * 239.99440 * 2 1 3 27 27 H 1.08998 * 109.46607 * 119.99783 * 2 1 3 28 28 H 1.08998 * 109.46498 * 30.00903 * 4 3 2 29 29 H 1.09000 * 109.46529 * 150.00192 * 4 3 2 30 30 H 0.96989 * 120.00276 * 179.97438 * 8 7 5 31 31 H 0.96996 * 120.00174 * 5.28332 * 15 13 3 32 32 H 1.07995 * 120.80932 * 359.96073 * 17 16 15 33 33 H 1.08002 * 120.38715 * 180.02562 * 18 17 16 34 34 H 1.07998 * 119.65718 * 180.28805 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.2626 2.0718 -1.2688 5 6 3.6858 1.8349 -1.7037 6 1 4.3429 1.2308 -1.0956 7 6 4.1495 2.3904 -2.8774 8 7 3.3496 3.1265 -3.6176 9 14 5.9140 2.0974 -3.4162 10 1 6.1418 0.6408 -3.5940 11 1 6.1615 2.7973 -4.7022 12 1 6.8411 2.6206 -2.3808 13 6 2.2429 2.0166 1.1672 14 8 2.6486 3.1627 1.1672 15 7 2.0178 1.3813 2.3344 16 6 2.1443 2.0745 3.5445 17 6 1.8304 3.4297 3.6185 18 6 1.9708 4.0722 4.8369 19 6 2.4154 3.3529 5.9329 20 17 2.5952 4.1500 7.4646 21 7 2.7095 2.0711 5.8277 22 6 2.5845 1.4213 4.6872 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 -1.0276 -0.0005 26 1 1.8933 -0.5139 -0.8899 27 1 1.8933 -0.5138 0.8900 28 1 1.5817 1.6876 -2.0283 29 1 2.0956 3.1410 -1.1384 30 1 3.6759 3.5175 -4.4430 31 1 1.7681 0.4441 2.3363 32 1 1.4862 3.9662 2.7467 33 1 1.7362 5.1222 4.9311 34 1 2.8305 0.3708 4.6409 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000049211098.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:39:04 Heat of formation + Delta-G solvation = 7.222034 kcal Electronic energy + Delta-G solvation = -19642.341506 eV Core-core repulsion = 16408.604532 eV Total energy + Delta-G solvation = -3233.736974 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.083 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -40.79471 -39.32400 -36.70244 -35.69573 -34.77623 -32.82031 -32.26678 -30.28190 -29.78157 -26.99467 -24.05970 -23.72114 -23.18427 -22.25082 -19.61196 -18.28372 -17.33934 -16.97622 -16.49785 -16.32593 -15.21093 -14.88588 -14.41736 -14.37377 -14.11771 -13.80572 -13.39532 -13.12583 -12.81320 -12.50839 -12.15074 -11.89658 -11.83127 -11.36659 -11.29239 -11.03223 -10.91953 -10.61513 -10.58894 -10.19515 -9.92192 -9.81355 -9.70294 -9.30469 -8.49213 -8.24575 -7.77581 -6.10685 -4.15797 0.87295 1.17106 1.79403 2.93797 3.28330 3.33236 3.36185 3.43837 3.81949 4.17981 4.40255 4.44371 4.77510 4.88321 5.00891 5.13417 5.23888 5.44881 5.46295 5.55587 5.75285 5.84652 6.02398 6.08541 6.18473 6.34364 6.61774 6.76576 7.21582 7.36042 7.50498 7.63310 7.85894 8.14631 8.38618 8.83188 9.03805 9.49740 10.97231 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.021885 B = 0.003959 C = 0.003609 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1279.099798 B = 7070.219309 C = 7757.187919 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.106 3.894 3 N -0.602 5.602 4 C 0.261 3.739 5 C -0.531 4.531 6 H 0.057 0.943 7 C 0.063 3.937 8 N -0.894 5.894 9 Si 0.898 3.102 10 H -0.277 1.277 11 H -0.286 1.286 12 H -0.276 1.276 13 C 0.697 3.303 14 O -0.566 6.566 15 N -0.689 5.689 16 C 0.143 3.857 17 C -0.071 4.071 18 C -0.128 4.128 19 C 0.141 3.859 20 Cl -0.043 7.043 21 N -0.458 5.458 22 C 0.080 3.920 23 H 0.050 0.950 24 H 0.064 0.936 25 H 0.062 0.938 26 H 0.089 0.911 27 H 0.058 0.942 28 H 0.036 0.964 29 H 0.045 0.955 30 H 0.265 0.735 31 H 0.406 0.594 32 H 0.160 0.840 33 H 0.146 0.854 34 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.634 -4.692 14.645 16.748 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.019 4.019 3 N -0.336 5.336 4 C 0.142 3.858 5 C -0.570 4.570 6 H 0.075 0.925 7 C -0.139 4.139 8 N -0.533 5.533 9 Si 0.726 3.274 10 H -0.202 1.202 11 H -0.211 1.211 12 H -0.202 1.202 13 C 0.399 3.601 14 O -0.442 6.442 15 N -0.339 5.339 16 C 0.043 3.957 17 C -0.099 4.099 18 C -0.149 4.149 19 C -0.024 4.024 20 Cl -0.014 7.014 21 N -0.168 5.168 22 C -0.081 4.081 23 H 0.069 0.931 24 H 0.083 0.917 25 H 0.081 0.919 26 H 0.107 0.893 27 H 0.076 0.924 28 H 0.054 0.946 29 H 0.063 0.937 30 H 0.074 0.926 31 H 0.244 0.756 32 H 0.177 0.823 33 H 0.164 0.836 34 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -6.048 -4.134 15.157 16.835 hybrid contribution 0.684 -0.202 -1.010 1.236 sum -5.365 -4.336 14.148 15.740 Atomic orbital electron populations 1.22247 0.96458 1.01640 1.02601 1.21408 0.93720 0.84134 1.02606 1.47666 1.66385 1.13437 1.06157 1.19268 0.96356 0.93475 0.76738 1.21399 0.96923 1.32248 1.06384 0.92514 1.24914 0.97878 0.94813 0.96319 1.69906 1.35768 1.33207 1.14397 0.86556 0.84727 0.78272 0.77862 1.20238 1.21122 1.20179 1.15947 0.79110 0.84988 0.80052 1.90916 1.51156 1.16694 1.85428 1.43005 1.73144 1.14428 1.03348 1.18668 0.97116 0.93242 0.86648 1.21759 0.96501 0.93672 0.97999 1.21747 1.00532 1.01585 0.91051 1.21458 1.02375 0.90564 0.87996 1.98380 1.96225 1.77201 1.29627 1.66881 1.14843 1.08286 1.26840 1.22347 0.98708 1.00492 0.86504 0.93065 0.91720 0.91948 0.89298 0.92402 0.94608 0.93675 0.92571 0.75622 0.82250 0.83608 0.81847 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.01 10.24 37.16 0.38 -1.63 16 2 C 0.11 1.50 5.94 -4.04 -0.02 1.47 16 3 N -0.60 -11.74 2.46 -180.81 -0.44 -12.19 16 4 C 0.26 6.44 5.16 -5.19 -0.03 6.41 16 5 C -0.53 -14.52 9.39 -34.44 -0.32 -14.84 16 6 H 0.06 1.56 7.81 -52.49 -0.41 1.15 16 7 C 0.06 1.76 5.46 -17.82 -0.10 1.66 16 8 N -0.89 -25.82 13.29 55.43 0.74 -25.08 16 9 Si 0.90 21.44 29.54 -169.99 -5.02 16.42 16 10 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 11 H -0.29 -6.72 7.11 56.52 0.40 -6.32 16 12 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 13 C 0.70 13.59 8.04 -86.91 -0.70 12.89 16 14 O -0.57 -13.41 13.61 5.29 0.07 -13.34 16 15 N -0.69 -9.90 5.24 -14.12 -0.07 -9.98 16 16 C 0.14 2.03 6.31 -83.51 -0.53 1.50 16 17 C -0.07 -1.04 8.77 -39.11 -0.34 -1.38 16 18 C -0.13 -1.64 9.87 -39.43 -0.39 -2.03 16 19 C 0.14 1.89 7.27 -17.44 -0.13 1.77 16 20 Cl -0.04 -0.50 29.10 -51.86 -1.51 -2.01 16 21 N -0.46 -6.38 10.33 -10.21 -0.11 -6.48 16 22 C 0.08 1.01 11.12 -17.34 -0.19 0.82 16 23 H 0.05 0.58 8.14 -51.93 -0.42 0.16 16 24 H 0.06 0.87 8.14 -51.93 -0.42 0.44 16 25 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 26 H 0.09 1.33 8.07 -51.93 -0.42 0.91 16 27 H 0.06 0.64 6.29 -51.93 -0.33 0.32 16 28 H 0.04 0.89 8.07 -51.93 -0.42 0.47 16 29 H 0.05 1.26 7.42 -51.93 -0.39 0.88 16 30 H 0.26 7.26 8.31 -40.82 -0.34 6.92 16 31 H 0.41 4.44 6.51 -40.82 -0.27 4.17 16 32 H 0.16 2.58 6.47 -52.49 -0.34 2.24 16 33 H 0.15 1.52 8.06 -52.49 -0.42 1.09 16 34 H 0.16 1.55 8.06 -52.49 -0.42 1.13 16 LS Contribution 311.95 15.07 4.70 4.70 Total: -1.00 -32.06 311.95 -7.83 -39.89 By element: Atomic # 1 Polarization: 5.24 SS G_CDS: -3.81 Total: 1.43 kcal Atomic # 6 Polarization: 9.01 SS G_CDS: -2.37 Total: 6.64 kcal Atomic # 7 Polarization: -53.85 SS G_CDS: 0.11 Total: -53.73 kcal Atomic # 8 Polarization: -13.41 SS G_CDS: 0.07 Total: -13.34 kcal Atomic # 14 Polarization: 21.44 SS G_CDS: -5.02 Total: 16.42 kcal Atomic # 17 Polarization: -0.50 SS G_CDS: -1.51 Total: -2.01 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -32.06 -7.83 -39.89 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000049211098.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.114 kcal (2) G-P(sol) polarization free energy of solvation -32.064 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.828 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.892 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.222 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds