Wall clock time and date at job start Tue Mar 31 2020 05:55:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53004 * 109.46839 * 2 1 4 4 H 1.09005 * 109.47175 * 304.99905 * 3 2 1 5 5 O 1.42902 * 109.47538 * 64.99635 * 3 2 1 6 6 C 1.35919 * 117.00039 * 260.43842 * 5 3 2 7 7 C 1.38708 * 120.06324 * 5.66315 * 6 5 3 8 8 C 1.38146 * 119.95770 * 179.74783 * 7 6 5 9 9 C 1.38281 * 120.08011 * 0.53573 * 8 7 6 10 10 C 1.38247 * 120.11568 * 359.71763 * 9 8 7 11 11 C 1.38259 * 120.04253 * 0.02562 * 10 9 8 12 12 Cl 1.73599 * 120.03916 * 179.97438 * 11 10 9 13 13 C 1.50697 * 109.47221 * 184.99804 * 3 2 1 14 14 O 1.21209 * 120.00583 * 244.99690 * 13 3 2 15 15 O 1.34317 * 120.00218 * 64.99754 * 13 3 2 16 16 C 1.34915 * 117.00644 * 179.97438 * 15 13 3 17 17 H 1.08003 * 119.99629 * 359.97438 * 16 15 13 18 18 C 1.38745 * 120.00368 * 179.97438 * 16 15 13 19 19 N 1.31441 * 120.00098 * 180.02562 * 18 16 15 20 20 Si 1.86802 * 120.00120 * 359.97438 * 18 16 15 21 21 H 1.48504 * 109.46986 * 89.99723 * 20 18 16 22 22 H 1.48503 * 109.47304 * 209.99758 * 20 18 16 23 23 H 1.48500 * 109.46761 * 330.00213 * 20 18 16 24 24 H 1.09010 * 109.46784 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.47488 * 300.00027 * 1 2 3 26 26 H 1.08991 * 109.47334 * 60.00850 * 1 2 3 27 27 H 1.09001 * 109.47302 * 119.99155 * 2 1 3 28 28 H 1.08997 * 109.47707 * 239.99506 * 2 1 3 29 29 H 1.08000 * 120.01744 * 0.02562 * 7 6 5 30 30 H 1.07999 * 119.96436 * 180.25163 * 8 7 6 31 31 H 1.07990 * 119.94340 * 179.74759 * 9 8 7 32 32 H 1.08000 * 119.97840 * 180.02562 * 10 9 8 33 33 H 0.97001 * 120.00138 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 1 1.6053 1.9816 -0.8419 5 8 1.6618 2.0815 1.2210 6 6 0.5680 2.8875 1.1827 7 6 -0.1952 2.9686 0.0273 8 6 -1.3094 3.7845 -0.0075 9 6 -1.6584 4.5290 1.1044 10 6 -0.8969 4.4546 2.2558 11 6 0.2162 3.6356 2.2979 12 17 1.1727 3.5428 3.7436 13 6 3.5418 1.4445 -0.1238 14 8 4.2245 1.8611 0.7870 15 8 4.1240 0.9845 -1.2434 16 6 5.4720 1.0146 -1.2898 17 1 6.0327 1.3972 -0.4497 18 6 6.1379 0.5541 -2.4165 19 7 7.4513 0.5830 -2.4614 20 14 5.1681 -0.1083 -3.8691 21 1 4.8628 1.0012 -4.8078 22 1 5.9707 -1.1428 -4.5698 23 1 3.8998 -0.7098 -3.3845 24 1 -0.3633 -1.0278 0.0005 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 0.5137 -0.8900 27 1 1.8933 -0.5137 0.8901 28 1 1.8934 -0.5139 -0.8899 29 1 0.0789 2.3908 -0.8429 30 1 -1.9061 3.8446 -0.9057 31 1 -2.5275 5.1692 1.0733 32 1 -1.1717 5.0367 3.1231 33 1 7.9168 0.2614 -3.2493 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000786585523.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:55:56 Heat of formation + Delta-G solvation = -92.325314 kcal Electronic energy + Delta-G solvation = -20112.345686 eV Core-core repulsion = 16744.280602 eV Total energy + Delta-G solvation = -3368.065084 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 284.065 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.66564 -39.17406 -37.65322 -36.29527 -35.27806 -33.70005 -32.33544 -30.91516 -30.13908 -27.85853 -25.23333 -23.40725 -22.55671 -21.75137 -19.91690 -18.69084 -18.03378 -16.96957 -16.36661 -15.99842 -15.73154 -15.10272 -14.78255 -14.51870 -14.16966 -14.04504 -13.75484 -13.35466 -12.67065 -12.49923 -12.49715 -12.23127 -11.99773 -11.66931 -11.54321 -11.43204 -11.32390 -10.97225 -10.80658 -10.61073 -10.43435 -10.40646 -9.76718 -9.17637 -8.99227 -8.73611 -8.22659 -6.41645 -4.18339 0.99946 1.18232 2.21803 2.79469 3.04473 3.21309 3.26681 3.31983 3.49165 4.10135 4.19025 4.56753 4.71042 4.76678 4.84242 5.02695 5.08639 5.09797 5.25126 5.31483 5.38388 5.55434 5.68961 5.91589 5.95822 6.02026 6.07415 6.17090 6.24325 6.27747 6.49939 7.25992 7.64576 7.99026 8.55297 8.95033 9.58231 10.66632 Molecular weight = 284.06amu Principal moments of inertia in cm(-1) A = 0.023216 B = 0.004843 C = 0.004413 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1205.750971 B = 5779.906024 C = 6343.903197 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.138 4.138 3 C 0.100 3.900 4 H 0.104 0.896 5 O -0.269 6.269 6 C 0.149 3.851 7 C -0.205 4.205 8 C -0.074 4.074 9 C -0.153 4.153 10 C -0.074 4.074 11 C -0.071 4.071 12 Cl -0.054 7.054 13 C 0.406 3.594 14 O -0.513 6.513 15 O -0.246 6.246 16 C -0.382 4.382 17 H 0.111 0.889 18 C 0.068 3.932 19 N -0.872 5.872 20 Si 0.904 3.096 21 H -0.273 1.273 22 H -0.281 1.281 23 H -0.259 1.259 24 H 0.062 0.938 25 H 0.058 0.942 26 H 0.057 0.943 27 H 0.082 0.918 28 H 0.095 0.905 29 H 0.144 0.856 30 H 0.130 0.870 31 H 0.131 0.869 32 H 0.137 0.863 33 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.712 3.804 3.795 21.398 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.175 4.175 3 C 0.043 3.957 4 H 0.121 0.879 5 O -0.181 6.181 6 C 0.101 3.899 7 C -0.223 4.223 8 C -0.093 4.093 9 C -0.171 4.171 10 C -0.093 4.093 11 C -0.098 4.098 12 Cl -0.025 7.025 13 C 0.249 3.751 14 O -0.405 6.405 15 O -0.155 6.155 16 C -0.458 4.458 17 H 0.128 0.872 18 C -0.136 4.136 19 N -0.511 5.511 20 Si 0.729 3.271 21 H -0.198 1.198 22 H -0.206 1.206 23 H -0.184 1.184 24 H 0.081 0.919 25 H 0.077 0.923 26 H 0.076 0.924 27 H 0.100 0.900 28 H 0.114 0.886 29 H 0.161 0.839 30 H 0.148 0.852 31 H 0.149 0.851 32 H 0.155 0.845 33 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -20.090 3.791 4.203 20.872 hybrid contribution -0.087 -0.270 -0.743 0.795 sum -20.177 3.521 3.461 20.772 Atomic orbital electron populations 1.21940 0.94857 1.02426 1.01945 1.21979 0.96595 0.93907 1.05039 1.21770 0.91646 0.95384 0.86934 0.87886 1.86284 1.41464 1.57352 1.32995 1.18807 0.87528 0.90384 0.93157 1.21442 0.98132 1.04696 0.98044 1.21019 0.95466 0.94322 0.98455 1.20985 1.01170 1.01993 0.92992 1.20903 0.92497 0.96771 0.99148 1.20234 0.97673 1.02917 0.88988 1.98383 1.71246 1.97579 1.35263 1.22384 0.89366 0.80638 0.82693 1.90655 1.64626 1.45236 1.39995 1.83467 1.24895 1.70305 1.36863 1.20650 0.75965 1.43598 1.05552 0.87169 1.24517 0.95116 0.96039 0.97935 1.69601 1.06475 1.44664 1.30319 0.86249 0.80386 0.79142 0.81348 1.19792 1.20616 1.18356 0.91871 0.92316 0.92364 0.89951 0.88643 0.83905 0.85182 0.85147 0.84497 0.90918 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.73 8.49 37.16 0.32 -1.42 16 2 C -0.14 -2.02 5.62 -26.73 -0.15 -2.17 16 3 C 0.10 1.77 2.64 -27.88 -0.07 1.69 16 4 H 0.10 1.55 5.42 -51.93 -0.28 1.27 16 5 O -0.27 -4.84 8.57 -39.35 -0.34 -5.18 16 6 C 0.15 2.21 5.65 -39.19 -0.22 1.99 16 7 C -0.20 -2.44 7.38 -39.44 -0.29 -2.73 16 8 C -0.07 -0.71 10.04 -39.60 -0.40 -1.11 16 9 C -0.15 -1.39 10.04 -39.56 -0.40 -1.79 16 10 C -0.07 -0.80 9.83 -39.57 -0.39 -1.18 16 11 C -0.07 -0.98 6.33 -39.36 -0.25 -1.23 16 12 Cl -0.05 -0.80 28.50 -51.86 -1.48 -2.28 16 13 C 0.41 9.71 7.24 36.00 0.26 9.97 16 14 O -0.51 -14.27 15.74 -25.77 -0.41 -14.67 16 15 O -0.25 -6.38 8.55 -20.70 -0.18 -6.55 16 16 C -0.38 -11.30 10.10 30.92 0.31 -10.98 16 17 H 0.11 3.63 7.09 -52.48 -0.37 3.25 16 18 C 0.07 1.92 5.49 -17.53 -0.10 1.83 16 19 N -0.87 -25.61 13.96 55.48 0.77 -24.84 16 20 Si 0.90 20.80 28.62 -169.99 -4.86 15.94 16 21 H -0.27 -6.11 7.11 56.52 0.40 -5.71 16 22 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 23 H -0.26 -5.73 7.11 56.52 0.40 -5.32 16 24 H 0.06 0.62 8.14 -51.92 -0.42 0.19 16 25 H 0.06 0.69 6.55 -51.93 -0.34 0.35 16 26 H 0.06 0.56 6.74 -51.93 -0.35 0.21 16 27 H 0.08 1.27 8.14 -51.93 -0.42 0.84 16 28 H 0.10 1.41 8.12 -51.93 -0.42 0.98 16 29 H 0.14 1.55 4.28 -52.49 -0.22 1.32 16 30 H 0.13 0.88 8.06 -52.49 -0.42 0.46 16 31 H 0.13 0.82 8.06 -52.49 -0.42 0.40 16 32 H 0.14 1.15 8.06 -52.49 -0.42 0.73 16 33 H 0.28 7.50 8.31 -40.82 -0.34 7.16 16 LS Contribution 301.07 15.07 4.54 4.54 Total: -1.00 -33.33 301.07 -6.57 -39.90 By element: Atomic # 1 Polarization: 3.53 SS G_CDS: -3.24 Total: 0.29 kcal Atomic # 6 Polarization: -5.77 SS G_CDS: -1.38 Total: -7.15 kcal Atomic # 7 Polarization: -25.61 SS G_CDS: 0.77 Total: -24.84 kcal Atomic # 8 Polarization: -25.48 SS G_CDS: -0.92 Total: -26.40 kcal Atomic # 14 Polarization: 20.80 SS G_CDS: -4.86 Total: 15.94 kcal Atomic # 17 Polarization: -0.80 SS G_CDS: -1.48 Total: -2.28 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -33.33 -6.57 -39.90 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000786585523.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.427 kcal (2) G-P(sol) polarization free energy of solvation -33.332 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.759 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.567 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.899 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.325 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds