Wall clock time and date at job start Tue Mar 31 2020 06:11:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35365 * 126.13526 * 2 1 4 4 Cl 1.73604 * 126.04968 * 359.97438 * 3 2 1 5 5 C 1.39927 * 107.90962 * 180.02562 * 3 2 1 6 6 N 1.30853 * 108.20899 * 359.75818 * 5 3 2 7 7 N 1.35043 * 126.13476 * 180.02562 * 2 1 3 8 8 C 1.46500 * 126.03784 * 359.93436 * 7 2 1 9 9 N 1.46907 * 109.46769 * 90.00283 * 8 7 2 10 10 C 1.46842 * 110.99676 * 66.04810 * 9 8 7 11 11 C 1.53036 * 109.52190 * 185.84074 * 10 9 8 12 12 C 1.53123 * 109.27788 * 300.81892 * 11 10 9 13 13 C 1.53123 * 109.16001 * 57.65365 * 12 11 10 14 14 H 1.08998 * 109.53365 * 62.30832 * 13 12 11 15 15 C 1.50697 * 109.50101 * 182.40587 * 13 12 11 16 16 H 1.07998 * 119.99675 * 119.80966 * 15 13 12 17 17 C 1.37883 * 120.00267 * 299.80295 * 15 13 12 18 18 N 1.31512 * 119.99590 * 0.02562 * 17 15 13 19 19 Si 1.86793 * 120.00229 * 180.02562 * 17 15 13 20 20 H 1.48506 * 109.46850 * 359.97438 * 19 17 15 21 21 H 1.48490 * 109.47349 * 119.99724 * 19 17 15 22 22 H 1.48502 * 109.46891 * 240.00154 * 19 17 15 23 23 C 1.46848 * 110.99958 * 190.25872 * 9 8 7 24 24 H 1.09005 * 109.47244 * 269.97431 * 1 2 3 25 25 H 1.08998 * 109.46885 * 29.96907 * 1 2 3 26 26 H 1.09002 * 109.47182 * 149.97634 * 1 2 3 27 27 H 1.07999 * 125.90139 * 179.97438 * 5 3 2 28 28 H 1.09004 * 109.47283 * 330.01056 * 8 7 2 29 29 H 1.08994 * 109.47540 * 210.00411 * 8 7 2 30 30 H 1.09002 * 109.46766 * 65.82407 * 10 9 8 31 31 H 1.09000 * 109.46420 * 305.85141 * 10 9 8 32 32 H 1.09000 * 109.50632 * 60.76184 * 11 10 9 33 33 H 1.09006 * 109.50216 * 180.87978 * 11 10 9 34 34 H 1.09000 * 109.52561 * 177.56017 * 12 11 10 35 35 H 1.09007 * 109.52268 * 297.75177 * 12 11 10 36 36 H 0.97005 * 119.99751 * 180.02562 * 18 17 15 37 37 H 1.09003 * 109.46014 * 294.17985 * 23 9 8 38 38 H 1.08995 * 109.46374 * 54.14015 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3053 1.0932 0.0000 4 17 1.7741 2.7460 -0.0006 5 6 3.6343 0.6556 -0.0006 6 7 3.6340 -0.6529 0.0043 7 7 2.3034 -1.0907 -0.0005 8 6 1.8549 -2.4853 0.0002 9 7 1.7037 -2.9517 -1.3846 10 6 3.0028 -3.0029 -2.0673 11 6 2.7919 -3.3509 -3.5426 12 6 2.0860 -4.7057 -3.6465 13 6 0.7583 -4.6402 -2.8864 14 1 0.1114 -3.8934 -3.3466 15 6 0.0846 -5.9874 -2.9338 16 1 -0.1300 -6.5163 -2.0170 17 6 -0.2580 -6.5447 -4.1476 18 7 0.0038 -5.9007 -5.2640 19 14 -1.0937 -8.2142 -4.2063 20 1 -1.2746 -8.7259 -2.8239 21 1 -2.4189 -8.0816 -4.8629 22 1 -0.2513 -9.1625 -4.9784 23 6 1.0282 -4.2548 -1.4302 24 1 -0.3634 -0.0005 1.0277 25 1 -0.3633 0.8903 -0.5134 26 1 -0.3634 -0.8898 -0.5142 27 1 4.5095 1.2885 -0.0011 28 1 0.8967 -2.5586 0.5148 29 1 2.5912 -3.1036 0.5136 30 1 3.6287 -3.7635 -1.6006 31 1 3.4924 -2.0321 -1.9896 32 1 2.1775 -2.5834 -4.0133 33 1 3.7575 -3.4041 -4.0455 34 1 1.8949 -4.9375 -4.6943 35 1 2.7175 -5.4799 -3.2105 36 1 -0.2376 -6.2926 -6.1179 37 1 1.6633 -5.0096 -0.9665 38 1 0.0837 -4.1934 -0.8897 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000853524811.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:11:45 Heat of formation + Delta-G solvation = 67.594499 kcal Electronic energy + Delta-G solvation = -20400.789376 eV Core-core repulsion = 17305.503443 eV Total energy + Delta-G solvation = -3095.285933 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 283.115 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.33658 -38.26905 -36.38477 -34.30035 -32.80618 -31.95987 -30.60724 -29.81104 -26.95243 -25.73657 -25.01647 -22.33461 -21.58671 -21.19362 -19.69490 -18.72919 -16.93727 -16.54175 -15.80559 -15.10843 -14.76764 -14.38086 -14.33000 -13.92734 -13.57409 -13.30836 -13.02392 -12.82917 -12.54830 -12.35402 -12.19246 -11.96626 -11.77470 -11.53889 -11.27982 -11.01983 -10.78883 -10.72293 -10.47612 -10.16010 -9.92618 -9.58446 -9.55264 -9.11803 -8.79377 -8.42335 -8.35290 -7.94867 -6.04231 -4.11277 1.70945 2.01833 2.59086 2.81314 3.25746 3.34306 3.36959 4.22264 4.42145 4.51930 4.62290 4.96203 5.18154 5.25996 5.26296 5.43747 5.47527 5.63899 5.73448 5.81500 5.92763 5.99714 6.15230 6.19888 6.36646 6.39816 6.61093 6.65569 6.78850 6.80637 7.12893 7.22190 7.48196 7.52928 7.61894 7.69374 7.97099 8.08676 8.37734 8.92588 9.53715 11.01737 Molecular weight = 283.11amu Principal moments of inertia in cm(-1) A = 0.032024 B = 0.003755 C = 0.003650 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 874.128089 B = 7455.038889 C = 7669.581145 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.125 3.875 3 C -0.200 4.200 4 Cl -0.052 7.052 5 C 0.063 3.937 6 N -0.285 5.285 7 N -0.348 5.348 8 C 0.297 3.703 9 N -0.551 5.551 10 C 0.063 3.937 11 C -0.116 4.116 12 C -0.111 4.111 13 C 0.057 3.943 14 H 0.035 0.965 15 C -0.517 4.517 16 H 0.055 0.945 17 C 0.064 3.936 18 N -0.886 5.886 19 Si 0.891 3.109 20 H -0.274 1.274 21 H -0.284 1.284 22 H -0.284 1.284 23 C 0.072 3.928 24 H 0.081 0.919 25 H 0.087 0.913 26 H 0.087 0.913 27 H 0.187 0.813 28 H 0.106 0.894 29 H 0.067 0.933 30 H 0.027 0.973 31 H 0.065 0.935 32 H 0.059 0.941 33 H 0.048 0.952 34 H 0.092 0.908 35 H 0.031 0.969 36 H 0.260 0.740 37 H 0.026 0.974 38 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.440 12.194 10.516 16.466 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C -0.005 4.005 3 C -0.239 4.239 4 Cl -0.024 7.024 5 C -0.124 4.124 6 N -0.105 5.105 7 N -0.131 5.131 8 C 0.086 3.914 9 N -0.278 5.278 10 C -0.064 4.064 11 C -0.154 4.154 12 C -0.149 4.149 13 C 0.038 3.962 14 H 0.053 0.947 15 C -0.556 4.556 16 H 0.073 0.927 17 C -0.138 4.138 18 N -0.525 5.525 19 Si 0.719 3.281 20 H -0.198 1.198 21 H -0.210 1.210 22 H -0.211 1.211 23 C -0.055 4.055 24 H 0.099 0.901 25 H 0.106 0.894 26 H 0.106 0.894 27 H 0.204 0.796 28 H 0.124 0.876 29 H 0.085 0.915 30 H 0.045 0.955 31 H 0.084 0.916 32 H 0.078 0.922 33 H 0.066 0.934 34 H 0.110 0.890 35 H 0.050 0.950 36 H 0.070 0.930 37 H 0.045 0.955 38 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 3.762 11.401 10.086 15.680 hybrid contribution -0.334 -0.563 0.250 0.701 sum 3.428 10.838 10.335 15.364 Atomic orbital electron populations 1.20556 0.86582 1.05153 1.03402 1.20745 0.95007 0.86306 0.98493 1.20403 0.93226 0.85971 1.24273 1.98295 1.90325 1.15836 1.97947 1.23741 0.96524 0.92112 1.00029 1.77461 0.97428 1.11638 1.23999 1.48578 1.03266 1.05959 1.55346 1.22160 0.99819 0.76551 0.92822 1.61990 1.22698 1.31127 1.11968 1.22075 0.88635 0.99815 0.95889 1.21668 0.99619 1.00521 0.93550 1.21674 0.96460 0.92179 1.04599 1.18661 0.93550 0.96308 0.87639 0.94651 1.21135 1.38727 1.03242 0.92496 0.92690 1.24933 0.95652 0.97465 0.95714 1.69901 1.47155 1.37980 0.97444 0.86556 0.79274 0.84213 0.78055 1.19834 1.20996 1.21066 1.22328 0.96144 0.84660 1.02324 0.90052 0.89420 0.89449 0.79645 0.87646 0.91484 0.95506 0.91624 0.92239 0.93375 0.88993 0.95027 0.93012 0.95521 0.91790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.05 9.73 36.01 0.35 -0.70 16 2 C 0.12 1.66 6.94 -82.20 -0.57 1.09 16 3 C -0.20 -2.59 6.64 -39.97 -0.27 -2.86 16 4 Cl -0.05 -0.59 28.87 -51.86 -1.50 -2.08 16 5 C 0.06 0.81 12.02 -17.34 -0.21 0.60 16 6 N -0.28 -4.28 11.45 30.64 0.35 -3.93 16 7 N -0.35 -5.06 3.33 -60.09 -0.20 -5.26 16 8 C 0.30 4.23 5.77 -63.31 -0.37 3.87 16 9 N -0.55 -9.59 4.79 -238.58 -1.14 -10.73 16 10 C 0.06 1.15 5.38 -3.84 -0.02 1.13 16 11 C -0.12 -2.29 6.09 -26.65 -0.16 -2.45 16 12 C -0.11 -2.57 5.03 -26.60 -0.13 -2.70 16 13 C 0.06 1.36 2.26 -91.69 -0.21 1.16 16 14 H 0.04 0.94 8.14 -51.93 -0.42 0.52 16 15 C -0.52 -13.57 8.56 -34.44 -0.29 -13.86 16 16 H 0.05 1.42 7.74 -52.49 -0.41 1.01 16 17 C 0.06 1.72 5.30 -17.82 -0.09 1.62 16 18 N -0.89 -24.70 11.36 55.43 0.63 -24.07 16 19 Si 0.89 20.66 29.54 -169.99 -5.02 15.64 16 20 H -0.27 -6.24 7.11 56.52 0.40 -5.84 16 21 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 22 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 23 C 0.07 1.39 4.68 -3.84 -0.02 1.38 16 24 H 0.08 0.70 8.14 -51.93 -0.42 0.28 16 25 H 0.09 0.88 7.91 -51.93 -0.41 0.46 16 26 H 0.09 1.00 7.73 -51.93 -0.40 0.60 16 27 H 0.19 1.81 8.06 -52.49 -0.42 1.39 16 28 H 0.11 1.26 7.50 -51.93 -0.39 0.87 16 29 H 0.07 0.94 8.12 -51.93 -0.42 0.52 16 30 H 0.03 0.49 8.14 -51.93 -0.42 0.06 16 31 H 0.07 1.19 6.55 -51.93 -0.34 0.85 16 32 H 0.06 1.24 8.14 -51.93 -0.42 0.81 16 33 H 0.05 0.88 8.14 -51.93 -0.42 0.45 16 34 H 0.09 2.40 6.16 -51.93 -0.32 2.08 16 35 H 0.03 0.73 8.14 -51.93 -0.42 0.31 16 36 H 0.26 6.92 8.31 -40.82 -0.34 6.58 16 37 H 0.03 0.52 8.14 -51.93 -0.42 0.10 16 38 H 0.06 1.16 8.01 -51.93 -0.42 0.75 16 LS Contribution 322.15 15.07 4.85 4.85 Total: -1.00 -28.26 322.15 -9.64 -37.90 By element: Atomic # 1 Polarization: 5.04 SS G_CDS: -5.62 Total: -0.58 kcal Atomic # 6 Polarization: -9.75 SS G_CDS: -1.99 Total: -11.74 kcal Atomic # 7 Polarization: -43.63 SS G_CDS: -0.36 Total: -43.99 kcal Atomic # 14 Polarization: 20.66 SS G_CDS: -5.02 Total: 15.64 kcal Atomic # 17 Polarization: -0.59 SS G_CDS: -1.50 Total: -2.08 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -28.26 -9.64 -37.90 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000853524811.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.496 kcal (2) G-P(sol) polarization free energy of solvation -28.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.234 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.902 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.594 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds