Wall clock time and date at job start Tue Mar 31 2020 05:16:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 N 1.31771 * 119.08344 * 2 1 4 4 C 1.32495 * 120.97500 * 179.97438 * 3 2 1 5 5 C 1.38325 * 119.16129 * 359.72395 * 4 3 2 6 6 Cl 1.73604 * 120.83763 * 180.27191 * 5 4 3 7 7 C 1.39475 * 118.32579 * 0.56085 * 5 4 3 8 8 O 1.35544 * 120.51740 * 179.71347 * 7 5 4 9 9 C 1.42906 * 116.99967 * 179.71905 * 8 7 5 10 10 H 1.08997 * 110.88373 * 333.88132 * 9 8 7 11 11 C 1.55156 * 111.00090 * 210.00126 * 9 8 7 12 12 C 1.54327 * 102.94181 * 206.42310 * 11 9 8 13 13 N 1.47031 * 107.26879 * 22.19441 * 12 11 9 14 14 C 1.36938 * 125.64895 * 181.03688 * 13 12 11 15 15 H 1.07997 * 120.00078 * 180.02562 * 14 13 12 16 16 C 1.38808 * 119.99698 * 0.02707 * 14 13 12 17 17 N 1.31619 * 120.00429 * 359.97438 * 16 14 13 18 18 Si 1.86801 * 119.99884 * 179.97438 * 16 14 13 19 19 H 1.48506 * 109.47036 * 359.97438 * 18 16 14 20 20 H 1.48502 * 109.47141 * 119.99507 * 18 16 14 21 21 H 1.48497 * 109.47329 * 239.99887 * 18 16 14 22 22 C 1.47422 * 108.70136 * 1.05978 * 13 12 11 23 23 N 1.31781 * 119.07609 * 180.02562 * 2 1 3 24 24 H 1.09004 * 109.47208 * 269.98316 * 1 2 3 25 25 H 1.09007 * 109.46952 * 29.97623 * 1 2 3 26 26 H 1.09001 * 109.47401 * 149.97812 * 1 2 3 27 27 H 1.08000 * 120.42125 * 179.97438 * 4 3 2 28 28 H 1.09001 * 110.72147 * 88.06245 * 11 9 8 29 29 H 1.08997 * 110.72273 * 324.78476 * 11 9 8 30 30 H 1.08998 * 109.88371 * 141.60876 * 12 11 9 31 31 H 1.08994 * 109.88463 * 262.78171 * 12 11 9 32 32 H 0.97002 * 120.00537 * 180.02562 * 17 16 14 33 33 H 1.09000 * 110.36378 * 217.03375 * 22 13 12 34 34 H 1.09001 * 110.46274 * 94.75551 * 22 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1475 1.1516 0.0000 4 6 3.4717 1.1953 0.0005 5 6 4.1852 0.0103 0.0069 6 17 5.9212 0.0168 0.0149 7 6 3.4748 -1.1900 0.0005 8 8 4.1291 -2.3770 0.0005 9 6 3.3272 -3.5599 0.0000 10 1 2.3522 -3.3684 0.4480 11 6 4.0532 -4.7242 0.7243 12 6 3.4405 -5.9774 0.0642 13 7 2.9055 -5.5654 -1.2419 14 6 2.2606 -6.3807 -2.1334 15 1 1.9037 -5.9803 -3.0708 16 6 2.0656 -7.7216 -1.8321 17 7 2.5010 -8.2096 -0.6899 18 14 1.1854 -8.8335 -3.0479 19 1 0.7977 -8.0475 -4.2467 20 1 2.0902 -9.9396 -3.4519 21 1 -0.0321 -9.3973 -2.4113 22 6 3.1787 -4.1294 -1.4329 23 7 2.1474 -1.1517 -0.0005 24 1 -0.3634 -0.0003 1.0277 25 1 -0.3633 0.8903 -0.5135 26 1 -0.3634 -0.8898 -0.5142 27 1 3.9875 2.1441 0.0001 28 1 3.8386 -4.7073 1.7928 29 1 5.1274 -4.6800 0.5448 30 1 4.2096 -6.7375 -0.0734 31 1 2.6365 -6.3691 0.6872 32 1 2.3651 -9.1467 -0.4795 33 1 2.3458 -3.6499 -1.9472 34 1 4.1022 -3.9886 -1.9947 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001228290461.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:16:01 Heat of formation + Delta-G solvation = 35.339224 kcal Electronic energy + Delta-G solvation = -19843.799773 eV Core-core repulsion = 16611.282052 eV Total energy + Delta-G solvation = -3232.517721 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 283.083 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -41.39113 -38.95971 -36.83830 -36.44739 -33.57951 -32.80430 -32.02322 -29.36111 -28.57229 -27.39093 -25.01235 -23.99270 -22.96940 -20.71594 -20.19923 -18.37917 -18.07005 -16.91877 -16.27817 -16.03412 -15.21970 -14.78286 -14.45638 -14.36734 -13.93040 -13.48959 -13.06728 -12.90028 -12.55222 -12.42129 -12.09607 -11.94676 -11.82374 -11.42744 -11.23511 -10.99341 -10.89250 -10.79154 -10.39719 -10.13050 -9.97593 -9.93859 -9.73638 -9.44953 -8.83569 -8.65538 -6.91346 -5.76545 -3.11073 0.56800 0.94573 1.88676 2.79149 3.38021 3.43564 3.45669 3.46114 3.73247 3.84753 4.42921 4.53673 4.75190 5.01394 5.19306 5.33746 5.39104 5.43210 5.53177 5.61945 5.68026 5.69863 6.00160 6.17803 6.32412 6.38772 6.50371 6.58102 6.68498 7.26315 7.48647 7.51621 7.75603 7.86165 8.18091 9.15489 9.75048 10.39250 11.35444 Molecular weight = 283.08amu Principal moments of inertia in cm(-1) A = 0.023009 B = 0.004377 C = 0.003917 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1216.634551 B = 6395.912595 C = 7145.901830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C 0.361 3.639 3 N -0.537 5.537 4 C 0.190 3.810 5 C -0.182 4.182 6 Cl -0.033 7.033 7 C 0.391 3.609 8 O -0.276 6.276 9 C 0.066 3.934 10 H 0.102 0.898 11 C -0.139 4.139 12 C 0.180 3.820 13 N -0.600 5.600 14 C -0.229 4.229 15 H 0.080 0.920 16 C -0.007 4.007 17 N -0.922 5.922 18 Si 0.914 3.086 19 H -0.279 1.279 20 H -0.290 1.290 21 H -0.290 1.290 22 C 0.129 3.871 23 N -0.556 5.556 24 H 0.090 0.910 25 H 0.089 0.911 26 H 0.091 0.909 27 H 0.180 0.820 28 H 0.068 0.932 29 H 0.070 0.930 30 H 0.051 0.949 31 H 0.052 0.948 32 H 0.253 0.747 33 H 0.045 0.955 34 H 0.027 0.973 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.324 18.165 3.822 18.610 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.094 3.906 3 N -0.257 5.257 4 C 0.026 3.974 5 C -0.215 4.215 6 Cl -0.005 7.005 7 C 0.203 3.797 8 O -0.177 6.177 9 C 0.009 3.991 10 H 0.120 0.880 11 C -0.178 4.178 12 C 0.055 3.945 13 N -0.328 5.328 14 C -0.357 4.357 15 H 0.098 0.902 16 C -0.203 4.203 17 N -0.570 5.570 18 Si 0.745 3.255 19 H -0.205 1.205 20 H -0.217 1.217 21 H -0.217 1.217 22 C 0.002 3.998 23 N -0.287 5.287 24 H 0.109 0.891 25 H 0.108 0.892 26 H 0.110 0.890 27 H 0.197 0.803 28 H 0.087 0.913 29 H 0.089 0.911 30 H 0.069 0.931 31 H 0.070 0.930 32 H 0.063 0.937 33 H 0.063 0.937 34 H 0.044 0.956 Dipole moment (debyes) X Y Z Total from point charges 0.770 17.770 3.804 18.189 hybrid contribution 0.618 -0.759 -0.573 1.134 sum 1.388 17.011 3.232 17.371 Atomic orbital electron populations 1.20653 0.84964 1.04727 1.04286 1.23145 0.98257 0.82155 0.87003 1.68407 1.08468 1.29726 1.19126 1.23069 0.89181 0.96660 0.88473 1.21813 0.88199 0.94069 1.17421 1.98378 1.06244 1.98744 1.97109 1.19948 0.87244 0.86903 0.85638 1.86367 1.35317 1.11847 1.84176 1.24072 0.94963 0.80076 0.99955 0.88029 1.23126 1.00469 0.94935 0.99238 1.21199 0.97167 0.90347 0.85750 1.44320 1.67431 1.02857 1.18210 1.19104 1.29233 0.89879 0.97453 0.90239 1.24811 1.01057 0.96870 0.97543 1.69947 1.50941 1.13572 1.22517 0.86008 0.78902 0.80610 0.80019 1.20452 1.21664 1.21653 1.21762 0.98516 0.86977 0.92591 1.68167 1.07152 1.31679 1.21728 0.89144 0.89210 0.88979 0.80290 0.91343 0.91105 0.93130 0.92954 0.93659 0.93722 0.95558 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.83 10.32 36.00 0.37 -0.46 16 2 C 0.36 4.71 7.64 -157.23 -1.20 3.51 16 3 N -0.54 -6.62 10.33 -10.77 -0.11 -6.73 16 4 C 0.19 2.11 11.11 -17.23 -0.19 1.92 16 5 C -0.18 -2.40 6.38 -39.09 -0.25 -2.65 16 6 Cl -0.03 -0.40 28.64 -51.86 -1.49 -1.89 16 7 C 0.39 6.17 7.52 -16.67 -0.13 6.04 16 8 O -0.28 -4.80 9.50 -18.33 -0.17 -4.98 16 9 C 0.07 1.25 3.37 -24.58 -0.08 1.16 16 10 H 0.10 1.96 6.98 -51.93 -0.36 1.59 16 11 C -0.14 -2.68 6.69 -24.90 -0.17 -2.85 16 12 C 0.18 4.36 5.37 -3.06 -0.02 4.35 16 13 N -0.60 -15.54 3.39 -170.07 -0.58 -16.11 16 14 C -0.23 -6.40 10.28 -15.06 -0.15 -6.56 16 15 H 0.08 2.16 7.83 -52.49 -0.41 1.75 16 16 C -0.01 -0.18 5.49 -17.43 -0.10 -0.28 16 17 N -0.92 -26.86 10.31 55.49 0.57 -26.29 16 18 Si 0.91 22.01 29.55 -169.99 -5.02 16.98 16 19 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 20 H -0.29 -7.01 7.11 56.52 0.40 -6.61 16 21 H -0.29 -6.99 7.11 56.52 0.40 -6.58 16 22 C 0.13 2.81 6.97 -2.53 -0.02 2.79 16 23 N -0.56 -8.62 8.69 -10.76 -0.09 -8.72 16 24 H 0.09 0.73 8.14 -51.93 -0.42 0.30 16 25 H 0.09 0.70 8.14 -51.93 -0.42 0.28 16 26 H 0.09 0.89 8.14 -51.93 -0.42 0.47 16 27 H 0.18 1.33 8.06 -52.49 -0.42 0.91 16 28 H 0.07 1.17 8.14 -51.93 -0.42 0.75 16 29 H 0.07 1.31 8.14 -51.93 -0.42 0.88 16 30 H 0.05 1.34 7.51 -51.93 -0.39 0.95 16 31 H 0.05 1.38 7.38 -51.93 -0.38 1.00 16 32 H 0.25 7.13 8.31 -40.82 -0.34 6.79 16 33 H 0.04 0.97 8.14 -51.93 -0.42 0.55 16 34 H 0.03 0.59 8.14 -51.93 -0.42 0.17 16 LS Contribution 305.93 15.07 4.61 4.61 Total: -1.00 -30.81 305.93 -8.28 -39.09 By element: Atomic # 1 Polarization: 1.12 SS G_CDS: -4.06 Total: -2.94 kcal Atomic # 6 Polarization: 8.91 SS G_CDS: -1.93 Total: 6.98 kcal Atomic # 7 Polarization: -57.64 SS G_CDS: -0.21 Total: -57.85 kcal Atomic # 8 Polarization: -4.80 SS G_CDS: -0.17 Total: -4.98 kcal Atomic # 14 Polarization: 22.01 SS G_CDS: -5.02 Total: 16.98 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -1.49 Total: -1.89 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -30.81 -8.28 -39.09 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001228290461.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 74.428 kcal (2) G-P(sol) polarization free energy of solvation -30.812 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.276 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.088 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.339 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds