Wall clock time and date at job start Tue Mar 31 2020 05:36:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09003 * 109.47250 * 2 1 4 4 C 1.50701 * 109.47428 * 239.99598 * 2 1 3 5 5 O 1.21275 * 120.00032 * 240.00227 * 4 2 1 6 6 N 1.34776 * 119.99862 * 60.00000 * 4 2 1 7 7 C 1.39446 * 119.99810 * 185.48476 * 6 4 2 8 8 C 1.39027 * 119.68413 * 174.60326 * 7 6 4 9 9 C 1.38356 * 119.12164 * 180.02562 * 8 7 6 10 10 C 1.38938 * 118.48215 * 0.27725 * 9 8 7 11 11 Cl 1.73588 * 120.35799 * 179.72528 * 10 9 8 12 12 C 1.38183 * 119.28201 * 359.47546 * 10 9 8 13 13 N 1.31943 * 120.82753 * 0.53737 * 12 10 9 14 14 N 1.46501 * 109.47052 * 119.99416 * 2 1 3 15 15 C 1.46508 * 119.99699 * 59.99973 * 14 2 1 16 16 C 1.36937 * 120.00461 * 240.00154 * 14 2 1 17 17 H 1.07997 * 119.99745 * 24.55634 * 16 14 2 18 18 C 1.38812 * 120.00157 * 204.56277 * 16 14 2 19 19 N 1.31617 * 120.00048 * 7.50174 * 18 16 14 20 20 Si 1.86801 * 119.99936 * 187.50483 * 18 16 14 21 21 H 1.48500 * 109.46867 * 359.97438 * 20 18 16 22 22 H 1.48498 * 109.47326 * 119.99560 * 20 18 16 23 23 H 1.48498 * 109.47003 * 239.99838 * 20 18 16 24 24 H 1.09003 * 109.47250 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.47530 * 300.00460 * 1 2 3 26 26 H 1.08999 * 109.46793 * 60.00282 * 1 2 3 27 27 H 0.96994 * 120.00231 * 5.48346 * 6 4 2 28 28 H 1.08003 * 120.44294 * 0.02702 * 8 7 6 29 29 H 1.07997 * 120.75914 * 180.02562 * 9 8 7 30 30 H 1.08001 * 119.58807 * 180.23107 * 12 10 9 31 31 H 1.09007 * 109.46651 * 95.41860 * 15 14 2 32 32 H 1.09002 * 109.47033 * 215.41012 * 15 14 2 33 33 H 1.08996 * 109.47270 * 335.41633 * 15 14 2 34 34 H 0.97004 * 120.00303 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0324 -0.7105 -1.2304 5 8 2.7296 -1.6965 -1.1190 6 7 1.7068 -0.2501 -2.4545 7 6 2.0746 -0.9701 -3.5907 8 6 1.6396 -0.5501 -4.8426 9 6 2.0110 -1.2734 -5.9621 10 6 2.8039 -2.4011 -5.7892 11 17 3.2923 -3.3486 -7.1593 12 6 3.2038 -2.7574 -4.5154 13 7 2.8334 -2.0472 -3.4670 14 7 2.0183 -0.6905 1.1963 15 6 1.6643 -2.0931 1.4282 16 6 2.8055 -0.0250 2.0977 17 1 2.7535 1.0514 2.1686 18 6 3.6705 -0.7338 2.9200 19 7 3.8441 -2.0253 2.7350 20 14 4.5879 0.1452 4.2894 21 1 4.2211 1.5842 4.2865 22 1 4.2217 -0.4568 5.5965 23 1 6.0505 0.0073 4.0732 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 1.2167 0.5820 -2.5452 28 1 1.0201 0.3292 -4.9401 29 1 1.6885 -0.9707 -6.9473 30 1 3.8234 -3.6310 -4.3757 31 1 2.4628 -2.7355 1.0568 32 1 1.5295 -2.2619 2.4966 33 1 0.7374 -2.3254 0.9038 34 1 4.4482 -2.5208 3.3099 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068972684.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:36:38 Heat of formation + Delta-G solvation = 39.773686 kcal Electronic energy + Delta-G solvation = -19851.670084 eV Core-core repulsion = 16619.344656 eV Total energy + Delta-G solvation = -3232.325429 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.083 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -40.63038 -38.81453 -36.66912 -35.50714 -34.35162 -32.47974 -32.15160 -29.99237 -28.79370 -25.97795 -24.57346 -23.94652 -23.19526 -21.41257 -19.43369 -18.01961 -16.99164 -16.68370 -16.44691 -15.48094 -15.10136 -14.99868 -14.46222 -13.99863 -13.72763 -13.30081 -13.27160 -12.81132 -12.65259 -12.38490 -12.04183 -11.87099 -11.41935 -11.32301 -10.85595 -10.79937 -10.62697 -10.38369 -10.20191 -9.96043 -9.92967 -9.87274 -9.66441 -8.77992 -8.45640 -8.07389 -6.74557 -5.70129 -3.22028 0.95745 1.16443 2.01985 3.13619 3.28266 3.39158 3.43952 3.46651 3.90009 4.41405 4.48177 4.66838 4.83004 4.87477 5.31662 5.36414 5.49279 5.54478 5.70630 5.79688 5.83228 5.91930 6.12244 6.18660 6.41394 6.64752 6.82616 6.92397 7.43306 7.48666 7.78863 8.04336 8.15141 8.38536 8.87744 9.22257 9.82626 10.31903 11.31629 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.028828 B = 0.003863 C = 0.003611 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 971.046064 B = 7246.935629 C = 7752.661642 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.158 3.842 3 H 0.089 0.911 4 C 0.467 3.533 5 O -0.439 6.439 6 N -0.669 5.669 7 C 0.378 3.622 8 C -0.211 4.211 9 C -0.038 4.038 10 C -0.138 4.138 11 Cl -0.070 7.070 12 C 0.155 3.845 13 N -0.461 5.461 14 N -0.568 5.568 15 C 0.167 3.833 16 C -0.270 4.270 17 H 0.071 0.929 18 C 0.011 3.989 19 N -0.891 5.891 20 Si 0.907 3.093 21 H -0.277 1.277 22 H -0.288 1.288 23 H -0.289 1.289 24 H 0.055 0.945 25 H 0.067 0.933 26 H 0.046 0.954 27 H 0.411 0.589 28 H 0.142 0.858 29 H 0.143 0.857 30 H 0.164 0.836 31 H 0.046 0.954 32 H 0.041 0.959 33 H -0.007 1.007 34 H 0.253 0.747 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.897 3.550 -17.243 18.908 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.216 4.216 2 C 0.044 3.956 3 H 0.107 0.893 4 C 0.251 3.749 5 O -0.302 6.302 6 N -0.318 5.318 7 C 0.145 3.855 8 C -0.235 4.235 9 C -0.064 4.064 10 C -0.169 4.169 11 Cl -0.041 7.041 12 C -0.005 4.005 13 N -0.176 5.176 14 N -0.288 5.288 15 C 0.023 3.977 16 C -0.399 4.399 17 H 0.089 0.911 18 C -0.189 4.189 19 N -0.533 5.533 20 Si 0.736 3.264 21 H -0.202 1.202 22 H -0.215 1.215 23 H -0.216 1.216 24 H 0.074 0.926 25 H 0.086 0.914 26 H 0.065 0.935 27 H 0.247 0.753 28 H 0.160 0.840 29 H 0.161 0.839 30 H 0.181 0.819 31 H 0.064 0.936 32 H 0.060 0.940 33 H 0.012 0.988 34 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges -5.965 2.345 -16.066 17.298 hybrid contribution 0.187 0.954 -0.490 1.089 sum -5.779 3.299 -16.557 17.844 Atomic orbital electron populations 1.22224 0.96170 1.02019 1.01155 1.20589 0.93698 0.96779 0.84524 0.89283 1.23839 0.80780 0.86574 0.83719 1.90802 1.31113 1.23643 1.84656 1.44798 1.56817 1.25577 1.04571 1.18968 0.90145 0.89554 0.86798 1.21491 1.06819 1.04090 0.91066 1.21193 0.93873 0.91948 0.99425 1.21917 1.06759 0.98263 0.89951 1.98349 1.90781 1.71777 1.43221 1.22779 0.94887 0.97589 0.85276 1.68021 1.12310 1.05865 1.31362 1.43875 1.57533 1.10347 1.17010 1.20847 0.94552 0.84165 0.98181 1.19253 1.16578 0.91534 1.12549 0.91096 1.25215 0.97249 0.96057 1.00395 1.70122 1.37875 1.06556 1.38796 0.86167 0.79625 0.78940 0.81656 1.20208 1.21503 1.21586 0.92634 0.91426 0.93457 0.75275 0.84033 0.83938 0.81900 0.93590 0.94043 0.98805 0.93623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.42 9.09 37.16 0.34 -2.09 16 2 C 0.16 3.12 3.12 -69.08 -0.22 2.91 16 3 H 0.09 1.63 7.87 -51.93 -0.41 1.22 16 4 C 0.47 9.40 7.01 -10.99 -0.08 9.33 16 5 O -0.44 -11.12 13.13 5.56 0.07 -11.05 16 6 N -0.67 -9.98 5.24 -11.42 -0.06 -10.04 16 7 C 0.38 5.75 7.42 -154.68 -1.15 4.61 16 8 C -0.21 -2.30 9.94 -39.25 -0.39 -2.69 16 9 C -0.04 -0.39 9.97 -39.28 -0.39 -0.78 16 10 C -0.14 -1.66 6.34 -39.34 -0.25 -1.91 16 11 Cl -0.07 -0.73 28.98 -51.86 -1.50 -2.24 16 12 C 0.15 2.26 10.98 -17.52 -0.19 2.07 16 13 N -0.46 -8.32 7.89 -12.33 -0.10 -8.42 16 14 N -0.57 -14.41 2.59 -174.80 -0.45 -14.86 16 15 C 0.17 4.35 7.59 59.85 0.45 4.81 16 16 C -0.27 -7.40 9.59 -15.06 -0.14 -7.54 16 17 H 0.07 1.85 7.81 -52.49 -0.41 1.44 16 18 C 0.01 0.32 5.21 -17.43 -0.09 0.23 16 19 N -0.89 -26.80 10.51 55.49 0.58 -26.21 16 20 Si 0.91 21.87 29.56 -169.99 -5.02 16.85 16 21 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 22 H -0.29 -6.95 7.11 56.52 0.40 -6.55 16 23 H -0.29 -7.09 7.11 56.52 0.40 -6.69 16 24 H 0.05 0.93 6.66 -51.93 -0.35 0.58 16 25 H 0.07 1.05 8.14 -51.93 -0.42 0.62 16 26 H 0.05 0.54 7.70 -51.93 -0.40 0.14 16 27 H 0.41 4.25 8.30 -40.82 -0.34 3.91 16 28 H 0.14 1.04 8.06 -52.48 -0.42 0.62 16 29 H 0.14 1.05 8.06 -52.49 -0.42 0.63 16 30 H 0.16 2.14 8.06 -52.49 -0.42 1.72 16 31 H 0.05 1.37 6.64 -51.93 -0.34 1.02 16 32 H 0.04 1.13 7.32 -51.93 -0.38 0.75 16 33 H -0.01 -0.15 6.44 -51.93 -0.33 -0.49 16 34 H 0.25 7.35 8.31 -40.82 -0.34 7.01 16 LS Contribution 304.85 15.07 4.59 4.59 Total: -1.00 -34.75 304.85 -7.78 -42.53 By element: Atomic # 1 Polarization: 3.71 SS G_CDS: -3.79 Total: -0.08 kcal Atomic # 6 Polarization: 11.04 SS G_CDS: -2.11 Total: 8.93 kcal Atomic # 7 Polarization: -59.51 SS G_CDS: -0.03 Total: -59.53 kcal Atomic # 8 Polarization: -11.12 SS G_CDS: 0.07 Total: -11.05 kcal Atomic # 14 Polarization: 21.87 SS G_CDS: -5.02 Total: 16.85 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.50 Total: -2.24 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -34.75 -7.78 -42.53 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068972684.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.305 kcal (2) G-P(sol) polarization free energy of solvation -34.748 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.556 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.783 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.531 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds