Wall clock time and date at job start Tue Mar 31 2020 05:27:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.46905 * 111.00172 * 2 1 4 4 C 1.50700 * 109.46934 * 293.95315 * 3 2 1 5 5 H 1.08003 * 119.99882 * 359.97438 * 4 3 2 6 6 C 1.37871 * 119.99678 * 180.02562 * 4 3 2 7 7 N 1.31521 * 119.99599 * 180.02562 * 6 4 3 8 8 Si 1.86798 * 120.00547 * 359.97438 * 6 4 3 9 9 H 1.48502 * 109.46936 * 89.99792 * 8 6 4 10 10 H 1.48488 * 109.47685 * 210.00509 * 8 6 4 11 11 H 1.48508 * 109.46894 * 330.00852 * 8 6 4 12 12 C 1.46907 * 110.99964 * 123.95502 * 2 1 3 13 13 C 1.50696 * 109.47027 * 66.04639 * 12 2 1 14 14 C 1.38238 * 120.41138 * 270.03874 * 13 12 2 15 15 N 1.31848 * 120.78604 * 179.97438 * 14 13 12 16 16 C 1.31884 * 121.73423 * 0.02562 * 15 14 13 17 17 C 1.38276 * 120.74865 * 359.97438 * 16 15 14 18 18 Br 1.89099 * 120.42276 * 180.02562 * 17 16 15 19 19 C 1.38611 * 120.41784 * 90.00503 * 13 12 2 20 20 H 1.09006 * 109.46918 * 296.04641 * 1 2 3 21 21 H 1.09001 * 109.47230 * 56.04511 * 1 2 3 22 22 H 1.09001 * 109.47301 * 176.05110 * 1 2 3 23 23 H 1.08997 * 109.46788 * 53.95486 * 3 2 1 24 24 H 1.08997 * 109.47033 * 173.95397 * 3 2 1 25 25 H 0.97006 * 119.99576 * 179.97438 * 7 6 4 26 26 H 1.09000 * 109.47031 * 306.03917 * 12 2 1 27 27 H 1.08998 * 109.47129 * 186.04899 * 12 2 1 28 28 H 1.08000 * 119.60508 * 0.02562 * 14 13 12 29 29 H 1.08005 * 119.62351 * 179.97438 * 16 15 14 30 30 H 1.08001 * 120.78902 * 0.03299 * 19 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9955 1.3715 0.0000 4 6 1.6369 2.0471 -1.2985 5 1 1.0746 1.5112 -2.0488 6 6 2.0277 3.3491 -1.5289 7 7 1.7144 3.9389 -2.6619 8 14 3.0009 4.2758 -0.2314 9 1 4.4533 4.0622 -0.4557 10 1 2.6937 5.7256 -0.3237 11 1 2.6296 3.7759 1.1168 12 6 1.9954 -0.7660 1.1376 13 6 1.6369 -2.2204 0.9728 14 6 0.4529 -2.7122 1.4898 15 7 0.1316 -3.9832 1.3495 16 6 0.9183 -4.8318 0.7167 17 6 2.1186 -4.4124 0.1731 18 35 3.2391 -5.6369 -0.7330 19 6 2.4898 -3.0816 0.3004 20 1 -0.3633 0.4513 0.9234 21 1 -0.3634 0.5740 -0.8524 22 1 -0.3634 -1.0252 -0.0708 23 1 1.5611 1.9273 0.8309 24 1 3.0797 1.3444 0.1082 25 1 1.9891 4.8550 -2.8239 26 1 1.5611 -0.3872 2.0628 27 1 3.0797 -0.6611 1.1757 28 1 -0.2173 -2.0472 2.0142 29 1 0.6216 -5.8660 0.6220 30 1 3.4214 -2.7253 -0.1139 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000133136464.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:27:32 Heat of formation + Delta-G solvation = 44.017315 kcal Electronic energy + Delta-G solvation = -14446.969431 eV Core-core repulsion = 11902.681672 eV Total energy + Delta-G solvation = -2544.287759 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 284.022 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -40.37300 -36.90232 -33.24075 -32.98133 -31.94358 -29.66808 -27.99219 -27.03645 -24.31693 -23.34515 -21.66014 -20.23716 -17.21390 -16.93390 -16.67561 -15.27149 -14.96849 -14.43596 -14.18651 -13.85379 -13.59067 -13.20814 -12.78568 -12.40815 -11.93893 -11.77856 -11.45028 -11.29442 -11.06500 -10.63936 -10.55438 -10.49465 -10.02129 -9.61598 -9.56324 -9.35305 -8.92457 -8.62326 -7.53011 -6.10339 -4.08607 0.79317 1.11931 1.40696 3.23976 3.31969 3.32261 3.56255 4.30540 4.36539 4.63129 4.70864 4.82163 4.91216 5.08738 5.22099 5.39876 5.61499 5.80394 5.84566 5.97929 6.09223 6.22564 6.43156 6.58201 6.76591 6.88152 7.48106 7.72638 7.76683 7.90077 8.57621 8.97897 9.50408 11.02651 Molecular weight = 284.02amu Principal moments of inertia in cm(-1) A = 0.028240 B = 0.004154 C = 0.003865 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 991.280824 B = 6738.684061 C = 7243.279614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 N -0.526 5.526 3 C 0.162 3.838 4 C -0.512 4.512 5 H 0.081 0.919 6 C 0.069 3.931 7 N -0.899 5.899 8 Si 0.875 3.125 9 H -0.275 1.275 10 H -0.286 1.286 11 H -0.268 1.268 12 C 0.089 3.911 13 C -0.106 4.106 14 C 0.116 3.884 15 N -0.477 5.477 16 C 0.120 3.880 17 C -0.145 4.145 18 Br -0.042 7.042 19 C -0.028 4.028 20 H 0.015 0.985 21 H 0.083 0.917 22 H 0.048 0.952 23 H -0.009 1.009 24 H 0.025 0.975 25 H 0.264 0.736 26 H 0.042 0.958 27 H 0.083 0.917 28 H 0.159 0.841 29 H 0.161 0.839 30 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.089 -18.823 8.104 20.600 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 N -0.250 5.250 3 C 0.036 3.964 4 C -0.550 4.550 5 H 0.099 0.901 6 C -0.132 4.132 7 N -0.537 5.537 8 Si 0.702 3.298 9 H -0.201 1.201 10 H -0.211 1.211 11 H -0.193 1.193 12 C -0.040 4.040 13 C -0.109 4.109 14 C -0.041 4.041 15 N -0.185 5.185 16 C -0.039 4.039 17 C -0.227 4.227 18 Br 0.043 6.957 19 C -0.056 4.056 20 H 0.033 0.967 21 H 0.102 0.898 22 H 0.066 0.934 23 H 0.009 0.991 24 H 0.043 0.957 25 H 0.074 0.926 26 H 0.060 0.940 27 H 0.101 0.899 28 H 0.176 0.824 29 H 0.178 0.822 30 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 1.886 -19.610 7.585 21.110 hybrid contribution 0.835 1.612 1.082 2.113 sum 2.722 -17.998 8.667 20.161 Atomic orbital electron populations 1.22339 0.88003 1.00076 1.01214 1.62007 1.07741 1.16596 1.38646 1.20220 0.94971 0.83594 0.97586 1.20999 1.35911 0.97270 1.00804 0.90090 1.24894 0.95754 0.97317 0.95285 1.69895 1.46682 1.13315 1.23840 0.86870 0.80902 0.79398 0.82627 1.20096 1.21138 1.19286 1.21049 1.01001 0.88168 0.93770 1.20996 0.95095 0.97338 0.97478 1.22869 0.94113 0.91602 0.95510 1.67827 1.32000 1.03757 1.14933 1.22742 0.88711 0.99812 0.92610 1.22931 0.98519 0.95490 1.05729 1.96720 1.64929 1.58008 1.76066 1.21511 0.99946 0.90425 0.93684 0.96651 0.89834 0.93366 0.99110 0.95673 0.92583 0.94041 0.89881 0.82356 0.82216 0.83586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.59 8.97 60.06 0.54 1.13 16 2 N -0.53 -10.40 4.74 -245.82 -1.17 -11.57 16 3 C 0.16 3.75 3.79 -4.97 -0.02 3.74 16 4 C -0.51 -14.16 9.01 -34.44 -0.31 -14.47 16 5 H 0.08 2.46 7.37 -52.48 -0.39 2.07 16 6 C 0.07 1.96 5.47 -17.82 -0.10 1.87 16 7 N -0.90 -27.11 13.96 55.43 0.77 -26.33 16 8 Si 0.87 20.90 27.47 -169.99 -4.67 16.23 16 9 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 10 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 11 H -0.27 -6.13 6.54 56.52 0.37 -5.76 16 12 C 0.09 1.38 5.14 -4.97 -0.03 1.35 16 13 C -0.11 -1.48 4.89 -104.49 -0.51 -1.99 16 14 C 0.12 1.54 9.15 -17.54 -0.16 1.38 16 15 N -0.48 -6.44 10.36 -13.23 -0.14 -6.57 16 16 C 0.12 1.46 10.95 -17.51 -0.19 1.27 16 17 C -0.15 -1.79 6.25 -39.38 -0.25 -2.03 16 18 Br -0.04 -0.45 33.74 -68.01 -2.29 -2.74 16 19 C -0.03 -0.37 9.63 -39.26 -0.38 -0.75 16 20 H 0.01 0.26 8.14 -51.93 -0.42 -0.16 16 21 H 0.08 1.74 6.76 -51.93 -0.35 1.39 16 22 H 0.05 0.79 6.17 -51.93 -0.32 0.47 16 23 H -0.01 -0.20 7.18 -51.93 -0.37 -0.58 16 24 H 0.03 0.58 7.36 -51.93 -0.38 0.19 16 25 H 0.26 7.46 8.31 -40.82 -0.34 7.12 16 26 H 0.04 0.59 8.07 -51.93 -0.42 0.18 16 27 H 0.08 1.22 7.88 -51.93 -0.41 0.81 16 28 H 0.16 1.84 8.03 -52.49 -0.42 1.42 16 29 H 0.16 1.54 8.06 -52.48 -0.42 1.11 16 30 H 0.15 1.86 8.06 -52.49 -0.42 1.43 16 LS Contribution 275.66 15.07 4.15 4.15 Total: -1.00 -29.86 275.66 -8.24 -38.10 By element: Atomic # 1 Polarization: 0.74 SS G_CDS: -3.50 Total: -2.76 kcal Atomic # 6 Polarization: -7.11 SS G_CDS: -1.40 Total: -8.51 kcal Atomic # 7 Polarization: -43.94 SS G_CDS: -0.53 Total: -44.47 kcal Atomic # 14 Polarization: 20.90 SS G_CDS: -4.67 Total: 16.23 kcal Atomic # 35 Polarization: -0.45 SS G_CDS: -2.29 Total: -2.74 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -29.86 -8.24 -38.10 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000133136464.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.113 kcal (2) G-P(sol) polarization free energy of solvation -29.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.256 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.239 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.095 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.017 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds