Wall clock time and date at job start Tue Mar 31 2020 05:48:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38282 * 119.95910 * 2 1 4 4 C 1.38243 * 120.11823 * 180.02562 * 3 2 1 5 5 C 1.38258 * 120.04365 * 359.76593 * 4 3 2 6 6 Cl 1.73594 * 120.03885 * 180.27659 * 5 4 3 7 7 C 1.38815 * 119.92016 * 0.50818 * 5 4 3 8 8 O 1.35927 * 120.05698 * 179.74748 * 7 5 4 9 9 C 1.42901 * 117.00036 * 174.23749 * 8 7 5 10 10 H 1.09002 * 109.47001 * 325.00683 * 9 8 7 11 11 C 1.53003 * 109.47137 * 85.00155 * 9 8 7 12 12 C 1.50699 * 109.47301 * 205.00575 * 9 8 7 13 13 O 1.21211 * 119.99741 * 359.97438 * 12 9 8 14 14 O 1.34308 * 119.99886 * 179.72859 * 12 9 8 15 15 C 1.34921 * 116.99934 * 180.27290 * 14 12 9 16 16 H 1.07998 * 120.00057 * 359.97438 * 15 14 12 17 17 C 1.38751 * 120.00050 * 179.97438 * 15 14 12 18 18 N 1.31449 * 119.99993 * 359.97438 * 17 15 14 19 19 Si 1.86799 * 120.00111 * 179.97438 * 17 15 14 20 20 H 1.48497 * 109.46896 * 60.00071 * 19 17 15 21 21 H 1.48505 * 109.47034 * 179.97438 * 19 17 15 22 22 H 1.48496 * 109.46943 * 300.00200 * 19 17 15 23 23 C 1.38149 * 119.96435 * 180.02562 * 2 1 3 24 24 H 1.09002 * 109.47416 * 269.97518 * 1 2 3 25 25 H 1.09001 * 109.47716 * 29.97830 * 1 2 3 26 26 H 1.09001 * 109.47393 * 149.98074 * 1 2 3 27 27 H 1.08005 * 119.93987 * 0.02562 * 3 2 1 28 28 H 1.08005 * 119.97896 * 180.02562 * 4 3 2 29 29 H 1.08998 * 109.46756 * 300.00189 * 11 9 8 30 30 H 1.09001 * 109.46741 * 59.99814 * 11 9 8 31 31 H 1.09001 * 109.47170 * 180.02562 * 11 9 8 32 32 H 0.97001 * 119.99603 * 179.97438 * 18 17 15 33 33 H 1.08002 * 120.02113 * 359.97438 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1975 1.1980 0.0000 4 6 3.5800 1.2019 -0.0005 5 6 4.2755 0.0070 0.0038 6 17 6.0114 0.0120 0.0104 7 6 3.5840 -1.1967 -0.0019 8 8 4.2650 -2.3730 -0.0029 9 6 3.4933 -3.5695 0.1190 10 1 2.6412 -3.3872 0.7738 11 6 2.9927 -3.9964 -1.2624 12 6 4.3505 -4.6630 0.7027 13 8 5.5077 -4.4398 0.9858 14 8 3.8307 -5.8833 0.9137 15 6 4.6502 -6.8148 1.4438 16 1 5.6740 -6.5630 1.6779 17 6 4.1776 -8.0962 1.6883 18 7 2.9314 -8.4026 1.4038 19 14 5.3125 -9.3862 2.4216 20 1 5.7967 -8.9235 3.7470 21 1 4.5713 -10.6627 2.5840 22 1 6.4713 -9.5975 1.5174 23 6 2.1970 -1.1968 -0.0005 24 1 -0.3634 -0.0004 1.0277 25 1 -0.3634 0.8902 -0.5135 26 1 -0.3634 -0.8898 -0.5141 27 1 1.6559 2.1324 0.0004 28 1 4.1170 2.1389 -0.0001 29 1 2.3727 -3.2055 -1.6845 30 1 3.8448 -4.1787 -1.9173 31 1 2.4036 -4.9088 -1.1694 32 1 2.6012 -9.2986 1.5744 33 1 1.6567 -2.1320 -0.0005 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000061765102.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:48:34 Heat of formation + Delta-G solvation = -101.122801 kcal Electronic energy + Delta-G solvation = -19731.914895 eV Core-core repulsion = 16363.468323 eV Total energy + Delta-G solvation = -3368.446572 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 284.065 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -40.48336 -39.04814 -37.64385 -36.32737 -35.09638 -32.79052 -32.24551 -31.43006 -30.03586 -26.93488 -25.74029 -24.28517 -22.70149 -21.58813 -20.07385 -18.05234 -17.69312 -16.89756 -16.34036 -15.84224 -15.49422 -14.84224 -14.46359 -14.39169 -14.27407 -13.78179 -13.63900 -13.32139 -12.85315 -12.68346 -12.49156 -11.98241 -11.88021 -11.71781 -11.51011 -11.35353 -11.16151 -10.99766 -10.81094 -10.65637 -10.48982 -10.38581 -9.87709 -9.04905 -8.81915 -8.62438 -8.12944 -6.46641 -4.14779 1.03650 1.25605 2.28815 2.87222 3.09121 3.18118 3.24066 3.41525 3.51100 3.98055 4.45264 4.60227 4.67100 4.85253 5.02475 5.05844 5.13614 5.28815 5.35167 5.38151 5.42218 5.56465 5.74954 5.81649 5.91890 6.02952 6.06191 6.35372 6.38497 6.50030 6.64955 7.33004 7.39530 7.88802 8.63026 9.02019 9.74951 10.70939 Molecular weight = 284.06amu Principal moments of inertia in cm(-1) A = 0.023630 B = 0.004256 C = 0.003739 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1184.653199 B = 6578.072092 C = 7485.836207 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.042 4.042 3 C -0.155 4.155 4 C -0.070 4.070 5 C -0.077 4.077 6 Cl -0.056 7.056 7 C 0.154 3.846 8 O -0.273 6.273 9 C 0.102 3.898 10 H 0.099 0.901 11 C -0.170 4.170 12 C 0.400 3.600 13 O -0.530 6.530 14 O -0.207 6.207 15 C -0.383 4.383 16 H 0.097 0.903 17 C 0.044 3.956 18 N -0.865 5.865 19 Si 0.946 3.054 20 H -0.269 1.269 21 H -0.278 1.278 22 H -0.269 1.269 23 C -0.205 4.205 24 H 0.075 0.925 25 H 0.069 0.931 26 H 0.070 0.930 27 H 0.130 0.870 28 H 0.137 0.863 29 H 0.066 0.934 30 H 0.072 0.928 31 H 0.092 0.908 32 H 0.271 0.729 33 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.717 16.595 -4.184 18.044 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.042 4.042 3 C -0.173 4.173 4 C -0.089 4.089 5 C -0.105 4.105 6 Cl -0.027 7.027 7 C 0.106 3.894 8 O -0.185 6.185 9 C 0.045 3.955 10 H 0.116 0.884 11 C -0.228 4.228 12 C 0.244 3.756 13 O -0.425 6.425 14 O -0.115 6.115 15 C -0.459 4.459 16 H 0.114 0.886 17 C -0.160 4.160 18 N -0.502 5.502 19 Si 0.770 3.230 20 H -0.194 1.194 21 H -0.203 1.203 22 H -0.194 1.194 23 C -0.223 4.223 24 H 0.094 0.906 25 H 0.088 0.912 26 H 0.089 0.911 27 H 0.148 0.852 28 H 0.155 0.845 29 H 0.085 0.915 30 H 0.091 0.909 31 H 0.111 0.889 32 H 0.081 0.919 33 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -5.194 16.383 -4.110 17.671 hybrid contribution 0.515 -0.685 0.380 0.938 sum -4.679 15.698 -3.730 16.799 Atomic orbital electron populations 1.20843 0.90578 1.03133 1.02801 1.19789 0.96348 0.92280 0.95794 1.20840 0.93153 0.97826 1.05526 1.20854 0.94119 0.95936 0.97974 1.20197 0.85665 0.92244 1.12346 1.98376 1.08391 1.98850 1.97058 1.18771 0.90365 0.85640 0.94583 1.86277 1.34739 1.11221 1.86295 1.21590 0.92813 0.82254 0.98863 0.88355 1.22292 1.02558 1.03144 0.94777 1.22400 0.87153 0.84671 0.81329 1.90612 1.18502 1.82273 1.51129 1.83834 1.42579 1.17092 1.67953 1.21211 0.94959 0.88632 1.41076 0.88565 1.25327 0.96840 0.97068 0.96756 1.69979 1.14340 1.21110 1.44728 0.85711 0.79117 0.78593 0.79593 1.19408 1.20305 1.19388 1.21253 0.92167 0.99731 1.09197 0.90637 0.91215 0.91086 0.85211 0.84509 0.91499 0.90942 0.88877 0.91933 0.84052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.91 10.01 36.00 0.36 -0.55 16 2 C -0.04 -0.45 5.88 -104.64 -0.62 -1.07 16 3 C -0.15 -1.56 9.70 -39.56 -0.38 -1.95 16 4 C -0.07 -0.80 9.83 -39.57 -0.39 -1.19 16 5 C -0.08 -1.13 6.33 -39.36 -0.25 -1.38 16 6 Cl -0.06 -0.86 28.50 -51.86 -1.48 -2.34 16 7 C 0.15 2.45 6.59 -39.20 -0.26 2.19 16 8 O -0.27 -5.27 8.79 -39.43 -0.35 -5.61 16 9 C 0.10 1.95 2.75 -27.88 -0.08 1.88 16 10 H 0.10 1.66 6.31 -51.93 -0.33 1.33 16 11 C -0.17 -2.74 9.11 37.16 0.34 -2.41 16 12 C 0.40 10.11 7.28 36.01 0.26 10.37 16 13 O -0.53 -15.02 15.74 -25.78 -0.41 -15.43 16 14 O -0.21 -5.83 9.66 -20.70 -0.20 -6.03 16 15 C -0.38 -11.26 9.64 30.92 0.30 -10.97 16 16 H 0.10 2.87 6.86 -52.49 -0.36 2.51 16 17 C 0.04 1.23 5.49 -17.53 -0.10 1.14 16 18 N -0.86 -24.77 13.67 55.48 0.76 -24.01 16 19 Si 0.95 21.17 29.55 -169.99 -5.02 16.15 16 20 H -0.27 -5.91 7.11 56.52 0.40 -5.51 16 21 H -0.28 -5.94 7.11 56.52 0.40 -5.54 16 22 H -0.27 -5.91 7.11 56.52 0.40 -5.51 16 23 C -0.20 -2.70 7.90 -39.44 -0.31 -3.01 16 24 H 0.08 0.54 8.14 -51.93 -0.42 0.12 16 25 H 0.07 0.43 8.08 -51.93 -0.42 0.01 16 26 H 0.07 0.53 8.08 -51.93 -0.42 0.11 16 27 H 0.13 0.94 8.06 -52.48 -0.42 0.52 16 28 H 0.14 1.23 8.06 -52.48 -0.42 0.80 16 29 H 0.07 0.86 6.92 -51.93 -0.36 0.51 16 30 H 0.07 1.21 8.14 -51.93 -0.42 0.79 16 31 H 0.09 1.53 8.12 -51.93 -0.42 1.11 16 32 H 0.27 7.13 8.31 -40.82 -0.34 6.79 16 33 H 0.14 1.72 5.43 -52.49 -0.29 1.44 16 LS Contribution 308.24 15.07 4.65 4.65 Total: -1.00 -33.51 308.24 -6.59 -40.09 By element: Atomic # 1 Polarization: 2.89 SS G_CDS: -3.42 Total: -0.52 kcal Atomic # 6 Polarization: -5.82 SS G_CDS: -1.12 Total: -6.94 kcal Atomic # 7 Polarization: -24.77 SS G_CDS: 0.76 Total: -24.01 kcal Atomic # 8 Polarization: -26.12 SS G_CDS: -0.95 Total: -27.07 kcal Atomic # 14 Polarization: 21.17 SS G_CDS: -5.02 Total: 16.15 kcal Atomic # 17 Polarization: -0.86 SS G_CDS: -1.48 Total: -2.34 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -33.51 -6.59 -40.09 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000061765102.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.028 kcal (2) G-P(sol) polarization free energy of solvation -33.506 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.534 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.589 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.095 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.123 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds