Wall clock time and date at job start Tue Mar 31 2020 05:33:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.33329 * 119.99934 * 2 1 4 4 H 1.07995 * 120.00242 * 187.40953 * 3 2 1 5 5 C 1.46786 * 120.00061 * 7.40379 * 3 2 1 6 6 N 1.29319 * 120.00064 * 7.32222 * 5 3 2 7 7 Si 1.86799 * 120.00396 * 187.32156 * 5 3 2 8 8 H 1.48500 * 109.47070 * 89.99869 * 7 5 3 9 9 H 1.48499 * 109.47402 * 210.00140 * 7 5 3 10 10 H 1.48508 * 109.46800 * 330.00033 * 7 5 3 11 11 C 1.34771 * 120.00263 * 179.97438 * 2 1 3 12 12 O 1.21487 * 119.99832 * 183.75549 * 11 2 1 13 13 C 1.47613 * 120.00073 * 3.75278 * 11 2 1 14 14 C 1.39715 * 120.16190 * 305.50587 * 13 11 2 15 15 C 1.37870 * 119.85591 * 180.27473 * 14 13 11 16 16 C 1.38449 * 120.19323 * 359.97438 * 15 14 13 17 17 N 1.48016 * 119.83516 * 179.97438 * 16 15 14 18 18 O 1.31699 * 119.99865 * 180.02562 * 17 16 15 19 19 O 1.31698 * 119.99780 * 0.02562 * 17 16 15 20 20 C 1.38291 * 120.33289 * 0.02562 * 16 15 14 21 21 C 1.38130 * 120.13729 * 359.97438 * 20 16 15 22 22 Cl 1.73596 * 120.09509 * 179.97438 * 21 20 16 23 23 H 1.08998 * 109.46373 * 174.18478 * 1 2 3 24 24 H 1.09001 * 109.47223 * 294.18446 * 1 2 3 25 25 H 1.09000 * 109.47199 * 54.18481 * 1 2 3 26 26 H 0.97000 * 120.00470 * 179.97438 * 6 5 3 27 27 H 1.07998 * 120.07674 * 0.24825 * 14 13 11 28 28 H 1.08007 * 119.90302 * 179.97438 * 15 14 13 29 29 H 1.07996 * 119.93079 * 180.02562 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1317 1.1547 0.0000 4 1 3.2048 1.1586 -0.1206 5 6 1.4069 2.4206 0.1638 6 7 0.1456 2.4113 0.4491 7 14 2.3064 4.0450 -0.0398 8 1 2.2359 4.4753 -1.4593 9 1 1.6708 5.0742 0.8216 10 1 3.7277 3.8768 0.3566 11 6 2.1389 -1.1671 0.0005 12 8 3.3518 -1.1681 0.0694 13 6 1.4033 -2.4442 -0.0826 14 6 0.3908 -2.7321 0.8361 15 6 -0.2884 -3.9293 0.7561 16 6 0.0298 -4.8457 -0.2317 17 7 -0.7040 -6.1288 -0.3099 18 8 -0.4036 -7.0031 -1.2479 19 8 -1.6573 -6.3960 0.5586 20 6 1.0306 -4.5688 -1.1450 21 6 1.7199 -3.3737 -1.0776 22 17 2.9764 -3.0276 -2.2243 23 1 -0.3632 -1.0224 -0.1041 24 1 -0.3634 0.4210 0.9375 25 1 -0.3633 0.6014 -0.8333 26 1 -0.3333 3.2478 0.5577 27 1 0.1409 -2.0188 1.6074 28 1 -1.0710 -4.1529 1.4661 29 1 1.2732 -5.2882 -1.9131 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000034538799.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:33:49 Heat of formation + Delta-G solvation = 35.869803 kcal Electronic energy + Delta-G solvation = -19588.645205 eV Core-core repulsion = 16122.598734 eV Total energy + Delta-G solvation = -3466.046470 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 284.040 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -40.27439 -38.87776 -37.61531 -36.26418 -35.15996 -34.20833 -32.68052 -31.61484 -31.00300 -27.32360 -26.51988 -24.76363 -22.97515 -22.50531 -20.04255 -18.60925 -17.92271 -17.64629 -16.92805 -15.79521 -15.59568 -15.49477 -15.10011 -14.62581 -14.21204 -13.92403 -13.84907 -13.30502 -12.67034 -12.18831 -12.15674 -11.64884 -11.52252 -11.44568 -11.26854 -11.13808 -10.99815 -10.82098 -10.69207 -10.68511 -10.51786 -9.66370 -9.27068 -8.96007 -8.70329 -8.60229 -7.11738 -4.01822 -0.69007 0.95146 1.06710 1.28531 2.26220 2.72834 2.88001 2.91342 3.09253 3.57578 3.66049 4.25116 4.44050 4.53840 4.67953 4.97330 4.99620 5.06901 5.43927 5.65757 5.76348 5.93075 5.96106 6.08573 6.39896 6.50753 6.56468 6.85790 6.98684 7.40556 7.81028 8.56683 8.79864 9.57351 9.79354 Molecular weight = 284.04amu Principal moments of inertia in cm(-1) A = 0.026193 B = 0.004892 C = 0.004301 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1068.713884 B = 5721.980597 C = 6508.415831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.080 3.920 2 N -0.382 5.382 3 C -0.294 4.294 4 H 0.124 0.876 5 C 0.036 3.964 6 N -0.809 5.809 7 Si 0.943 3.057 8 H -0.268 1.268 9 H -0.275 1.275 10 H -0.257 1.257 11 C 0.415 3.585 12 O -0.579 6.579 13 C -0.022 4.022 14 C -0.101 4.101 15 C -0.050 4.050 16 C -0.022 4.022 17 N -0.001 5.001 18 O -0.201 6.201 19 O -0.198 6.198 20 C -0.046 4.046 21 C -0.023 4.023 22 Cl -0.029 7.029 23 H 0.043 0.957 24 H 0.089 0.911 25 H 0.067 0.933 26 H 0.288 0.712 27 H 0.156 0.844 28 H 0.156 0.844 29 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.475 -2.722 -0.887 3.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.092 5.092 3 C -0.424 4.424 4 H 0.142 0.858 5 C -0.180 4.180 6 N -0.442 5.442 7 Si 0.767 3.233 8 H -0.193 1.193 9 H -0.200 1.200 10 H -0.181 1.181 11 C 0.209 3.791 12 O -0.467 6.467 13 C -0.029 4.029 14 C -0.122 4.122 15 C -0.070 4.070 16 C -0.112 4.112 17 N 0.466 4.534 18 O -0.386 6.386 19 O -0.384 6.384 20 C -0.067 4.067 21 C -0.053 4.053 22 Cl 0.000 7.000 23 H 0.062 0.938 24 H 0.107 0.893 25 H 0.086 0.914 26 H 0.101 0.899 27 H 0.174 0.826 28 H 0.173 0.827 29 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -1.704 -1.997 -0.886 2.771 hybrid contribution -0.110 0.354 -0.238 0.440 sum -1.814 -1.643 -1.124 2.693 Atomic orbital electron populations 1.22301 0.80124 0.98776 1.05111 1.42945 1.06654 1.05417 1.54140 1.21215 0.94705 0.81684 1.44777 0.85815 1.27184 0.95292 1.00991 0.94526 1.69096 1.09494 1.30570 1.34992 0.85619 0.80319 0.78200 0.79188 1.19276 1.20018 1.18113 1.17146 0.87534 0.82079 0.92352 1.90656 1.12287 1.85097 1.58686 1.20545 0.93486 0.96296 0.92573 1.21325 0.95114 0.96201 0.99516 1.20974 0.98869 0.91564 0.95578 1.19956 1.01216 0.85487 1.04491 1.50285 1.00097 1.02849 1.00159 1.96243 1.72724 1.42697 1.26964 1.96236 1.22412 1.85100 1.34641 1.20646 0.92356 0.95952 0.97728 1.20551 0.95276 0.94636 0.94827 1.98402 1.49597 1.94775 1.57177 0.93818 0.89265 0.91423 0.89883 0.82647 0.82663 0.82404 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 54. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.51 7.96 59.85 0.48 1.99 15 2 N -0.38 -8.47 2.93 -121.79 -0.36 -8.82 15 3 C -0.29 -6.92 9.74 -13.45 -0.13 -7.05 15 4 H 0.12 3.10 7.25 -52.49 -0.38 2.72 15 5 C 0.04 0.76 5.56 -15.16 -0.08 0.68 15 6 N -0.81 -16.91 9.73 56.00 0.55 -16.37 15 7 Si 0.94 16.83 29.65 -169.99 -5.04 11.79 15 8 H -0.27 -4.76 7.11 56.52 0.40 -4.36 15 9 H -0.28 -4.78 7.11 56.52 0.40 -4.37 15 10 H -0.26 -4.71 7.11 56.52 0.40 -4.30 15 11 C 0.42 9.22 6.52 -12.44 -0.08 9.14 15 12 O -0.58 -14.82 15.72 5.38 0.08 -14.73 15 13 C -0.02 -0.40 4.85 -104.94 -0.51 -0.90 15 14 C -0.10 -1.52 7.42 -39.16 -0.29 -1.81 15 15 C -0.05 -0.69 9.56 -39.64 -0.38 -1.07 15 16 C -0.02 -0.34 6.89 -79.85 -0.55 -0.89 15 17 N 0.00 -0.02 4.98 34.01 0.17 0.15 15 18 O -0.20 -3.57 19.13 -31.57 -0.60 -4.17 15 19 O -0.20 -3.44 19.14 -31.57 -0.60 -4.05 15 20 C -0.05 -0.71 9.35 -39.60 -0.37 -1.08 15 21 C -0.02 -0.40 6.35 -39.04 -0.25 -0.65 15 22 Cl -0.03 -0.50 27.39 -51.86 -1.42 -1.92 15 23 H 0.04 0.71 4.62 -51.93 -0.24 0.47 15 24 H 0.09 1.72 6.80 -51.93 -0.35 1.37 15 25 H 0.07 1.34 7.40 -51.93 -0.38 0.95 15 26 H 0.29 5.54 8.26 -40.82 -0.34 5.20 15 27 H 0.16 2.11 7.38 -52.49 -0.39 1.72 15 28 H 0.16 1.82 7.56 -52.48 -0.40 1.42 15 29 H 0.16 2.18 7.56 -52.49 -0.40 1.79 15 LS Contribution 281.00 15.07 4.23 4.23 Total: -1.00 -26.11 281.00 -6.83 -32.94 By element: Atomic # 1 Polarization: 4.26 SS G_CDS: -1.67 Total: 2.59 kcal Atomic # 6 Polarization: 0.52 SS G_CDS: -2.17 Total: -1.64 kcal Atomic # 7 Polarization: -25.40 SS G_CDS: 0.36 Total: -25.04 kcal Atomic # 8 Polarization: -21.83 SS G_CDS: -1.12 Total: -22.95 kcal Atomic # 14 Polarization: 16.83 SS G_CDS: -5.04 Total: 11.79 kcal Atomic # 17 Polarization: -0.50 SS G_CDS: -1.42 Total: -1.92 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -26.11 -6.83 -32.94 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000034538799.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.808 kcal (2) G-P(sol) polarization free energy of solvation -26.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.697 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.828 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.938 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds