Wall clock time and date at job start Tue Mar 31 2020 06:11:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.35377 * 126.13402 * 2 1 4 4 Cl 1.73601 * 126.04704 * 359.97438 * 3 2 1 5 5 C 1.39931 * 107.90490 * 180.26864 * 3 2 1 6 6 N 1.30843 * 108.21522 * 359.61575 * 5 3 2 7 7 N 1.35040 * 126.14014 * 180.02562 * 2 1 3 8 8 C 1.46508 * 126.03523 * 359.92504 * 7 2 1 9 9 N 1.46498 * 109.47003 * 89.99840 * 8 7 2 10 10 C 1.36942 * 120.00083 * 93.70004 * 9 8 7 11 11 H 1.07995 * 120.00272 * 217.94236 * 10 9 8 12 12 C 1.38808 * 119.99872 * 37.93712 * 10 9 8 13 13 N 1.31625 * 120.00259 * 213.44811 * 12 10 9 14 14 Si 1.86807 * 119.99911 * 33.44917 * 12 10 9 15 15 H 1.48499 * 109.46925 * 93.67713 * 14 12 10 16 16 H 1.48504 * 109.46780 * 213.67482 * 14 12 10 17 17 H 1.48496 * 109.46947 * 333.67389 * 14 12 10 18 18 C 1.46500 * 120.00137 * 273.69957 * 9 8 7 19 19 C 1.54269 * 110.02956 * 233.37916 * 18 9 8 20 20 C 1.54967 * 104.16113 * 217.13262 * 19 18 9 21 21 C 1.54890 * 102.77209 * 37.89409 * 20 19 18 22 22 C 1.53873 * 110.03462 * 116.16652 * 18 9 8 23 23 H 1.08994 * 109.47456 * 89.97513 * 1 2 3 24 24 H 1.09009 * 109.46815 * 209.97630 * 1 2 3 25 25 H 1.09000 * 109.47207 * 329.96729 * 1 2 3 26 26 H 1.08004 * 125.88716 * 179.77035 * 5 3 2 27 27 H 1.08995 * 109.47151 * 209.99611 * 8 7 2 28 28 H 1.08998 * 109.46679 * 330.00105 * 8 7 2 29 29 H 0.96994 * 120.00189 * 179.97438 * 13 12 10 30 30 H 1.08997 * 110.01588 * 354.76809 * 18 9 8 31 31 H 1.08993 * 110.48921 * 335.78458 * 19 18 9 32 32 H 1.09006 * 110.48191 * 98.42585 * 19 18 9 33 33 H 1.08999 * 110.72252 * 279.57706 * 20 19 18 34 34 H 1.08999 * 110.92206 * 156.29536 * 20 19 18 35 35 H 1.09004 * 110.48219 * 203.40560 * 21 20 19 36 36 H 1.08994 * 110.60149 * 80.81987 * 21 20 19 37 37 H 1.09002 * 110.03449 * 238.57157 * 22 18 9 38 38 H 1.09008 * 110.03353 * 359.97438 * 22 18 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3053 1.0934 0.0000 4 17 1.7740 2.7461 -0.0006 5 6 3.6343 0.6556 -0.0062 6 7 3.6341 -0.6528 -0.0015 7 7 2.3034 -1.0905 -0.0005 8 6 1.8549 -2.4853 0.0004 9 7 1.7040 -2.9506 -1.3805 10 6 2.7380 -3.5990 -2.0014 11 1 2.9372 -3.4199 -3.0476 12 6 3.5302 -4.4864 -1.2861 13 7 4.8091 -4.6061 -1.5737 14 14 2.7814 -5.5109 0.0848 15 1 2.3619 -6.8291 -0.4550 16 1 3.7878 -5.7128 1.1580 17 1 1.5993 -4.8049 0.6411 18 6 0.4468 -2.7222 -2.0971 19 6 -0.0872 -4.0536 -2.6647 20 6 -0.6985 -3.6638 -4.0344 21 6 0.2918 -2.5948 -4.5595 22 6 0.6873 -1.7949 -3.3012 23 1 -0.3634 0.0004 -1.0276 24 1 -0.3633 -0.8903 0.5135 25 1 -0.3633 0.8897 0.5143 26 1 4.5094 1.2887 -0.0113 27 1 2.5915 -3.1034 0.5136 28 1 0.8970 -2.5585 0.5153 29 1 5.3627 -5.2259 -1.0736 30 1 -0.2899 -2.2801 -1.4265 31 1 0.7275 -4.7650 -2.7994 32 1 -0.8526 -4.4683 -2.0086 33 1 -1.6937 -3.2384 -3.9055 34 1 -0.7310 -4.5227 -4.7047 35 1 -0.1974 -1.9459 -5.2859 36 1 1.1682 -3.0683 -5.0018 37 1 0.0667 -0.9029 -3.2154 38 1 1.7394 -1.5143 -3.3521 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000156708145.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:11:52 Heat of formation + Delta-G solvation = 84.690348 kcal Electronic energy + Delta-G solvation = -21274.389190 eV Core-core repulsion = 18179.844589 eV Total energy + Delta-G solvation = -3094.544601 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 283.115 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.62314 -38.04730 -35.97900 -34.75442 -32.44050 -31.60815 -30.43424 -28.08208 -27.20804 -26.45617 -25.56107 -22.74086 -20.66669 -20.11808 -19.50123 -19.19764 -17.10824 -16.15139 -15.57907 -15.28209 -14.85322 -14.32351 -14.20647 -13.70700 -13.45036 -12.98873 -12.94236 -12.70173 -12.52860 -12.34978 -11.99235 -11.54973 -11.29003 -11.19791 -10.85543 -10.79059 -10.67991 -10.59317 -10.54648 -10.49767 -10.10668 -9.94975 -9.83832 -9.74705 -8.72365 -8.65923 -7.76794 -7.24365 -6.26895 -3.60674 2.36237 2.60371 3.16823 3.22420 3.30322 3.35238 3.48358 4.32508 4.63898 5.00271 5.03571 5.20069 5.23058 5.25379 5.34201 5.47559 5.58302 5.70525 5.80769 5.95227 6.03555 6.06877 6.12308 6.15267 6.23674 6.24008 6.38466 6.40691 6.42382 6.57766 6.77633 6.97112 7.01205 7.03300 7.61217 7.78786 8.19693 8.36748 8.71497 9.46310 9.81132 10.86823 Molecular weight = 283.11amu Principal moments of inertia in cm(-1) A = 0.015137 B = 0.007555 C = 0.005847 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1849.319408 B = 3705.362050 C = 4787.246300 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C 0.088 3.912 3 C -0.200 4.200 4 Cl -0.072 7.072 5 C 0.037 3.963 6 N -0.256 5.256 7 N -0.342 5.342 8 C 0.355 3.645 9 N -0.565 5.565 10 C -0.285 4.285 11 H 0.081 0.919 12 C 0.060 3.940 13 N -0.854 5.854 14 Si 0.845 3.155 15 H -0.283 1.283 16 H -0.289 1.289 17 H -0.268 1.268 18 C 0.163 3.837 19 C -0.132 4.132 20 C -0.121 4.121 21 C -0.117 4.117 22 C -0.132 4.132 23 H 0.080 0.920 24 H 0.068 0.932 25 H 0.079 0.921 26 H 0.176 0.824 27 H 0.093 0.907 28 H 0.075 0.925 29 H 0.267 0.733 30 H 0.054 0.946 31 H 0.090 0.910 32 H 0.050 0.950 33 H 0.055 0.945 34 H 0.058 0.942 35 H 0.050 0.950 36 H 0.065 0.935 37 H 0.046 0.954 38 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.516 7.049 1.554 12.755 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.044 4.044 3 C -0.239 4.239 4 Cl -0.045 7.045 5 C -0.149 4.149 6 N -0.077 5.077 7 N -0.132 5.132 8 C 0.149 3.851 9 N -0.284 5.284 10 C -0.413 4.413 11 H 0.098 0.902 12 C -0.145 4.145 13 N -0.490 5.490 14 Si 0.671 3.329 15 H -0.210 1.210 16 H -0.216 1.216 17 H -0.193 1.193 18 C 0.057 3.943 19 C -0.171 4.171 20 C -0.159 4.159 21 C -0.155 4.155 22 C -0.171 4.171 23 H 0.098 0.902 24 H 0.087 0.913 25 H 0.098 0.902 26 H 0.193 0.807 27 H 0.110 0.890 28 H 0.093 0.907 29 H 0.077 0.923 30 H 0.072 0.928 31 H 0.108 0.892 32 H 0.069 0.931 33 H 0.074 0.926 34 H 0.076 0.924 35 H 0.069 0.931 36 H 0.083 0.917 37 H 0.065 0.935 38 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -9.689 5.781 1.556 11.389 hybrid contribution -0.687 0.324 0.671 1.013 sum -10.375 6.105 2.227 12.242 Atomic orbital electron populations 1.20445 0.87917 1.03135 1.03248 1.20756 0.94515 0.87720 1.01431 1.20517 0.93361 0.84695 1.25362 1.98251 1.90496 1.17632 1.98085 1.23650 0.95900 0.92738 1.02635 1.77688 0.99010 1.10483 1.20562 1.51628 1.02524 1.07081 1.51974 1.22461 0.97840 0.76179 0.88645 1.44864 1.11841 1.60049 1.11637 1.18439 1.06180 1.19606 0.97107 0.90190 1.25432 0.94721 0.97497 0.96873 1.70073 1.03683 1.34121 1.41104 0.87319 0.80075 0.82615 0.82879 1.21001 1.21565 1.19287 1.21284 0.86559 0.93834 0.92610 1.22754 1.00087 0.99251 0.95012 1.22420 0.97840 0.98317 0.97320 1.22248 0.98836 0.97204 0.97205 1.22558 1.02024 0.97355 0.95161 0.90182 0.91329 0.90178 0.80739 0.88957 0.90688 0.92268 0.92763 0.89164 0.93126 0.92582 0.92364 0.93076 0.91657 0.93501 0.90829 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.18 9.16 36.01 0.33 -0.85 16 2 C 0.09 1.52 6.94 -82.20 -0.57 0.95 16 3 C -0.20 -3.46 6.64 -39.97 -0.27 -3.73 16 4 Cl -0.07 -1.05 28.88 -51.86 -1.50 -2.55 16 5 C 0.04 0.70 12.02 -17.34 -0.21 0.49 16 6 N -0.26 -5.66 12.57 30.64 0.39 -5.27 16 7 N -0.34 -6.95 3.85 -60.27 -0.23 -7.18 16 8 C 0.35 7.29 5.05 -63.74 -0.32 6.97 16 9 N -0.57 -12.09 2.20 -168.07 -0.37 -12.46 16 10 C -0.29 -7.27 7.81 -15.06 -0.12 -7.38 16 11 H 0.08 2.27 7.65 -52.49 -0.40 1.87 16 12 C 0.06 1.60 5.01 -17.43 -0.09 1.52 16 13 N -0.85 -24.55 13.97 55.49 0.78 -23.78 16 14 Si 0.85 19.76 26.35 -169.99 -4.48 15.28 16 15 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 16 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 17 H -0.27 -5.77 5.90 56.52 0.33 -5.43 16 18 C 0.16 2.91 3.43 -66.81 -0.23 2.68 16 19 C -0.13 -2.24 6.40 -25.03 -0.16 -2.40 16 20 C -0.12 -1.75 6.91 -24.70 -0.17 -1.92 16 21 C -0.12 -1.83 6.83 -25.07 -0.17 -2.00 16 22 C -0.13 -2.29 6.22 -25.61 -0.16 -2.45 16 23 H 0.08 1.02 7.95 -51.93 -0.41 0.61 16 24 H 0.07 0.83 7.07 -51.92 -0.37 0.46 16 25 H 0.08 0.93 7.91 -51.93 -0.41 0.52 16 26 H 0.18 2.73 8.06 -52.48 -0.42 2.31 16 27 H 0.09 2.11 4.61 -51.93 -0.24 1.87 16 28 H 0.08 1.32 6.89 -51.93 -0.36 0.96 16 29 H 0.27 7.30 8.31 -40.82 -0.34 6.96 16 30 H 0.05 0.86 6.81 -51.93 -0.35 0.51 16 31 H 0.09 1.80 6.86 -51.93 -0.36 1.44 16 32 H 0.05 0.78 8.14 -51.93 -0.42 0.36 16 33 H 0.06 0.71 8.14 -51.93 -0.42 0.29 16 34 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 35 H 0.05 0.70 8.14 -51.93 -0.42 0.28 16 36 H 0.06 1.12 8.14 -51.93 -0.42 0.70 16 37 H 0.05 0.73 8.14 -51.93 -0.42 0.31 16 38 H 0.07 1.56 7.31 -51.92 -0.38 1.18 16 LS Contribution 318.62 15.07 4.80 4.80 Total: -1.00 -28.43 318.62 -8.19 -36.62 By element: Atomic # 1 Polarization: 8.12 SS G_CDS: -5.44 Total: 2.68 kcal Atomic # 6 Polarization: -6.00 SS G_CDS: -2.13 Total: -8.13 kcal Atomic # 7 Polarization: -49.25 SS G_CDS: 0.56 Total: -48.69 kcal Atomic # 14 Polarization: 19.76 SS G_CDS: -4.48 Total: 15.28 kcal Atomic # 17 Polarization: -1.05 SS G_CDS: -1.50 Total: -2.55 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -28.43 -8.19 -36.62 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000156708145.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 121.309 kcal (2) G-P(sol) polarization free energy of solvation -28.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.879 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.188 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.619 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.690 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds