Wall clock time and date at job start Tue Mar 31 2020 05:18:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52997 * 109.47144 * 2 1 4 4 C 1.50703 * 109.47006 * 119.99851 * 2 1 3 5 5 N 1.31936 * 119.01600 * 299.73249 * 4 2 1 6 6 C 1.32135 * 121.05549 * 180.27596 * 5 4 2 7 7 C 1.38993 * 119.12400 * 0.02562 * 6 5 4 8 8 Cl 1.73604 * 120.88158 * 179.97438 * 7 6 5 9 9 C 1.39627 * 118.22944 * 359.97438 * 7 6 5 10 10 C 1.48370 * 120.56606 * 179.97438 * 9 7 6 11 11 O 1.21495 * 119.99624 * 0.02583 * 10 9 7 12 12 N 1.34775 * 120.00146 * 180.02562 * 10 9 7 13 13 C 1.46500 * 119.99792 * 179.97438 * 12 10 9 14 14 C 1.50696 * 109.47085 * 179.97438 * 13 12 10 15 15 H 1.07999 * 120.00136 * 0.02562 * 14 13 12 16 16 C 1.37882 * 120.00181 * 179.97438 * 14 13 12 17 17 N 1.31509 * 119.99787 * 179.97438 * 16 14 13 18 18 Si 1.86799 * 119.99860 * 0.02562 * 16 14 13 19 19 H 1.48506 * 109.47023 * 89.99324 * 18 16 14 20 20 H 1.48496 * 109.46999 * 209.99296 * 18 16 14 21 21 H 1.48504 * 109.46995 * 329.99772 * 18 16 14 22 22 N 1.31524 * 119.02281 * 119.99787 * 4 2 1 23 23 H 1.08999 * 109.47292 * 180.02562 * 1 2 3 24 24 H 1.08995 * 109.47247 * 300.00485 * 1 2 3 25 25 H 1.09004 * 109.46727 * 60.00605 * 1 2 3 26 26 H 1.09002 * 109.47439 * 239.99157 * 2 1 3 27 27 H 1.09002 * 109.46736 * 179.97438 * 3 2 1 28 28 H 1.08995 * 109.46937 * 299.99572 * 3 2 1 29 29 H 1.09003 * 109.47265 * 59.99959 * 3 2 1 30 30 H 1.07998 * 120.43707 * 179.97438 * 6 5 4 31 31 H 0.96996 * 120.00225 * 359.97438 * 12 10 9 32 32 H 1.09002 * 109.47414 * 299.99949 * 13 12 10 33 33 H 1.08995 * 109.47221 * 59.99809 * 13 12 10 34 34 H 0.97008 * 119.99692 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0323 -0.7104 1.2305 5 7 1.7061 -0.2398 2.4191 6 6 2.1288 -0.8276 3.5245 7 6 2.9298 -1.9591 3.4251 8 17 3.5110 -2.7672 4.8475 9 6 3.2546 -2.4286 2.1509 10 6 4.1067 -3.6317 1.9845 11 8 4.5278 -4.2177 2.9620 12 7 4.4136 -4.0746 0.7492 13 6 5.2555 -5.2623 0.5850 14 6 5.4458 -5.5441 -0.8830 15 1 4.9861 -4.9024 -1.6201 16 6 6.2078 -6.6205 -1.2853 17 7 6.3734 -6.8667 -2.5665 18 14 7.0036 -7.7300 -0.0105 19 1 6.0728 -8.8346 0.3345 20 1 8.2606 -8.2960 -0.5625 21 1 7.3097 -6.9414 1.2100 22 7 2.7871 -1.7780 1.0876 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8901 26 1 1.8934 -0.5140 -0.8899 27 1 3.1300 1.4424 0.0005 28 1 1.6767 1.9562 -0.8900 29 1 1.6767 1.9563 0.8900 30 1 1.8560 -0.4336 4.4923 31 1 4.0771 -3.6071 -0.0312 32 1 6.2254 -5.0874 1.0505 33 1 4.7739 -6.1174 1.0593 34 1 6.9092 -7.6242 -2.8496 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000050367055.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:18:09 Heat of formation + Delta-G solvation = 1.714358 kcal Electronic energy + Delta-G solvation = -19479.797685 eV Core-core repulsion = 16245.821880 eV Total energy + Delta-G solvation = -3233.975805 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.083 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -41.50101 -38.90708 -36.82270 -35.61570 -34.51037 -34.06613 -32.33914 -31.07676 -28.28187 -27.36565 -25.68898 -24.67916 -22.62584 -21.19331 -20.04043 -18.38157 -17.99415 -16.62080 -16.14512 -15.70177 -15.56054 -15.12873 -14.44088 -14.40613 -14.24995 -14.08605 -13.28943 -13.07642 -12.47341 -12.39272 -12.28052 -12.25742 -12.07623 -11.49285 -11.35600 -11.22938 -11.11001 -11.02999 -10.99049 -10.78342 -10.08434 -9.98601 -9.51963 -9.31651 -9.09182 -8.80767 -8.25461 -6.22949 -4.25800 0.26967 0.57045 1.88264 2.91241 3.24715 3.28564 3.34280 3.39581 3.57439 3.68812 3.78383 4.31194 4.42137 4.55173 4.68639 4.83504 4.90506 5.11902 5.24862 5.40652 5.45289 5.60311 5.63597 5.74558 5.91690 6.01689 6.12585 6.47750 6.70434 6.99044 7.06826 7.30918 7.68256 8.04799 8.42366 8.62757 8.79422 9.35731 10.88905 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.016853 B = 0.004951 C = 0.003930 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1661.036593 B = 5653.842196 C = 7123.820055 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.028 4.028 3 C -0.141 4.141 4 C 0.323 3.677 5 N -0.491 5.491 6 C 0.162 3.838 7 C -0.111 4.111 8 Cl -0.002 7.002 9 C 0.156 3.844 10 C 0.545 3.455 11 O -0.521 6.521 12 N -0.673 5.673 13 C 0.219 3.781 14 C -0.545 4.545 15 H 0.082 0.918 16 C 0.079 3.921 17 N -0.890 5.890 18 Si 0.876 3.124 19 H -0.272 1.272 20 H -0.283 1.283 21 H -0.260 1.260 22 N -0.476 5.476 23 H 0.055 0.945 24 H 0.066 0.934 25 H 0.068 0.932 26 H 0.103 0.897 27 H 0.055 0.945 28 H 0.068 0.932 29 H 0.066 0.934 30 H 0.182 0.818 31 H 0.408 0.592 32 H 0.031 0.969 33 H 0.026 0.974 34 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.827 15.427 9.415 21.068 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.048 4.048 3 C -0.199 4.199 4 C 0.056 3.944 5 N -0.205 5.205 6 C -0.007 4.007 7 C -0.144 4.144 8 Cl 0.027 6.973 9 C 0.007 3.993 10 C 0.326 3.674 11 O -0.398 6.398 12 N -0.322 5.322 13 C 0.097 3.903 14 C -0.583 4.583 15 H 0.100 0.900 16 C -0.125 4.125 17 N -0.527 5.527 18 Si 0.702 3.298 19 H -0.198 1.198 20 H -0.208 1.208 21 H -0.185 1.185 22 N -0.193 5.193 23 H 0.074 0.926 24 H 0.085 0.915 25 H 0.087 0.913 26 H 0.121 0.879 27 H 0.074 0.926 28 H 0.087 0.913 29 H 0.085 0.915 30 H 0.199 0.801 31 H 0.243 0.757 32 H 0.049 0.951 33 H 0.044 0.956 34 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -10.648 15.179 9.246 20.719 hybrid contribution 0.662 -0.968 1.063 1.583 sum -9.986 14.211 10.309 20.198 Atomic orbital electron populations 1.21804 0.92805 1.02409 1.02890 1.20051 0.96737 0.95913 0.92139 1.21804 1.01246 0.93959 1.02897 1.23311 0.89350 0.88471 0.93307 1.68196 1.22363 1.31501 0.98426 1.23372 0.89838 0.88955 0.98535 1.22894 1.01884 0.98207 0.91410 1.98433 1.86554 1.77832 1.34497 1.22019 0.94191 0.95364 0.87764 1.17714 0.81523 0.83032 0.85169 1.90840 1.53453 1.56979 1.38488 1.46126 1.49483 1.30072 1.06491 1.19641 0.89887 0.82469 0.98299 1.21059 1.33654 1.14043 0.89526 0.90026 1.24772 0.95378 0.96921 0.95386 1.69877 1.39298 1.29171 1.14380 0.86839 0.79389 0.81392 0.82213 1.19785 1.20829 1.18456 1.68409 1.10133 1.08075 1.32638 0.92551 0.91508 0.91341 0.87878 0.92560 0.91336 0.91497 0.80066 0.75662 0.95149 0.95606 0.92204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.20 9.09 37.16 0.34 -0.87 16 2 C -0.03 -0.28 3.25 -91.77 -0.30 -0.58 16 3 C -0.14 -1.20 9.08 37.16 0.34 -0.87 16 4 C 0.32 4.18 6.34 -157.30 -1.00 3.19 16 5 N -0.49 -5.89 9.78 -10.70 -0.10 -5.99 16 6 C 0.16 1.82 11.14 -17.14 -0.19 1.63 16 7 C -0.11 -1.57 6.40 -38.78 -0.25 -1.82 16 8 Cl 0.00 -0.03 26.25 -51.86 -1.36 -1.39 16 9 C 0.16 2.59 6.79 -82.61 -0.56 2.03 16 10 C 0.54 10.88 7.82 -12.09 -0.09 10.79 16 11 O -0.52 -11.42 14.15 5.37 0.08 -11.34 16 12 N -0.67 -14.28 5.54 -62.26 -0.35 -14.62 16 13 C 0.22 5.35 4.50 -5.20 -0.02 5.33 16 14 C -0.55 -14.94 9.83 -34.44 -0.34 -15.28 16 15 H 0.08 2.35 7.84 -52.49 -0.41 1.93 16 16 C 0.08 2.23 5.47 -17.82 -0.10 2.14 16 17 N -0.89 -26.31 13.96 55.43 0.77 -25.54 16 18 Si 0.88 21.19 27.47 -169.99 -4.67 16.52 16 19 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 20 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 21 H -0.26 -6.22 6.54 56.52 0.37 -5.85 16 22 N -0.48 -7.34 9.56 -7.31 -0.07 -7.41 16 23 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 24 H 0.07 0.57 8.01 -51.93 -0.42 0.15 16 25 H 0.07 0.46 8.14 -51.93 -0.42 0.04 16 26 H 0.10 1.06 8.09 -51.93 -0.42 0.64 16 27 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 28 H 0.07 0.46 8.14 -51.93 -0.42 0.04 16 29 H 0.07 0.57 8.00 -51.93 -0.42 0.16 16 30 H 0.18 1.35 8.06 -52.49 -0.42 0.93 16 31 H 0.41 8.12 7.71 -40.82 -0.31 7.81 16 32 H 0.03 0.77 7.20 -51.93 -0.37 0.40 16 33 H 0.03 0.65 7.57 -51.93 -0.39 0.26 16 34 H 0.27 7.40 8.31 -40.82 -0.34 7.06 16 LS Contribution 310.53 15.07 4.68 4.68 Total: -1.00 -30.84 310.53 -7.22 -38.06 By element: Atomic # 1 Polarization: 5.37 SS G_CDS: -4.03 Total: 1.35 kcal Atomic # 6 Polarization: 7.87 SS G_CDS: -2.17 Total: 5.69 kcal Atomic # 7 Polarization: -53.82 SS G_CDS: 0.25 Total: -53.57 kcal Atomic # 8 Polarization: -11.42 SS G_CDS: 0.08 Total: -11.34 kcal Atomic # 14 Polarization: 21.19 SS G_CDS: -4.67 Total: 16.52 kcal Atomic # 17 Polarization: -0.03 SS G_CDS: -1.36 Total: -1.39 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -30.84 -7.22 -38.06 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000050367055.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.773 kcal (2) G-P(sol) polarization free energy of solvation -30.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.221 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.059 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.714 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds