Wall clock time and date at job start Tue Mar 31 2020 05:23:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 N 1.46507 * 109.47453 * 342.16432 * 3 2 1 5 5 C 1.36931 * 119.99811 * 263.92857 * 4 3 2 6 6 H 1.08002 * 120.00067 * 199.14254 * 5 4 3 7 7 C 1.38810 * 120.00309 * 19.13375 * 5 4 3 8 8 N 1.31624 * 120.00005 * 22.47812 * 7 5 4 9 9 Si 1.86798 * 120.00267 * 202.47882 * 7 5 4 10 10 H 1.48500 * 109.47381 * 89.99930 * 9 7 5 11 11 H 1.48506 * 109.47420 * 210.00174 * 9 7 5 12 12 H 1.48504 * 109.47245 * 329.99978 * 9 7 5 13 13 C 1.46493 * 119.99920 * 83.92213 * 4 3 2 14 14 C 1.50708 * 109.46988 * 90.00234 * 13 4 3 15 15 N 1.31899 * 119.61854 * 269.98210 * 14 13 4 16 16 C 1.31942 * 121.72096 * 180.02562 * 15 14 13 17 17 Cl 1.73594 * 119.62205 * 180.02562 * 16 15 14 18 18 C 1.38404 * 120.75929 * 359.97438 * 16 15 14 19 19 C 1.38557 * 119.15969 * 359.74470 * 18 16 15 20 20 C 1.38262 * 119.61583 * 89.99480 * 14 13 4 21 21 Cl 1.73597 * 120.41867 * 359.96113 * 20 14 13 22 22 H 4.40646 * 5.51503 * 180.02562 * 4 1 2 23 23 H 1.09000 * 109.47016 * 222.16360 * 3 2 1 24 24 H 1.09003 * 109.46945 * 102.16512 * 3 2 1 25 25 H 0.96995 * 120.00041 * 179.97438 * 8 7 5 26 26 H 1.08997 * 109.47348 * 330.00814 * 13 4 3 27 27 H 1.08994 * 109.47406 * 209.99882 * 13 4 3 28 28 H 1.07995 * 120.41705 * 180.02562 * 18 16 15 29 29 H 1.07993 * 120.78408 * 180.25314 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1350 -1.3140 0.4231 5 6 3.4816 -1.5273 1.7305 6 1 4.1172 -2.3605 1.9917 7 6 3.0162 -0.6725 2.7203 8 7 1.9320 0.0447 2.5140 9 14 3.9285 -0.5402 4.3449 10 1 4.9544 0.5294 4.2509 11 1 2.9669 -0.2098 5.4273 12 1 4.5896 -1.8348 4.6484 13 6 3.2531 -2.4003 -0.5526 14 6 4.6254 -2.3699 -1.1747 15 7 4.8304 -1.6599 -2.2671 16 6 6.0146 -1.6043 -2.8464 17 17 6.2234 -0.6519 -4.2826 18 6 7.0925 -2.2957 -2.3215 19 6 6.9167 -3.0478 -1.1711 20 6 5.6550 -3.0869 -0.5936 21 17 5.3753 -4.0179 0.8447 22 1 -1.0498 -0.0005 0.0000 23 1 3.0090 0.7626 0.6898 24 1 3.0092 0.2174 -1.0046 25 1 1.6066 0.6417 3.2058 26 1 2.4992 -2.2743 -1.3297 27 1 3.1023 -3.3566 -0.0518 28 1 8.0594 -2.2460 -2.7999 29 1 7.7407 -3.5944 -0.7368 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281255283.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:23:53 Heat of formation + Delta-G solvation = 108.767189 kcal Electronic energy + Delta-G solvation = -17541.492616 eV Core-core repulsion = 14519.316378 eV Total energy + Delta-G solvation = -3022.176238 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 284.018 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.16599 -36.80774 -36.20617 -36.01067 -32.76401 -31.77417 -31.53057 -30.07755 -26.72992 -25.83492 -23.39392 -22.93695 -20.99601 -17.58111 -17.13580 -16.75992 -16.19577 -15.81004 -15.32501 -14.38739 -13.97784 -13.58248 -13.48602 -13.28748 -12.76777 -12.36624 -12.13884 -11.56437 -11.46325 -11.25901 -11.15065 -11.10495 -10.82467 -10.63392 -10.14050 -9.86806 -9.73214 -9.48651 -8.93394 -8.76672 -8.46837 -8.42059 -7.06475 -5.80055 -3.23642 0.92506 1.18963 1.79756 2.38617 3.36162 3.43784 3.44884 3.63519 4.22169 4.42760 4.52319 4.54380 4.77375 4.91250 5.00628 5.34589 5.60029 5.66179 5.74269 5.87180 5.92528 6.29943 6.40372 6.55998 6.79044 7.21239 7.43982 7.82024 7.89182 8.24389 9.08176 9.22687 9.72828 10.18626 11.23349 Molecular weight = 284.02amu Principal moments of inertia in cm(-1) A = 0.015721 B = 0.006885 C = 0.005527 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1780.683172 B = 4065.983810 C = 5064.692552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.298 4.298 2 C -0.094 4.094 3 C 0.267 3.733 4 N -0.567 5.567 5 C -0.276 4.276 6 H 0.089 0.911 7 C 0.009 3.991 8 N -0.883 5.883 9 Si 0.894 3.106 10 H -0.287 1.287 11 H -0.292 1.292 12 H -0.278 1.278 13 C 0.184 3.816 14 C 0.165 3.835 15 N -0.458 5.458 16 C 0.176 3.824 17 Cl -0.039 7.039 18 C -0.162 4.162 19 C -0.060 4.060 20 C -0.074 4.074 21 Cl -0.034 7.034 22 H 0.190 0.810 23 H 0.091 0.909 24 H 0.044 0.956 25 H 0.254 0.746 26 H 0.065 0.935 27 H 0.080 0.920 28 H 0.146 0.854 29 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.389 -5.455 -9.339 14.322 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.317 4.317 2 C -0.097 4.097 3 C 0.142 3.858 4 N -0.285 5.285 5 C -0.404 4.404 6 H 0.107 0.893 7 C -0.191 4.191 8 N -0.525 5.525 9 Si 0.724 3.276 10 H -0.214 1.214 11 H -0.219 1.219 12 H -0.203 1.203 13 C 0.055 3.945 14 C 0.023 3.977 15 N -0.170 5.170 16 C 0.011 3.989 17 Cl -0.010 7.010 18 C -0.183 4.183 19 C -0.087 4.087 20 C -0.104 4.104 21 Cl -0.005 7.005 22 H 0.207 0.793 23 H 0.109 0.891 24 H 0.062 0.938 25 H 0.065 0.935 26 H 0.083 0.917 27 H 0.098 0.902 28 H 0.164 0.836 29 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 8.595 -4.862 -9.533 13.725 hybrid contribution 0.923 -0.170 1.393 1.680 sum 9.518 -5.032 -8.139 13.497 Atomic orbital electron populations 1.24149 0.95298 1.03999 1.08243 1.24126 0.95152 0.96770 0.93647 1.17770 0.82958 0.88360 0.96695 1.43955 1.73691 1.06028 1.04834 1.19551 1.25315 1.13691 0.81872 0.89333 1.24931 0.96007 1.00576 0.97611 1.70160 1.19210 1.29262 1.33839 0.86419 0.79440 0.78128 0.83655 1.21422 1.21876 1.20349 1.19867 0.87697 0.94258 0.92710 1.22940 0.99643 0.87527 0.87610 1.67128 1.22341 1.17944 1.09587 1.21757 0.91118 0.94900 0.91157 1.98389 1.96513 1.70728 1.35401 1.21643 0.99526 0.99668 0.97496 1.21453 0.96022 0.97101 0.94107 1.21922 0.95654 1.00170 0.92647 1.98388 1.96195 1.70660 1.35225 0.79259 0.89103 0.93789 0.93523 0.91707 0.90187 0.83638 0.83382 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.30 -6.86 19.25 29.55 0.57 -6.29 15 2 C -0.09 -2.32 11.51 -37.12 -0.43 -2.74 15 3 C 0.27 6.41 5.41 -6.83 -0.04 6.38 15 4 N -0.57 -13.49 2.47 -177.95 -0.44 -13.93 15 5 C -0.28 -7.06 9.55 -15.06 -0.14 -7.21 15 6 H 0.09 2.17 5.32 -52.49 -0.28 1.89 15 7 C 0.01 0.23 4.82 -17.43 -0.08 0.15 15 8 N -0.88 -24.75 9.61 55.49 0.53 -24.22 15 9 Si 0.89 21.27 29.61 -169.99 -5.03 16.24 15 10 H -0.29 -6.87 7.11 56.52 0.40 -6.47 15 11 H -0.29 -7.10 7.11 56.52 0.40 -6.70 15 12 H -0.28 -6.48 7.11 56.52 0.40 -6.08 15 13 C 0.18 3.72 5.58 -5.19 -0.03 3.69 15 14 C 0.17 3.00 6.37 -82.55 -0.53 2.47 15 15 N -0.46 -8.16 10.25 -6.59 -0.07 -8.23 15 16 C 0.18 2.63 7.27 -17.44 -0.13 2.51 15 17 Cl -0.04 -0.51 29.11 -51.86 -1.51 -2.02 15 18 C -0.16 -2.01 9.88 -39.40 -0.39 -2.40 15 19 C -0.06 -0.78 9.98 -39.25 -0.39 -1.17 15 20 C -0.07 -1.19 6.33 -39.36 -0.25 -1.44 15 21 Cl -0.03 -0.55 24.85 -51.86 -1.29 -1.84 15 22 H 0.19 3.66 7.80 -54.10 -0.42 3.24 15 23 H 0.09 2.38 6.58 -51.93 -0.34 2.04 15 24 H 0.04 0.99 8.12 -51.93 -0.42 0.56 15 25 H 0.25 7.05 8.31 -40.82 -0.34 6.71 15 26 H 0.06 1.30 8.07 -51.93 -0.42 0.88 15 27 H 0.08 1.58 6.79 -51.93 -0.35 1.23 15 28 H 0.15 1.32 8.06 -52.49 -0.42 0.90 15 29 H 0.15 1.45 8.06 -52.49 -0.42 1.03 15 LS Contribution 290.26 15.07 4.37 4.37 Total: -1.00 -28.95 290.26 -7.48 -36.43 By element: Atomic # 1 Polarization: 1.45 SS G_CDS: -2.22 Total: -0.76 kcal Atomic # 6 Polarization: -4.23 SS G_CDS: -1.83 Total: -6.06 kcal Atomic # 7 Polarization: -46.39 SS G_CDS: 0.03 Total: -46.37 kcal Atomic # 14 Polarization: 21.27 SS G_CDS: -5.03 Total: 16.24 kcal Atomic # 17 Polarization: -1.05 SS G_CDS: -2.80 Total: -3.85 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -28.95 -7.48 -36.43 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281255283.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 145.198 kcal (2) G-P(sol) polarization free energy of solvation -28.950 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 116.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.482 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.431 kcal (6) G-S(sol) free energy of system = (1) + (5) 108.767 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds