Wall clock time and date at job start Tue Mar 31 2020 05:15:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38426 * 120.83427 * 2 1 4 4 Cl 1.73598 * 120.42637 * 0.02562 * 3 2 1 5 5 N 1.32607 * 119.14476 * 180.27439 * 3 2 1 6 6 C 1.31790 * 120.93646 * 359.72706 * 5 3 2 7 7 N 1.31753 * 121.82737 * 359.97438 * 6 5 3 8 8 C 1.32861 * 120.75862 * 0.02562 * 7 6 5 9 9 O 1.35523 * 120.50480 * 180.02562 * 8 7 6 10 10 C 1.42897 * 116.99952 * 0.02562 * 9 8 7 11 11 H 1.09004 * 110.91562 * 327.54569 * 10 9 8 12 12 C 1.55448 * 111.11758 * 203.55666 * 10 9 8 13 13 C 1.54321 * 102.96961 * 206.46102 * 12 10 9 14 14 N 1.47026 * 107.26791 * 22.19024 * 13 12 10 15 15 C 1.36940 * 125.64258 * 181.03445 * 14 13 12 16 16 H 1.08003 * 119.99660 * 180.02562 * 15 14 13 17 17 C 1.38811 * 120.00559 * 0.02875 * 15 14 13 18 18 N 1.31617 * 119.99776 * 359.97438 * 17 15 14 19 19 Si 1.86801 * 120.00230 * 179.97438 * 17 15 14 20 20 H 1.48501 * 109.46764 * 0.02562 * 19 17 15 21 21 H 1.48504 * 109.46723 * 120.00066 * 19 17 15 22 22 H 1.48499 * 109.47140 * 239.99844 * 19 17 15 23 23 C 1.47419 * 108.70576 * 1.06162 * 14 13 12 24 24 H 1.09006 * 109.47546 * 270.28768 * 1 2 3 25 25 H 1.09005 * 109.46962 * 30.28730 * 1 2 3 26 26 H 1.08996 * 109.47634 * 150.28671 * 1 2 3 27 27 H 1.07998 * 119.07967 * 180.02562 * 6 5 3 28 28 H 1.08998 * 110.70855 * 88.08906 * 12 10 9 29 29 H 1.08998 * 110.85957 * 324.90522 * 12 10 9 30 30 H 1.08998 * 109.88101 * 262.77542 * 13 12 10 31 31 H 1.08997 * 110.01327 * 141.67909 * 13 12 10 32 32 H 0.97004 * 120.00521 * 179.97438 * 18 17 15 33 33 H 1.09002 * 110.36926 * 94.70918 * 23 14 13 34 34 H 1.08995 * 110.36556 * 216.92202 * 23 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2165 1.1886 0.0000 4 17 1.3818 2.7107 0.0007 5 7 3.5420 1.1495 -0.0055 6 6 4.1859 -0.0004 -0.0056 7 7 3.5486 -1.1535 0.0002 8 6 2.2207 -1.1960 0.0060 9 8 1.5705 -2.3851 0.0125 10 6 2.3764 -3.5652 0.0135 11 1 3.3033 -3.4038 -0.5371 12 6 1.5923 -4.7792 -0.5589 13 6 2.2750 -5.9844 0.1215 14 7 2.9295 -5.4847 1.3396 15 6 3.6630 -6.2375 2.2174 16 1 4.1050 -5.7745 3.0874 17 6 3.8385 -7.5954 1.9893 18 7 3.2995 -8.1597 0.9294 19 14 4.8397 -8.6220 3.1864 20 1 5.3333 -7.7568 4.2878 21 1 3.9862 -9.6995 3.7485 22 1 5.9948 -9.2259 2.4749 23 6 2.6649 -4.0395 1.4596 24 1 -0.3634 0.0052 1.0277 25 1 -0.3633 0.8874 -0.5183 26 1 -0.3634 -0.8925 -0.5093 27 1 5.2658 0.0028 -0.0098 28 1 1.7034 -4.8339 -1.6419 29 1 0.5392 -4.7262 -0.2830 30 1 3.0186 -6.4161 -0.5484 31 1 1.5304 -6.7364 0.3827 32 1 3.4224 -9.1085 0.7696 33 1 1.7978 -3.8642 2.0964 34 1 3.5388 -3.5258 1.8601 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001226077941.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:15:05 Heat of formation + Delta-G solvation = 33.155427 kcal Electronic energy + Delta-G solvation = -19797.130608 eV Core-core repulsion = 16564.518190 eV Total energy + Delta-G solvation = -3232.612418 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.083 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.41526 -38.93846 -37.14302 -36.48744 -33.79396 -33.11952 -32.15131 -29.35289 -27.74615 -27.46587 -24.95997 -23.84910 -23.18184 -20.73343 -20.23143 -18.79969 -18.20139 -16.93163 -16.16518 -15.85265 -14.90512 -14.66642 -14.61981 -14.51816 -13.95234 -13.84689 -13.17845 -12.99581 -12.65178 -12.45365 -12.37880 -12.05070 -11.81359 -11.57552 -11.00346 -10.91698 -10.83414 -10.60773 -10.42060 -10.12224 -9.97060 -9.94712 -9.75373 -9.57023 -8.94345 -8.66717 -6.92628 -5.77738 -3.12207 0.57956 0.89955 1.32319 2.89840 3.37479 3.43171 3.45643 3.49190 3.88317 4.12949 4.44377 4.50219 4.66761 5.04185 5.16489 5.33154 5.46280 5.48481 5.57396 5.63051 5.67149 5.76384 5.95590 6.14821 6.29936 6.36254 6.48165 6.57639 6.63945 7.25654 7.47284 7.49308 7.74438 7.81505 8.17052 9.14418 9.73974 10.37886 11.34253 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.036414 B = 0.003643 C = 0.003466 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 768.743118 B = 7685.114491 C = 8076.563303 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C -0.199 4.199 3 C 0.238 3.762 4 Cl -0.011 7.011 5 N -0.542 5.542 6 C 0.349 3.651 7 N -0.561 5.561 8 C 0.387 3.613 9 O -0.281 6.281 10 C 0.069 3.931 11 H 0.099 0.901 12 C -0.137 4.137 13 C 0.179 3.821 14 N -0.601 5.601 15 C -0.229 4.229 16 H 0.080 0.920 17 C -0.007 4.007 18 N -0.922 5.922 19 Si 0.915 3.085 20 H -0.279 1.279 21 H -0.290 1.290 22 H -0.289 1.289 23 C 0.127 3.873 24 H 0.078 0.922 25 H 0.074 0.926 26 H 0.081 0.919 27 H 0.209 0.791 28 H 0.068 0.932 29 H 0.070 0.930 30 H 0.052 0.948 31 H 0.051 0.949 32 H 0.253 0.747 33 H 0.025 0.975 34 H 0.046 0.954 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.540 17.798 -4.301 18.865 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.206 4.206 3 C 0.068 3.932 4 Cl 0.017 6.983 5 N -0.263 5.263 6 C 0.061 3.939 7 N -0.290 5.290 8 C 0.200 3.800 9 O -0.183 6.183 10 C 0.013 3.987 11 H 0.117 0.883 12 C -0.175 4.175 13 C 0.054 3.946 14 N -0.329 5.329 15 C -0.357 4.357 16 H 0.098 0.902 17 C -0.203 4.203 18 N -0.570 5.570 19 Si 0.745 3.255 20 H -0.204 1.204 21 H -0.217 1.217 22 H -0.216 1.216 23 C 0.000 4.000 24 H 0.097 0.903 25 H 0.092 0.908 26 H 0.100 0.900 27 H 0.225 0.775 28 H 0.087 0.913 29 H 0.089 0.911 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.063 0.937 33 H 0.043 0.957 34 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges -3.909 17.558 -4.279 18.490 hybrid contribution -0.111 -0.503 0.602 0.793 sum -4.020 17.055 -3.678 17.904 Atomic orbital electron populations 1.20600 0.87917 1.03873 1.03406 1.20369 0.99648 0.89793 1.10772 1.21552 0.89690 0.87292 0.94680 1.98411 1.75165 1.28726 1.95959 1.67841 1.07794 1.31667 1.19025 1.24699 1.00795 0.80217 0.88155 1.68232 1.08477 1.31925 1.20414 1.19867 0.87112 0.86879 0.86167 1.86259 1.35577 1.11830 1.84633 1.24071 0.94413 0.80117 1.00141 0.88338 1.23150 1.00059 0.94295 1.00044 1.21206 0.95531 0.90472 0.87345 1.44323 1.60675 1.01804 1.26065 1.19108 1.24392 0.89998 1.02205 0.90232 1.24815 1.00689 0.96633 0.98169 1.69943 1.48433 1.10918 1.27678 0.86003 0.79349 0.80189 0.79969 1.20444 1.21672 1.21640 1.21798 0.98432 0.87276 0.92540 0.90323 0.90764 0.90014 0.77494 0.91291 0.91132 0.92963 0.93081 0.93657 0.95735 0.93550 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.02 9.48 36.00 0.34 -0.67 16 2 C -0.20 -2.54 5.93 -104.17 -0.62 -3.16 16 3 C 0.24 2.96 7.32 -17.15 -0.13 2.83 16 4 Cl -0.01 -0.11 27.64 -51.86 -1.43 -1.55 16 5 N -0.54 -7.01 10.43 -11.74 -0.12 -7.13 16 6 C 0.35 4.33 12.28 -92.19 -1.13 3.19 16 7 N -0.56 -8.37 8.89 -14.66 -0.13 -8.50 16 8 C 0.39 5.82 7.50 -16.72 -0.13 5.69 16 9 O -0.28 -4.57 9.13 -18.26 -0.17 -4.74 16 10 C 0.07 1.26 3.25 -24.43 -0.08 1.18 16 11 H 0.10 1.84 7.20 -51.93 -0.37 1.47 16 12 C -0.14 -2.53 6.70 -24.74 -0.17 -2.70 16 13 C 0.18 4.26 5.38 -3.06 -0.02 4.25 16 14 N -0.60 -15.37 3.39 -170.08 -0.58 -15.95 16 15 C -0.23 -6.37 10.28 -15.06 -0.15 -6.53 16 16 H 0.08 2.15 7.83 -52.48 -0.41 1.74 16 17 C -0.01 -0.19 5.49 -17.43 -0.10 -0.29 16 18 N -0.92 -26.66 10.31 55.49 0.57 -26.09 16 19 Si 0.91 21.92 29.55 -169.99 -5.02 16.89 16 20 H -0.28 -6.51 7.11 56.52 0.40 -6.10 16 21 H -0.29 -6.98 7.11 56.52 0.40 -6.58 16 22 H -0.29 -6.96 7.11 56.52 0.40 -6.56 16 23 C 0.13 2.70 6.96 -2.53 -0.02 2.68 16 24 H 0.08 0.74 8.14 -51.93 -0.42 0.32 16 25 H 0.07 0.63 7.04 -51.93 -0.37 0.26 16 26 H 0.08 0.84 7.63 -51.93 -0.40 0.44 16 27 H 0.21 1.81 8.06 -52.49 -0.42 1.38 16 28 H 0.07 1.13 8.14 -51.93 -0.42 0.71 16 29 H 0.07 1.23 8.14 -51.93 -0.42 0.81 16 30 H 0.05 1.36 7.38 -51.93 -0.38 0.98 16 31 H 0.05 1.33 7.50 -51.93 -0.39 0.94 16 32 H 0.25 7.08 8.31 -40.82 -0.34 6.74 16 33 H 0.03 0.54 8.14 -51.93 -0.42 0.11 16 34 H 0.05 0.99 8.14 -51.93 -0.42 0.57 16 LS Contribution 302.89 15.07 4.56 4.56 Total: -1.00 -30.29 302.89 -8.50 -38.79 By element: Atomic # 1 Polarization: 1.22 SS G_CDS: -3.99 Total: -2.77 kcal Atomic # 6 Polarization: 8.67 SS G_CDS: -2.19 Total: 6.48 kcal Atomic # 7 Polarization: -57.41 SS G_CDS: -0.26 Total: -57.67 kcal Atomic # 8 Polarization: -4.57 SS G_CDS: -0.17 Total: -4.74 kcal Atomic # 14 Polarization: 21.92 SS G_CDS: -5.02 Total: 16.89 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -1.43 Total: -1.55 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -30.29 -8.50 -38.79 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001226077941.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.941 kcal (2) G-P(sol) polarization free energy of solvation -30.288 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.653 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.498 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.785 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.155 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds