Wall clock time and date at job start Tue Mar 31 2020 05:40:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.36878 * 126.39708 * 2 1 4 4 Cl 1.73596 * 126.60078 * 359.70395 * 3 2 1 5 5 C 1.34800 * 106.79994 * 179.74338 * 3 2 1 6 6 N 1.34158 * 108.01480 * 359.97438 * 5 3 2 7 7 C 1.30473 * 109.27274 * 359.97438 * 6 5 3 8 8 C 1.50705 * 125.64360 * 180.02562 * 7 6 5 9 9 N 1.46905 * 109.46953 * 269.97608 * 8 7 6 10 10 C 1.46900 * 110.99601 * 170.00117 * 9 8 7 11 11 C 1.50702 * 109.47188 * 284.38982 * 10 9 8 12 12 H 1.08003 * 120.00232 * 4.78830 * 11 10 9 13 13 C 1.37883 * 119.99971 * 184.79261 * 11 10 9 14 14 N 1.31511 * 119.99982 * 359.97438 * 13 11 10 15 15 Si 1.86797 * 119.99707 * 180.02562 * 13 11 10 16 16 H 1.48495 * 109.47600 * 359.97438 * 15 13 11 17 17 H 1.48503 * 109.47242 * 120.00293 * 15 13 11 18 18 H 1.48511 * 109.46812 * 239.99539 * 15 13 11 19 19 C 1.46892 * 111.00151 * 293.95612 * 9 8 7 20 20 C 1.53011 * 109.46822 * 166.73743 * 19 9 8 21 21 C 1.52999 * 117.49621 * 244.99770 * 20 19 9 22 22 C 1.52996 * 117.49467 * 176.34024 * 20 19 9 23 23 H 1.09002 * 109.47449 * 90.02836 * 1 2 3 24 24 H 1.09006 * 109.47177 * 210.02625 * 1 2 3 25 25 H 1.09000 * 109.47096 * 330.02197 * 1 2 3 26 26 H 1.08003 * 125.98948 * 179.97438 * 5 3 2 27 27 H 1.08999 * 109.46831 * 29.98037 * 8 7 6 28 28 H 1.08997 * 109.46687 * 149.97916 * 8 7 6 29 29 H 1.09003 * 109.47155 * 44.39000 * 10 9 8 30 30 H 1.09002 * 109.46908 * 164.39081 * 10 9 8 31 31 H 0.97000 * 120.00075 * 180.02562 * 14 13 11 32 32 H 1.08996 * 109.47326 * 286.73814 * 19 9 8 33 33 H 1.09000 * 109.47314 * 46.73699 * 19 9 8 34 34 H 1.08993 * 115.54701 * 30.66897 * 20 19 9 35 35 H 1.09006 * 117.49874 * 0.02562 * 21 20 19 36 36 H 1.08996 * 117.49944 * 145.01826 * 21 20 19 37 37 H 1.09000 * 117.50067 * 214.97325 * 22 20 19 38 38 H 1.08997 * 117.50494 * 359.97438 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2772 1.1018 0.0000 4 17 1.7696 2.7618 -0.0072 5 6 3.5471 0.6496 0.0058 6 7 3.5101 -0.6914 0.0098 7 6 2.2670 -1.0879 0.0073 8 6 1.8025 -2.5215 0.0108 9 7 1.6554 -2.9920 -1.3731 10 6 1.4354 -4.4438 -1.4149 11 6 2.7368 -5.1569 -1.1520 12 1 3.6204 -4.5911 -0.8956 13 6 2.7995 -6.5315 -1.2388 14 7 1.7236 -7.2205 -1.5506 15 14 4.4125 -7.4153 -0.9122 16 1 5.4645 -6.4202 -0.5831 17 1 4.2420 -8.3515 0.2278 18 1 4.8134 -8.1770 -2.1224 19 6 0.5728 -2.2755 -2.0604 20 6 0.6596 -2.5419 -3.5647 21 6 0.9716 -1.3530 -4.4757 22 6 -0.4377 -1.9498 -4.4513 23 1 -0.3634 -0.0005 -1.0277 24 1 -0.3634 -0.8898 0.5143 25 1 -0.3633 0.8902 0.5135 26 1 4.4381 1.2600 0.0070 27 1 2.5357 -3.1397 0.5288 28 1 0.8425 -2.5910 0.5222 29 1 0.7077 -4.7232 -0.6529 30 1 1.0587 -4.7261 -2.3980 31 1 1.7676 -8.1876 -1.6113 32 1 -0.3893 -2.6238 -1.6847 33 1 0.6697 -1.2059 -1.8746 34 1 1.0660 -3.5129 -3.8474 35 1 1.1155 -0.3811 -4.0034 36 1 1.5830 -1.5419 -5.3581 37 1 -0.7530 -2.5311 -5.3178 38 1 -1.2217 -1.3710 -3.9631 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000081044201.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:40:26 Heat of formation + Delta-G solvation = 92.978066 kcal Electronic energy + Delta-G solvation = -20482.718997 eV Core-core repulsion = 17388.533778 eV Total energy + Delta-G solvation = -3094.185219 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 283.115 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -42.08077 -37.88429 -36.80041 -35.59609 -34.07354 -32.55239 -30.09943 -27.75870 -27.27927 -26.31005 -23.91947 -22.12880 -21.53441 -21.39932 -19.98558 -19.21624 -17.26209 -16.67807 -16.01315 -15.41223 -15.15491 -14.76970 -14.40214 -14.03973 -13.71456 -13.44000 -13.28340 -12.86339 -12.77623 -12.46085 -12.03261 -11.86698 -11.58471 -11.40447 -11.30565 -11.28615 -10.85344 -10.62395 -10.55454 -10.04045 -9.81705 -9.76442 -9.58358 -9.57192 -9.23229 -8.42540 -8.18741 -7.38389 -6.02146 -4.02802 1.61742 1.90703 2.92541 3.20529 3.34392 3.42323 3.49939 4.10887 4.45639 4.56934 4.64041 4.76968 4.93472 5.06791 5.15371 5.22873 5.26032 5.33893 5.48249 5.50916 5.73974 5.79345 5.83720 5.95878 6.05775 6.14488 6.17625 6.30059 6.35096 6.58871 6.72591 7.06515 7.14188 7.21644 7.80968 7.99857 8.09841 8.19722 8.47540 9.06710 9.62031 11.08333 Molecular weight = 283.11amu Principal moments of inertia in cm(-1) A = 0.017192 B = 0.005150 C = 0.004335 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1628.310429 B = 5435.982075 C = 6457.025199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.456 5.456 3 C -0.002 4.002 4 Cl -0.022 7.022 5 C 0.009 3.991 6 N -0.463 5.463 7 C 0.257 3.743 8 C 0.144 3.856 9 N -0.521 5.521 10 C 0.193 3.807 11 C -0.504 4.504 12 H 0.068 0.932 13 C 0.056 3.944 14 N -0.901 5.901 15 Si 0.896 3.104 16 H -0.270 1.270 17 H -0.286 1.286 18 H -0.285 1.285 19 C 0.078 3.922 20 C -0.131 4.131 21 C -0.177 4.177 22 C -0.188 4.188 23 H 0.082 0.918 24 H 0.093 0.907 25 H 0.085 0.915 26 H 0.176 0.824 27 H 0.119 0.881 28 H 0.038 0.962 29 H -0.009 1.009 30 H 0.042 0.958 31 H 0.260 0.740 32 H 0.028 0.972 33 H 0.059 0.941 34 H 0.118 0.882 35 H 0.084 0.916 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.350 16.496 1.444 17.402 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.142 5.142 3 C -0.142 4.142 4 Cl 0.006 6.994 5 C -0.142 4.142 6 N -0.181 5.181 7 C -0.006 4.006 8 C 0.014 3.986 9 N -0.247 5.247 10 C 0.068 3.932 11 C -0.543 4.543 12 H 0.086 0.914 13 C -0.145 4.145 14 N -0.541 5.541 15 Si 0.724 3.276 16 H -0.194 1.194 17 H -0.212 1.212 18 H -0.211 1.211 19 C -0.050 4.050 20 C -0.149 4.149 21 C -0.214 4.214 22 C -0.226 4.226 23 H 0.101 0.899 24 H 0.111 0.889 25 H 0.104 0.896 26 H 0.193 0.807 27 H 0.137 0.863 28 H 0.056 0.944 29 H 0.009 0.991 30 H 0.060 0.940 31 H 0.070 0.930 32 H 0.046 0.954 33 H 0.077 0.923 34 H 0.136 0.864 35 H 0.103 0.897 36 H 0.108 0.892 37 H 0.109 0.891 38 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -4.493 16.035 1.178 16.694 hybrid contribution -0.830 0.126 0.426 0.941 sum -5.323 16.161 1.604 17.091 Atomic orbital electron populations 1.22209 0.76748 1.04857 1.04063 1.45249 1.07581 1.05686 1.55690 1.21665 0.91387 0.81780 1.19370 1.98348 1.91876 1.11451 1.97695 1.22188 0.94156 0.91498 1.06344 1.70515 1.18518 1.09804 1.19277 1.23566 0.85129 0.90263 1.01593 1.20458 1.00222 0.85313 0.92592 1.62068 1.42425 1.08398 1.11784 1.19844 0.96908 0.79092 0.97309 1.21245 0.95931 0.90940 1.46183 0.91373 1.24963 0.96560 0.97553 0.95420 1.69960 1.28063 1.06849 1.49183 0.86462 0.83894 0.79576 0.77692 1.19396 1.21199 1.21127 1.21830 0.92943 0.97627 0.92623 1.22325 1.01608 0.98751 0.92207 1.22900 0.98163 0.97808 1.02516 1.22933 0.92090 1.04731 1.02809 0.89920 0.88857 0.89641 0.80695 0.86294 0.94368 0.99090 0.94015 0.93031 0.95434 0.92275 0.86438 0.89731 0.89183 0.89063 0.89607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.66 9.49 59.85 0.57 1.23 16 2 N -0.46 -6.45 2.74 -117.76 -0.32 -6.77 16 3 C 0.00 -0.03 7.49 -16.52 -0.12 -0.16 16 4 Cl -0.02 -0.24 28.94 -51.86 -1.50 -1.74 16 5 C 0.01 0.14 11.86 -17.75 -0.21 -0.07 16 6 N -0.46 -8.63 11.25 -10.76 -0.12 -8.75 16 7 C 0.26 4.44 6.60 -155.33 -1.02 3.41 16 8 C 0.14 2.66 5.10 -4.97 -0.03 2.63 16 9 N -0.52 -10.71 4.39 -237.51 -1.04 -11.75 16 10 C 0.19 4.72 4.56 -4.97 -0.02 4.70 16 11 C -0.50 -13.77 8.61 -34.44 -0.30 -14.06 16 12 H 0.07 1.90 7.65 -52.48 -0.40 1.50 16 13 C 0.06 1.56 5.46 -17.82 -0.10 1.46 16 14 N -0.90 -26.04 13.29 55.43 0.74 -25.30 16 15 Si 0.90 21.57 29.54 -169.99 -5.02 16.55 16 16 H -0.27 -6.47 7.11 56.52 0.40 -6.06 16 17 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 18 H -0.29 -6.85 7.11 56.52 0.40 -6.44 16 19 C 0.08 1.33 4.63 -3.82 -0.02 1.32 16 20 C -0.13 -2.22 5.57 -90.62 -0.50 -2.73 16 21 C -0.18 -2.60 10.18 -26.69 -0.27 -2.87 16 22 C -0.19 -2.57 10.25 -26.70 -0.27 -2.84 16 23 H 0.08 0.81 6.70 -51.93 -0.35 0.46 16 24 H 0.09 0.90 7.04 -51.93 -0.37 0.53 16 25 H 0.08 0.72 7.93 -51.93 -0.41 0.31 16 26 H 0.18 2.19 8.06 -52.48 -0.42 1.77 16 27 H 0.12 2.43 7.31 -51.93 -0.38 2.05 16 28 H 0.04 0.63 7.04 -51.93 -0.37 0.26 16 29 H -0.01 -0.22 8.00 -51.93 -0.42 -0.64 16 30 H 0.04 1.09 6.24 -51.93 -0.32 0.77 16 31 H 0.26 7.15 8.31 -40.82 -0.34 6.81 16 32 H 0.03 0.46 8.09 -51.93 -0.42 0.04 16 33 H 0.06 0.92 3.74 -51.93 -0.19 0.73 16 34 H 0.12 2.34 6.66 -51.93 -0.35 1.99 16 35 H 0.08 1.22 8.04 -51.93 -0.42 0.80 16 36 H 0.09 1.28 8.14 -51.93 -0.42 0.85 16 37 H 0.09 1.17 8.14 -51.93 -0.42 0.74 16 38 H 0.09 1.04 8.14 -51.93 -0.42 0.62 16 LS Contribution 326.51 15.07 4.92 4.92 Total: -1.00 -30.27 326.51 -9.87 -40.14 By element: Atomic # 1 Polarization: 5.91 SS G_CDS: -5.22 Total: 0.69 kcal Atomic # 6 Polarization: -5.69 SS G_CDS: -2.30 Total: -7.99 kcal Atomic # 7 Polarization: -51.82 SS G_CDS: -0.75 Total: -52.57 kcal Atomic # 14 Polarization: 21.57 SS G_CDS: -5.02 Total: 16.55 kcal Atomic # 17 Polarization: -0.24 SS G_CDS: -1.50 Total: -1.74 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -30.27 -9.87 -40.14 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000081044201.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 133.114 kcal (2) G-P(sol) polarization free energy of solvation -30.269 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.845 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.867 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.136 kcal (6) G-S(sol) free energy of system = (1) + (5) 92.978 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds