Wall clock time and date at job start Tue Mar 31 2020 06:06:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34759 * 117.00037 * 2 1 4 4 O 1.21512 * 119.99623 * 359.97438 * 3 2 1 5 5 C 1.47390 * 119.99863 * 179.97438 * 3 2 1 6 6 C 1.39843 * 120.10506 * 0.02562 * 5 3 2 7 7 C 1.37616 * 119.91531 * 180.25737 * 6 5 3 8 8 C 1.39083 * 120.13133 * 359.41669 * 7 6 5 9 9 O 1.35702 * 119.89514 * 180.28116 * 8 7 6 10 10 C 1.42900 * 116.99826 * 0.32057 * 9 8 7 11 11 C 1.53003 * 109.47119 * 179.97438 * 10 9 8 12 12 C 1.50702 * 109.47128 * 179.97438 * 11 10 9 13 13 H 1.07991 * 120.00206 * 359.97438 * 12 11 10 14 14 C 1.37881 * 119.99653 * 180.02562 * 12 11 10 15 15 N 1.31508 * 120.00191 * 359.97438 * 14 12 11 16 16 Si 1.86795 * 119.99668 * 180.02562 * 14 12 11 17 17 H 1.48504 * 109.47411 * 359.97438 * 16 14 12 18 18 H 1.48496 * 109.47712 * 119.99877 * 16 14 12 19 19 H 1.48504 * 109.46981 * 239.99753 * 16 14 12 20 20 C 1.38913 * 120.20850 * 0.60470 * 8 7 6 21 21 C 1.37877 * 120.08322 * 359.67933 * 20 8 7 22 22 Cl 1.73599 * 120.06618 * 180.02562 * 21 20 8 23 23 H 1.09005 * 109.47139 * 180.02562 * 1 2 3 24 24 H 1.08995 * 109.47676 * 300.00417 * 1 2 3 25 25 H 1.08999 * 109.46853 * 60.00462 * 1 2 3 26 26 H 1.08002 * 120.03890 * 359.97244 * 6 5 3 27 27 H 1.08007 * 119.93208 * 179.72156 * 7 6 5 28 28 H 1.09000 * 109.47283 * 299.99648 * 10 9 8 29 29 H 1.09004 * 109.47189 * 59.99897 * 10 9 8 30 30 H 1.09000 * 109.46770 * 299.99980 * 11 10 9 31 31 H 1.09004 * 109.47160 * 59.99897 * 11 10 9 32 32 H 0.97002 * 120.00010 * 179.97438 * 15 14 12 33 33 H 1.08002 * 119.95714 * 179.69806 * 20 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0638 1.2007 0.0000 4 8 1.4019 2.2198 -0.0005 5 6 3.5357 1.2778 0.0006 6 6 4.2994 0.1064 0.0006 7 6 5.6734 0.1829 0.0065 8 6 6.3037 1.4227 0.0002 9 8 7.6589 1.4925 0.0002 10 6 8.3723 0.2544 -0.0001 11 6 9.8768 0.5326 -0.0006 12 6 10.6291 -0.7732 -0.0004 13 1 10.0884 -1.7080 0.0004 14 6 12.0079 -0.7744 -0.0002 15 7 12.6665 0.3639 -0.0008 16 14 12.9405 -2.3929 -0.0007 17 1 11.9745 -3.5208 -0.0006 18 1 13.7943 -2.4721 -1.2131 19 1 13.7940 -2.4727 1.2119 20 6 5.5502 2.5898 0.0006 21 6 4.1731 2.5233 0.0006 22 17 3.2319 3.9821 0.0004 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3634 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 3.8115 -0.8572 0.0006 27 1 6.2635 -0.7217 0.0110 28 1 8.1085 -0.3173 0.8897 29 1 8.1084 -0.3167 -0.8904 30 1 10.1403 1.1040 -0.8907 31 1 10.1409 1.1038 0.8894 32 1 13.6365 0.3631 -0.0003 33 1 6.0439 3.5504 0.0006 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000768816966.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:06:59 Heat of formation + Delta-G solvation = -107.358054 kcal Electronic energy + Delta-G solvation = -18983.593091 eV Core-core repulsion = 15614.876138 eV Total energy + Delta-G solvation = -3368.716953 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 284.065 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.70923 -39.79582 -37.65105 -36.40583 -36.26619 -33.51651 -31.53642 -30.67421 -29.95091 -27.75395 -25.35636 -23.67342 -23.06068 -21.40026 -20.56009 -18.49712 -17.86273 -17.08321 -16.48558 -16.23717 -15.81769 -15.64896 -15.13034 -14.58808 -14.43547 -13.86388 -13.84907 -13.37229 -13.02045 -12.82746 -12.39929 -12.22196 -12.19001 -11.68995 -11.45194 -11.25746 -10.95568 -10.94577 -10.91481 -10.67044 -10.06829 -10.05678 -9.79238 -9.39686 -9.02487 -8.54363 -8.32685 -6.18807 -4.24292 0.58000 1.04767 1.93479 2.45865 2.53545 3.21520 3.28618 3.31614 3.53160 3.54149 4.33124 4.53141 4.64080 4.88190 4.89753 4.97233 5.04438 5.16583 5.18131 5.28405 5.65469 5.72455 5.82230 5.82731 5.98153 6.15503 6.21811 6.33182 6.48787 7.30872 7.50461 7.60313 7.64733 7.83680 8.11947 8.81308 9.40926 10.92661 Molecular weight = 284.06amu Principal moments of inertia in cm(-1) A = 0.030617 B = 0.003113 C = 0.002833 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 914.307006 B = 8993.768998 C = 9882.326181 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.039 3.961 2 O -0.358 6.358 3 C 0.510 3.490 4 O -0.494 6.494 5 C -0.183 4.183 6 C -0.005 4.005 7 C -0.225 4.225 8 C 0.199 3.801 9 O -0.302 6.302 10 C 0.059 3.941 11 C 0.025 3.975 12 C -0.529 4.529 13 H 0.060 0.940 14 C 0.061 3.939 15 N -0.888 5.888 16 Si 0.900 3.100 17 H -0.271 1.271 18 H -0.282 1.282 19 H -0.282 1.282 20 C -0.171 4.171 21 C 0.062 3.938 22 Cl -0.031 7.031 23 H 0.100 0.900 24 H 0.062 0.938 25 H 0.062 0.938 26 H 0.147 0.853 27 H 0.147 0.853 28 H 0.058 0.942 29 H 0.058 0.942 30 H 0.030 0.970 31 H 0.030 0.970 32 H 0.264 0.736 33 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.795 0.149 0.006 20.796 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 O -0.275 6.275 3 C 0.355 3.645 4 O -0.383 6.383 5 C -0.185 4.185 6 C -0.024 4.024 7 C -0.244 4.244 8 C 0.150 3.850 9 O -0.213 6.213 10 C -0.014 4.014 11 C -0.013 4.013 12 C -0.567 4.567 13 H 0.078 0.922 14 C -0.141 4.141 15 N -0.526 5.526 16 Si 0.727 3.273 17 H -0.196 1.196 18 H -0.208 1.208 19 H -0.208 1.208 20 C -0.190 4.190 21 C 0.034 3.966 22 Cl -0.002 7.002 23 H 0.119 0.881 24 H 0.081 0.919 25 H 0.081 0.919 26 H 0.164 0.836 27 H 0.165 0.835 28 H 0.076 0.924 29 H 0.076 0.924 30 H 0.048 0.952 31 H 0.048 0.952 32 H 0.074 0.926 33 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -20.778 0.816 0.005 20.794 hybrid contribution 0.336 -0.893 0.000 0.955 sum -20.441 -0.078 0.004 20.442 Atomic orbital electron populations 1.23234 0.76132 1.03556 1.02564 1.86536 1.23393 1.32846 1.84757 1.20887 0.88747 0.81557 0.73320 1.90914 1.66651 1.35319 1.45372 1.18597 0.89682 0.93022 1.17199 1.21168 0.92873 0.97428 0.90916 1.21496 0.95389 0.97944 1.09581 1.19321 0.84615 0.92882 0.88212 1.86198 1.13289 1.36866 1.84943 1.23567 0.95393 0.82115 1.00327 1.19161 0.84668 0.98303 0.99124 1.20971 0.91334 0.91805 1.52607 0.92196 1.24991 0.97676 0.96708 0.94764 1.69975 1.07858 1.25318 1.49431 0.86418 0.79846 0.83260 0.77788 1.19588 1.20792 1.20797 1.20199 0.90442 0.98837 1.09537 1.20567 0.91236 0.87313 0.97486 1.98412 1.71963 1.33835 1.95949 0.88134 0.91908 0.91902 0.83573 0.83520 0.92375 0.92378 0.95207 0.95211 0.92640 0.83191 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.30 10.57 101.05 1.07 1.37 16 2 O -0.36 -3.93 9.81 -40.65 -0.40 -4.33 16 3 C 0.51 6.70 7.88 34.46 0.27 6.98 16 4 O -0.49 -7.33 13.75 -19.28 -0.26 -7.60 16 5 C -0.18 -2.42 5.88 -104.94 -0.62 -3.04 16 6 C -0.01 -0.06 9.61 -39.21 -0.38 -0.44 16 7 C -0.23 -2.97 9.01 -39.50 -0.36 -3.33 16 8 C 0.20 3.04 6.69 -39.02 -0.26 2.78 16 9 O -0.30 -5.49 10.12 -18.81 -0.19 -5.68 16 10 C 0.06 1.14 4.67 37.16 0.17 1.31 16 11 C 0.02 0.60 5.34 -27.88 -0.15 0.45 16 12 C -0.53 -14.00 9.11 -34.44 -0.31 -14.31 16 13 H 0.06 1.50 7.74 -52.49 -0.41 1.10 16 14 C 0.06 1.67 5.46 -17.82 -0.10 1.57 16 15 N -0.89 -25.57 13.29 55.43 0.74 -24.84 16 16 Si 0.90 20.51 29.54 -169.99 -5.02 15.49 16 17 H -0.27 -6.00 7.11 56.52 0.40 -5.60 16 18 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 19 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 20 C -0.17 -2.41 9.75 -39.46 -0.38 -2.80 16 21 C 0.06 0.85 6.35 -39.09 -0.25 0.60 16 22 Cl -0.03 -0.42 26.01 -51.86 -1.35 -1.77 16 23 H 0.10 0.48 8.14 -51.93 -0.42 0.06 16 24 H 0.06 0.47 8.14 -51.93 -0.42 0.05 16 25 H 0.06 0.47 8.14 -51.93 -0.42 0.05 16 26 H 0.15 1.37 7.60 -52.49 -0.40 0.97 16 27 H 0.15 1.79 6.27 -52.48 -0.33 1.46 16 28 H 0.06 1.03 7.64 -51.93 -0.40 0.64 16 29 H 0.06 1.03 7.66 -51.93 -0.40 0.64 16 30 H 0.03 0.78 8.14 -51.93 -0.42 0.36 16 31 H 0.03 0.78 8.14 -51.93 -0.42 0.36 16 32 H 0.26 7.13 8.31 -40.82 -0.34 6.79 16 33 H 0.15 1.96 8.06 -52.49 -0.42 1.54 16 LS Contribution 308.14 15.07 4.64 4.64 Total: -1.00 -29.77 308.14 -6.73 -36.51 By element: Atomic # 1 Polarization: 0.02 SS G_CDS: -3.60 Total: -3.58 kcal Atomic # 6 Polarization: -7.56 SS G_CDS: -1.29 Total: -8.85 kcal Atomic # 7 Polarization: -25.57 SS G_CDS: 0.74 Total: -24.84 kcal Atomic # 8 Polarization: -16.76 SS G_CDS: -0.85 Total: -17.61 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -5.02 Total: 15.49 kcal Atomic # 17 Polarization: -0.42 SS G_CDS: -1.35 Total: -1.77 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -29.77 -6.73 -36.51 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000768816966.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.853 kcal (2) G-P(sol) polarization free energy of solvation -29.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.624 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.735 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.505 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.358 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds