Wall clock time and date at job start Tue Mar 31 2020 05:24:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 N 1.46497 * 109.47546 * 316.93891 * 3 2 1 5 5 C 1.36945 * 120.00088 * 273.28368 * 4 3 2 6 6 H 1.07995 * 119.99922 * 188.44433 * 5 4 3 7 7 C 1.38817 * 119.99539 * 8.44515 * 5 4 3 8 8 N 1.31615 * 120.00167 * 17.98999 * 7 5 4 9 9 Si 1.86802 * 119.99703 * 197.98584 * 7 5 4 10 10 H 1.48501 * 109.47111 * 0.02562 * 9 7 5 11 11 H 1.48503 * 109.46882 * 119.99931 * 9 7 5 12 12 H 1.48493 * 109.47354 * 240.00548 * 9 7 5 13 13 C 1.46496 * 120.00267 * 93.28194 * 4 3 2 14 14 C 1.50706 * 109.46973 * 84.20404 * 13 4 3 15 15 C 1.38645 * 120.40835 * 261.79693 * 14 13 4 16 16 C 1.38605 * 118.45012 * 179.97438 * 15 14 13 17 17 C 1.38359 * 119.18041 * 0.02562 * 16 15 14 18 18 Cl 1.73600 * 119.62578 * 180.02562 * 17 16 15 19 19 N 1.31973 * 120.74793 * 359.97438 * 17 16 15 20 20 C 1.31994 * 121.68749 * 0.02562 * 19 17 16 21 21 Cl 1.73600 * 119.62676 * 179.97438 * 20 19 17 22 22 H 4.40643 * 5.51412 * 180.02562 * 4 1 2 23 23 H 1.09007 * 109.46575 * 196.93731 * 3 2 1 24 24 H 1.09004 * 109.47050 * 76.94322 * 3 2 1 25 25 H 0.96999 * 120.00164 * 179.97438 * 8 7 5 26 26 H 1.09002 * 109.46692 * 324.20548 * 13 4 3 27 27 H 1.08995 * 109.47662 * 204.21042 * 13 4 3 28 28 H 1.07999 * 120.77650 * 359.95549 * 15 14 13 29 29 H 1.08007 * 120.40695 * 180.02562 * 16 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1349 -1.0082 0.9430 5 6 3.2990 -0.6879 2.2643 6 1 3.7854 -1.3834 2.9321 7 6 2.8400 0.5307 2.7452 8 7 1.9542 1.2185 2.0564 9 14 3.4796 1.1943 4.3700 10 1 4.4609 0.2384 4.9433 11 1 4.1403 2.5049 4.1437 12 1 2.3469 1.3674 5.3144 13 6 3.4482 -2.3598 0.4726 14 6 4.8484 -2.3859 -0.0841 15 6 5.0623 -2.2886 -1.4505 16 6 6.3667 -2.3165 -1.9182 17 6 7.4056 -2.4400 -1.0128 18 17 9.0439 -2.4754 -1.5860 19 7 7.1652 -2.5303 0.2817 20 6 5.9360 -2.5072 0.7619 21 17 5.6813 -2.6304 2.4747 22 1 -1.0498 -0.0004 0.0001 23 1 3.0088 0.9840 0.2994 24 1 3.0094 -0.2314 -1.0011 25 1 1.6332 2.0699 2.3926 26 1 2.7419 -2.6460 -0.3067 27 1 3.3747 -3.0602 1.3045 28 1 4.2319 -2.1938 -2.1344 29 1 6.5697 -2.2426 -2.9765 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000282374204.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:24:20 Heat of formation + Delta-G solvation = 113.471792 kcal Electronic energy + Delta-G solvation = -17537.128507 eV Core-core repulsion = 14515.156277 eV Total energy + Delta-G solvation = -3021.972231 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 284.018 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -40.16451 -36.86812 -36.20072 -36.11024 -33.08606 -31.72628 -31.45009 -30.05805 -26.55280 -25.83469 -23.59527 -22.86143 -20.94800 -17.72274 -17.47596 -16.76033 -16.32221 -15.39463 -15.18347 -14.55151 -14.18988 -13.64344 -13.47375 -13.30888 -12.89967 -12.22615 -11.97365 -11.62959 -11.47163 -11.29947 -11.17331 -11.04581 -10.85835 -10.63403 -10.13153 -9.77045 -9.71086 -9.59405 -8.97430 -8.90600 -8.46457 -8.36991 -7.20065 -5.79817 -3.21887 0.95857 1.19970 1.68354 2.33884 3.35126 3.44224 3.45445 3.62133 4.18817 4.40603 4.53500 4.68075 4.88804 5.00675 5.15137 5.29368 5.45758 5.59587 5.77812 5.86213 6.00191 6.34585 6.37820 6.49309 6.60020 7.29756 7.42751 7.62620 7.75554 8.16796 9.06022 9.22826 9.69088 10.09153 11.20668 Molecular weight = 284.02amu Principal moments of inertia in cm(-1) A = 0.018646 B = 0.006227 C = 0.005257 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1501.263976 B = 4495.295381 C = 5324.513140 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.310 4.310 2 C -0.082 4.082 3 C 0.268 3.732 4 N -0.578 5.578 5 C -0.259 4.259 6 H 0.090 0.910 7 C 0.002 3.998 8 N -0.895 5.895 9 Si 0.897 3.103 10 H -0.277 1.277 11 H -0.288 1.288 12 H -0.291 1.291 13 C 0.181 3.819 14 C -0.113 4.113 15 C -0.053 4.053 16 C -0.155 4.155 17 C 0.176 3.824 18 Cl -0.039 7.039 19 N -0.480 5.480 20 C 0.207 3.793 21 Cl -0.004 7.004 22 H 0.188 0.812 23 H 0.103 0.897 24 H 0.032 0.968 25 H 0.254 0.746 26 H 0.057 0.943 27 H 0.074 0.926 28 H 0.150 0.850 29 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.828 -7.384 -8.486 13.159 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.329 4.329 2 C -0.085 4.085 3 C 0.144 3.856 4 N -0.296 5.296 5 C -0.387 4.387 6 H 0.108 0.892 7 C -0.196 4.196 8 N -0.540 5.540 9 Si 0.727 3.273 10 H -0.202 1.202 11 H -0.215 1.215 12 H -0.219 1.219 13 C 0.052 3.948 14 C -0.120 4.120 15 C -0.079 4.079 16 C -0.176 4.176 17 C 0.011 3.989 18 Cl -0.011 7.011 19 N -0.194 5.194 20 C 0.042 3.958 21 Cl 0.024 6.976 22 H 0.205 0.795 23 H 0.121 0.879 24 H 0.050 0.950 25 H 0.065 0.935 26 H 0.075 0.925 27 H 0.093 0.907 28 H 0.168 0.832 29 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 7.584 -7.290 -7.691 13.032 hybrid contribution -0.405 0.691 0.594 0.997 sum 7.179 -6.600 -7.097 12.061 Atomic orbital electron populations 1.24115 0.95288 1.05765 1.07738 1.24030 0.94997 0.95512 0.93960 1.17981 0.83062 0.95249 0.89350 1.44111 1.73490 1.05844 1.06115 1.19612 1.32597 1.01590 0.84889 0.89240 1.24825 0.97752 0.98660 0.98325 1.70056 1.29427 1.15554 1.38946 0.86286 0.78465 0.79164 0.83408 1.20157 1.21482 1.21858 1.19808 0.87373 0.89176 0.98394 1.22042 1.00208 0.96647 0.93085 1.21498 0.96471 0.95255 0.94724 1.21807 0.91961 1.03000 1.00797 1.21230 0.87091 1.01550 0.89037 1.98386 1.19371 1.96682 1.86673 1.66176 1.23923 1.14443 1.14810 1.21324 0.87869 0.98167 0.88423 1.98428 1.95167 1.95484 1.08480 0.79475 0.87915 0.95041 0.93527 0.92524 0.90733 0.83240 0.83680 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.31 -6.88 19.25 29.55 0.57 -6.31 15 2 C -0.08 -1.91 11.25 -37.12 -0.42 -2.33 15 3 C 0.27 5.98 5.51 -6.83 -0.04 5.94 15 4 N -0.58 -12.93 2.48 -177.95 -0.44 -13.37 15 5 C -0.26 -6.47 9.05 -15.05 -0.14 -6.61 15 6 H 0.09 2.18 5.36 -52.49 -0.28 1.90 15 7 C 0.00 0.05 5.09 -17.43 -0.09 -0.04 15 8 N -0.90 -24.43 8.60 55.49 0.48 -23.95 15 9 Si 0.90 21.41 29.59 -169.99 -5.03 16.38 15 10 H -0.28 -6.50 7.11 56.52 0.40 -6.09 15 11 H -0.29 -6.97 7.11 56.52 0.40 -6.57 15 12 H -0.29 -7.09 7.11 56.52 0.40 -6.69 15 13 C 0.18 3.28 5.35 -5.19 -0.03 3.25 15 14 C -0.11 -1.86 5.47 -104.44 -0.57 -2.44 15 15 C -0.05 -0.70 9.82 -39.30 -0.39 -1.09 15 16 C -0.15 -1.94 9.88 -39.40 -0.39 -2.33 15 17 C 0.18 2.61 7.27 -17.45 -0.13 2.48 15 18 Cl -0.04 -0.50 29.11 -51.86 -1.51 -2.01 15 19 N -0.48 -8.39 10.32 -7.50 -0.08 -8.46 15 20 C 0.21 3.70 7.27 -17.45 -0.13 3.57 15 21 Cl 0.00 -0.08 24.59 -51.86 -1.28 -1.36 15 22 H 0.19 3.52 7.80 -54.10 -0.42 3.10 15 23 H 0.10 2.58 6.30 -51.92 -0.33 2.25 15 24 H 0.03 0.60 8.05 -51.93 -0.42 0.18 15 25 H 0.25 6.90 8.31 -40.82 -0.34 6.56 15 26 H 0.06 0.93 8.02 -51.93 -0.42 0.51 15 27 H 0.07 1.36 7.13 -51.93 -0.37 0.99 15 28 H 0.15 1.59 8.06 -52.49 -0.42 1.17 15 29 H 0.15 1.34 8.06 -52.48 -0.42 0.92 15 LS Contribution 288.31 15.07 4.34 4.34 Total: -1.00 -28.64 288.31 -7.47 -36.11 By element: Atomic # 1 Polarization: 0.44 SS G_CDS: -2.21 Total: -1.77 kcal Atomic # 6 Polarization: -4.16 SS G_CDS: -1.74 Total: -5.90 kcal Atomic # 7 Polarization: -45.75 SS G_CDS: -0.04 Total: -45.79 kcal Atomic # 14 Polarization: 21.41 SS G_CDS: -5.03 Total: 16.38 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -2.78 Total: -3.37 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -28.64 -7.47 -36.11 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000282374204.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 149.580 kcal (2) G-P(sol) polarization free energy of solvation -28.642 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 120.938 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.466 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.109 kcal (6) G-S(sol) free energy of system = (1) + (5) 113.472 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds