Wall clock time and date at job start Tue Mar 31 2020 05:23:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53004 * 109.46739 * 2 1 4 4 H 1.08999 * 109.47315 * 55.00031 * 3 2 1 5 5 C 1.50692 * 109.46918 * 175.00211 * 3 2 1 6 6 H 1.08003 * 119.99931 * 120.00223 * 5 3 2 7 7 C 1.37873 * 120.00091 * 299.99808 * 5 3 2 8 8 N 1.31522 * 119.99949 * 180.02562 * 7 5 3 9 9 Si 1.86796 * 120.00197 * 0.02562 * 7 5 3 10 10 H 1.48497 * 109.46943 * 89.99862 * 9 7 5 11 11 H 1.48496 * 109.47347 * 210.00203 * 9 7 5 12 12 H 1.48500 * 109.46944 * 329.99763 * 9 7 5 13 13 N 1.46502 * 109.47006 * 294.99972 * 3 2 1 14 14 C 1.39051 * 119.99893 * 85.00334 * 13 3 2 15 15 N 1.32401 * 119.71110 * 359.97438 * 14 13 3 16 16 C 1.31953 * 121.63556 * 180.02562 * 15 14 13 17 17 C 1.38062 * 120.87177 * 0.02562 * 16 15 14 18 18 C 1.38837 * 119.33351 * 0.23945 * 17 16 15 19 19 C 1.38409 * 118.49661 * 359.47349 * 18 17 16 20 20 Br 1.89101 * 120.45795 * 180.26031 * 19 18 17 21 21 H 1.08997 * 109.47471 * 299.99506 * 1 2 3 22 22 H 1.08992 * 109.47275 * 60.00296 * 1 2 3 23 23 H 1.09000 * 109.46808 * 180.02562 * 1 2 3 24 24 H 1.09002 * 109.47159 * 240.00167 * 2 1 3 25 25 H 1.08992 * 109.47275 * 119.99704 * 2 1 3 26 26 H 0.97001 * 119.99550 * 179.97438 * 8 7 5 27 27 H 0.96999 * 120.00468 * 264.99748 * 13 3 2 28 28 H 1.07995 * 119.56563 * 179.97438 * 16 15 14 29 29 H 1.08002 * 120.33032 * 179.97438 * 17 16 15 30 30 H 1.08002 * 120.75195 * 179.74757 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 1 1.6053 1.9816 0.8418 5 6 3.5418 1.4444 0.1238 6 1 4.1470 1.8891 -0.6524 7 6 4.1432 0.8786 1.2279 8 7 5.4540 0.8806 1.3361 9 14 3.0965 0.1090 2.5700 10 1 2.8757 -1.3271 2.2633 11 1 3.7937 0.2350 3.8750 12 1 1.7877 0.8074 2.6387 13 7 1.6523 2.0975 -1.2518 14 6 0.3964 2.6824 -1.3706 15 7 -0.4448 2.6435 -0.3489 16 6 -1.6457 3.1856 -0.4202 17 6 -2.0708 3.8170 -1.5721 18 6 -1.2214 3.8751 -2.6688 19 6 0.0344 3.3031 -2.5625 20 35 1.2386 3.3568 -4.0195 21 1 -0.3634 0.5137 0.8900 22 1 -0.3633 0.5137 -0.8899 23 1 -0.3633 -1.0277 0.0005 24 1 1.8934 -0.5138 -0.8900 25 1 1.8934 -0.5137 0.8899 26 1 5.8770 0.4829 2.1131 27 1 2.2718 2.1233 -1.9978 28 1 -2.3052 3.1341 0.4335 29 1 -3.0557 4.2574 -1.6210 30 1 -1.5320 4.3597 -3.5827 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000598614312.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:23:08 Heat of formation + Delta-G solvation = 47.789884 kcal Electronic energy + Delta-G solvation = -15128.414884 eV Core-core repulsion = 12584.290716 eV Total energy + Delta-G solvation = -2544.124168 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 284.022 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -39.98977 -36.44054 -33.12233 -32.69935 -31.68520 -30.24772 -28.76535 -26.94580 -23.34848 -22.63282 -22.22020 -19.99926 -17.94206 -16.38593 -16.23919 -15.42896 -15.13744 -14.48351 -14.00160 -13.71559 -13.18452 -12.93372 -12.60864 -12.06520 -11.90740 -11.71679 -11.17962 -11.01866 -10.89945 -10.61512 -10.18978 -10.08772 -9.74288 -9.50564 -9.22875 -9.04681 -8.98408 -8.65664 -7.14604 -6.20372 -4.22902 1.32092 1.71570 1.89699 3.22834 3.34432 3.38283 3.84812 4.10792 4.31082 4.86009 4.98693 5.12852 5.27145 5.47859 5.68387 5.94596 6.01229 6.06335 6.15921 6.28563 6.60851 6.69745 6.71545 6.87690 6.92679 7.25099 7.46182 7.73901 7.92778 8.42269 8.63278 8.82195 9.39438 10.91849 Molecular weight = 284.02amu Principal moments of inertia in cm(-1) A = 0.022645 B = 0.007218 C = 0.005887 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1236.167955 B = 3878.282143 C = 4755.070956 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.139 4.139 3 C 0.248 3.752 4 H 0.054 0.946 5 C -0.536 4.536 6 H 0.079 0.921 7 C 0.079 3.921 8 N -0.892 5.892 9 Si 0.884 3.116 10 H -0.276 1.276 11 H -0.295 1.295 12 H -0.258 1.258 13 N -0.679 5.679 14 C 0.441 3.559 15 N -0.524 5.524 16 C 0.166 3.834 17 C -0.259 4.259 18 C -0.002 4.002 19 C -0.233 4.233 20 Br -0.054 7.054 21 H 0.057 0.943 22 H 0.047 0.953 23 H 0.029 0.971 24 H 0.056 0.944 25 H 0.055 0.945 26 H 0.267 0.733 27 H 0.407 0.593 28 H 0.154 0.846 29 H 0.130 0.870 30 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.741 4.763 -8.579 16.885 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 C -0.177 4.177 3 C 0.144 3.856 4 H 0.072 0.928 5 C -0.574 4.574 6 H 0.097 0.903 7 C -0.125 4.125 8 N -0.529 5.529 9 Si 0.714 3.286 10 H -0.203 1.203 11 H -0.222 1.222 12 H -0.183 1.183 13 N -0.304 5.304 14 C 0.200 3.800 15 N -0.243 5.243 16 C 0.004 3.996 17 C -0.283 4.283 18 C -0.029 4.029 19 C -0.320 4.320 20 Br 0.029 6.971 21 H 0.076 0.924 22 H 0.066 0.934 23 H 0.048 0.952 24 H 0.075 0.925 25 H 0.073 0.927 26 H 0.077 0.923 27 H 0.246 0.754 28 H 0.171 0.829 29 H 0.148 0.852 30 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -12.685 4.181 -8.054 15.597 hybrid contribution -0.705 -0.087 -0.030 0.711 sum -13.390 4.094 -8.084 16.168 Atomic orbital electron populations 1.21861 0.97052 0.98793 1.01968 1.22292 0.94395 1.00031 1.01017 1.19212 0.95506 0.88438 0.82443 0.92783 1.21063 0.88711 1.39792 1.07881 0.90290 1.24827 0.94877 0.95129 0.97658 1.69878 1.08709 1.44492 1.29785 0.86882 0.80988 0.79916 0.80817 1.20314 1.22228 1.18284 1.45482 1.10813 1.55756 1.18390 1.18234 0.87485 0.87098 0.87220 1.67689 1.04526 1.23583 1.28454 1.22564 0.91215 0.89244 0.96574 1.21631 1.01968 1.09585 0.95146 1.21141 0.90512 0.92836 0.98443 1.22006 0.98318 1.16788 0.94933 1.96598 1.60681 1.98287 1.41500 0.92402 0.93426 0.95161 0.92499 0.92723 0.92295 0.75433 0.82867 0.85208 0.84974 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.67 8.44 37.16 0.31 -2.36 16 2 C -0.14 -3.06 5.11 -26.73 -0.14 -3.19 16 3 C 0.25 5.83 1.84 -69.08 -0.13 5.70 16 4 H 0.05 1.36 6.60 -51.93 -0.34 1.02 16 5 C -0.54 -14.68 9.31 -34.45 -0.32 -15.00 16 6 H 0.08 2.32 7.98 -52.48 -0.42 1.90 16 7 C 0.08 2.21 5.45 -17.82 -0.10 2.12 16 8 N -0.89 -26.59 13.96 55.43 0.77 -25.82 16 9 Si 0.88 21.53 24.41 -169.99 -4.15 17.38 16 10 H -0.28 -6.55 6.83 56.52 0.39 -6.17 16 11 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 12 H -0.26 -6.10 6.53 56.52 0.37 -5.73 16 13 N -0.68 -14.11 5.10 -55.03 -0.28 -14.39 16 14 C 0.44 8.21 6.03 -154.96 -0.93 7.27 16 15 N -0.52 -9.41 6.41 -12.41 -0.08 -9.49 16 16 C 0.17 2.31 11.17 -17.56 -0.20 2.11 16 17 C -0.26 -3.14 10.10 -39.42 -0.40 -3.54 16 18 C 0.00 -0.02 9.93 -39.30 -0.39 -0.41 16 19 C -0.23 -3.72 6.27 -39.17 -0.25 -3.97 16 20 Br -0.05 -0.80 32.15 -68.01 -2.19 -2.98 16 21 H 0.06 1.11 7.67 -51.93 -0.40 0.72 16 22 H 0.05 0.90 5.59 -51.93 -0.29 0.61 16 23 H 0.03 0.52 8.14 -51.93 -0.42 0.09 16 24 H 0.06 1.24 8.14 -51.93 -0.42 0.81 16 25 H 0.05 1.26 3.21 -51.93 -0.17 1.10 16 26 H 0.27 7.47 8.31 -40.82 -0.34 7.13 16 27 H 0.41 8.25 6.92 -40.82 -0.28 7.97 16 28 H 0.15 1.64 8.06 -52.49 -0.42 1.22 16 29 H 0.13 1.16 8.06 -52.49 -0.42 0.74 16 30 H 0.13 1.40 8.06 -52.49 -0.42 0.97 16 LS Contribution 262.89 15.07 3.96 3.96 Total: -1.00 -29.30 262.89 -7.69 -36.99 By element: Atomic # 1 Polarization: 8.80 SS G_CDS: -3.20 Total: 5.61 kcal Atomic # 6 Polarization: -8.73 SS G_CDS: -2.53 Total: -11.26 kcal Atomic # 7 Polarization: -50.11 SS G_CDS: 0.41 Total: -49.70 kcal Atomic # 14 Polarization: 21.53 SS G_CDS: -4.15 Total: 17.38 kcal Atomic # 35 Polarization: -0.80 SS G_CDS: -2.19 Total: -2.98 kcal Total LS contribution 3.96 Total: 3.96 kcal Total: -29.30 -7.69 -36.99 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000598614312.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.783 kcal (2) G-P(sol) polarization free energy of solvation -29.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.480 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.690 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.994 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.790 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds