Wall clock time and date at job start Tue Mar 31 2020 05:18:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.33801 * 122.44582 * 2 1 4 4 S 1.70600 * 111.01426 * 179.97438 * 3 2 1 5 5 C 1.75838 * 91.59214 * 359.97438 * 4 3 2 6 6 C 1.46314 * 125.46659 * 180.02562 * 5 4 3 7 7 O 1.21757 * 119.99694 * 162.48901 * 6 5 4 8 8 N 1.34781 * 120.00220 * 342.49331 * 6 5 4 9 9 C 1.36891 * 119.99832 * 184.82967 * 8 6 5 10 10 H 1.08003 * 120.00320 * 21.53798 * 9 8 6 11 11 C 1.38997 * 120.00064 * 201.53511 * 9 8 6 12 12 N 1.31411 * 119.99722 * 22.99369 * 11 9 8 13 13 Si 1.86797 * 120.00271 * 202.99937 * 11 9 8 14 14 H 1.48500 * 109.47319 * 89.99557 * 13 11 9 15 15 H 1.48495 * 109.46936 * 209.99958 * 13 11 9 16 16 H 1.48498 * 109.47029 * 329.99558 * 13 11 9 17 17 C 1.46501 * 119.99932 * 4.82976 * 8 6 5 18 18 C 1.47199 * 109.46801 * 83.32926 * 17 8 6 19 19 N 5.59893 * 160.53254 * 59.78957 * 2 1 3 20 20 C 1.36914 * 109.06027 * 0.02562 * 5 4 3 21 21 Cl 1.73602 * 123.38278 * 180.02562 * 20 5 4 22 22 H 1.08999 * 109.46871 * 270.01872 * 1 2 3 23 23 H 1.08994 * 109.47500 * 30.02286 * 1 2 3 24 24 H 1.09004 * 109.46891 * 150.02981 * 1 2 3 25 25 H 1.07995 * 124.48938 * 0.02562 * 3 2 1 26 26 H 0.97003 * 119.99861 * 180.02562 * 12 11 9 27 27 H 1.08998 * 109.47252 * 203.33143 * 17 8 6 28 28 H 1.09003 * 109.46891 * 323.33599 * 17 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1291 0.0000 4 16 3.8970 0.7910 0.0007 5 6 3.5966 -0.9415 0.0018 6 6 4.6256 -1.9816 0.0033 7 8 4.3386 -3.1214 0.3213 8 7 5.8912 -1.6781 -0.3471 9 6 6.8315 -2.6684 -0.4415 10 1 6.5235 -3.6939 -0.5828 11 6 8.1828 -2.3543 -0.3554 12 7 8.5635 -1.2501 0.2468 13 14 9.4574 -3.5015 -1.0960 14 1 9.7117 -3.1143 -2.5068 15 1 10.7202 -3.4048 -0.3207 16 1 8.9535 -4.8976 -1.0490 17 6 6.2604 -0.2882 -0.6270 18 6 6.5568 0.4048 0.6374 19 7 6.7859 0.9389 1.6125 20 6 2.2451 -1.1609 0.0010 21 17 1.5345 -2.7448 0.0023 22 1 -0.3633 0.0003 1.0277 23 1 -0.3634 0.8897 -0.5141 24 1 -0.3633 -0.8903 -0.5134 25 1 1.8018 2.1228 0.0004 26 1 9.5065 -1.0307 0.3065 27 1 7.1421 -0.2685 -1.2676 28 1 5.4339 0.2129 -1.1308 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000276675484.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:18:34 Heat of formation + Delta-G solvation = 36.926169 kcal Electronic energy + Delta-G solvation = -17751.321352 eV Core-core repulsion = 14728.073561 eV Total energy + Delta-G solvation = -3023.247792 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 284.013 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.11659 -37.97651 -35.83738 -35.67432 -34.45376 -32.16274 -30.60785 -28.04427 -27.29755 -25.60845 -23.31623 -20.02494 -18.84026 -18.12134 -17.60817 -16.65677 -15.74408 -15.41623 -14.64931 -14.25170 -14.03032 -13.57233 -13.47242 -13.31910 -12.76685 -12.35906 -12.26801 -11.99439 -11.97094 -11.76335 -11.44246 -11.30223 -11.16538 -10.72765 -10.62982 -10.49326 -10.32477 -10.24557 -9.40017 -8.76846 -8.38043 -8.22112 -7.94436 -6.68519 -4.12822 0.81660 1.56502 2.12345 2.51285 2.93318 3.06402 3.14981 3.19416 3.48942 3.78592 3.97746 4.01798 4.56262 4.74181 4.96297 5.11405 5.19119 5.46227 5.54438 5.67796 5.78209 5.89862 5.96127 6.20661 6.37273 6.43080 7.31262 7.74513 8.12003 8.57199 8.83111 8.98464 9.57633 10.36986 Molecular weight = 284.01amu Principal moments of inertia in cm(-1) A = 0.023711 B = 0.006774 C = 0.005506 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1180.607864 B = 4132.519478 C = 5084.150130 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.103 4.103 3 C -0.279 4.279 4 S 0.235 5.765 5 C -0.219 4.219 6 C 0.510 3.490 7 O -0.542 6.542 8 N -0.425 5.425 9 C -0.306 4.306 10 H 0.114 0.886 11 C 0.034 3.966 12 N -0.862 5.862 13 Si 0.932 3.068 14 H -0.273 1.273 15 H -0.283 1.283 16 H -0.266 1.266 17 C 0.205 3.795 18 C 0.235 3.765 19 N -0.445 5.445 20 C -0.011 4.011 21 Cl -0.029 7.029 22 H 0.069 0.931 23 H 0.066 0.934 24 H 0.069 0.931 25 H 0.165 0.835 26 H 0.278 0.722 27 H 0.135 0.865 28 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.408 5.865 -5.305 12.290 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.117 4.117 3 C -0.416 4.416 4 S 0.505 5.495 5 C -0.341 4.341 6 C 0.299 3.701 7 O -0.424 6.424 8 N -0.145 5.145 9 C -0.434 4.434 10 H 0.132 0.868 11 C -0.172 4.172 12 N -0.499 5.499 13 Si 0.757 3.243 14 H -0.198 1.198 15 H -0.209 1.209 16 H -0.190 1.190 17 C 0.076 3.924 18 C -0.085 4.085 19 N -0.125 5.125 20 C -0.053 4.053 21 Cl 0.000 7.000 22 H 0.087 0.913 23 H 0.085 0.915 24 H 0.088 0.912 25 H 0.182 0.818 26 H 0.088 0.912 27 H 0.153 0.847 28 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -7.806 6.938 -3.652 11.064 hybrid contribution -0.637 -1.423 -0.538 1.649 sum -8.444 5.515 -4.190 10.921 Atomic orbital electron populations 1.20519 0.89562 1.02767 1.02376 1.18334 0.97662 0.90370 1.05288 1.25323 1.01791 1.02452 1.12048 1.83851 1.01049 0.97572 1.67065 1.24954 0.97337 0.97833 1.14003 1.16629 0.82157 0.87336 0.83980 1.90748 1.80337 1.20147 1.51209 1.43513 1.07803 1.05133 1.58008 1.19795 0.84850 0.90652 1.48071 0.86812 1.25430 0.98391 0.97809 0.95584 1.69867 1.18230 1.25820 1.35947 0.85824 0.79016 0.80504 0.78938 1.19843 1.20890 1.19009 1.18979 1.02213 0.82180 0.89067 1.28847 0.91772 0.92661 0.95189 1.80862 1.10138 1.11133 1.10395 1.19962 0.90879 0.87885 1.06542 1.98345 1.82683 1.22381 1.96568 0.91251 0.91541 0.91196 0.81783 0.91157 0.84729 0.89224 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.07 9.86 36.01 0.35 -0.72 15 2 C -0.10 -1.55 5.78 -106.42 -0.62 -2.16 15 3 C -0.28 -3.85 10.67 29.18 0.31 -3.54 15 4 S 0.24 3.76 16.43 -107.50 -1.77 2.00 15 5 C -0.22 -4.37 6.14 -36.82 -0.23 -4.60 15 6 C 0.51 12.15 7.45 -13.01 -0.10 12.06 15 7 O -0.54 -14.49 15.03 5.14 0.08 -14.41 15 8 N -0.43 -9.99 2.59 -119.55 -0.31 -10.30 15 9 C -0.31 -7.68 9.20 -15.01 -0.14 -7.82 15 10 H 0.11 2.99 7.51 -52.48 -0.39 2.59 15 11 C 0.03 0.81 4.78 -17.45 -0.08 0.72 15 12 N -0.86 -21.04 9.77 55.50 0.54 -20.50 15 13 Si 0.93 18.77 29.61 -169.99 -5.03 13.74 15 14 H -0.27 -5.29 7.11 56.52 0.40 -4.89 15 15 H -0.28 -5.80 7.11 56.52 0.40 -5.40 15 16 H -0.27 -5.45 7.11 56.52 0.40 -5.05 15 17 C 0.21 4.06 4.74 -6.83 -0.03 4.03 15 18 C 0.23 5.06 10.89 -20.79 -0.23 4.84 15 19 N -0.45 -10.23 18.53 42.12 0.78 -9.45 15 20 C -0.01 -0.20 6.38 -40.31 -0.26 -0.46 15 21 Cl -0.03 -0.52 26.35 -51.86 -1.37 -1.89 15 22 H 0.07 0.74 8.14 -51.93 -0.42 0.32 15 23 H 0.07 0.62 8.12 -51.93 -0.42 0.19 15 24 H 0.07 0.79 7.40 -51.93 -0.38 0.41 15 25 H 0.16 1.74 8.06 -52.49 -0.42 1.32 15 26 H 0.28 6.51 8.31 -40.82 -0.34 6.17 15 27 H 0.14 2.60 6.73 -51.93 -0.35 2.25 15 28 H 0.09 1.48 4.64 -24.35 -0.11 1.37 15 LS Contribution 274.41 15.07 4.14 4.14 Total: -1.00 -29.43 274.41 -5.59 -35.02 By element: Atomic # 1 Polarization: 0.93 SS G_CDS: -1.64 Total: -0.71 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: -1.01 Total: 2.36 kcal Atomic # 7 Polarization: -41.26 SS G_CDS: 1.01 Total: -40.25 kcal Atomic # 8 Polarization: -14.49 SS G_CDS: 0.08 Total: -14.41 kcal Atomic # 14 Polarization: 18.77 SS G_CDS: -5.03 Total: 13.74 kcal Atomic # 16 Polarization: 3.76 SS G_CDS: -1.77 Total: 2.00 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.37 Total: -1.89 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -29.43 -5.59 -35.02 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000276675484.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.945 kcal (2) G-P(sol) polarization free energy of solvation -29.427 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.518 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.592 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.019 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds