Wall clock time and date at job start Tue Mar 31 2020 06:03:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.42898 * 109.47147 * 2 1 4 4 C 1.35932 * 116.99964 * 180.02562 * 3 2 1 5 5 C 1.38855 * 120.05696 * 269.97427 * 4 3 2 6 6 Cl 1.73596 * 120.04038 * 0.04645 * 5 4 3 7 7 C 1.38212 * 119.92465 * 180.02562 * 5 4 3 8 8 C 1.38300 * 120.04074 * 0.02562 * 7 5 4 9 9 C 1.38234 * 120.11581 * 359.68552 * 8 7 5 10 10 C 1.38196 * 120.07565 * 0.59000 * 9 8 7 11 11 C 1.50708 * 120.01833 * 179.70226 * 10 9 8 12 12 C 1.50693 * 109.46934 * 264.72526 * 11 10 9 13 13 O 1.21213 * 120.00493 * 0.02562 * 12 11 10 14 14 O 1.34310 * 119.99805 * 179.72720 * 12 11 10 15 15 C 1.34922 * 117.00349 * 180.27868 * 14 12 11 16 16 H 1.08003 * 119.99659 * 359.97438 * 15 14 12 17 17 C 1.38755 * 120.00272 * 179.97438 * 15 14 12 18 18 N 1.31441 * 120.00098 * 0.02562 * 17 15 14 19 19 Si 1.86801 * 119.99825 * 179.97438 * 17 15 14 20 20 H 1.48500 * 109.47099 * 90.00418 * 19 17 15 21 21 H 1.48499 * 109.46984 * 210.00202 * 19 17 15 22 22 H 1.48500 * 109.47117 * 330.00078 * 19 17 15 23 23 H 1.09000 * 109.47287 * 300.00073 * 1 2 3 24 24 H 1.08999 * 109.46776 * 59.99860 * 1 2 3 25 25 H 1.09003 * 109.47211 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.47287 * 239.99927 * 2 1 3 27 27 H 1.08999 * 109.47346 * 119.99634 * 2 1 3 28 28 H 1.07997 * 119.98667 * 180.02562 * 7 5 4 29 29 H 1.07994 * 119.93946 * 179.97438 * 8 7 5 30 30 H 1.08001 * 119.96027 * 180.32127 * 9 8 7 31 31 H 1.09004 * 109.46656 * 144.72420 * 11 10 9 32 32 H 1.08994 * 109.46994 * 24.72863 * 11 10 9 33 33 H 0.96993 * 120.00374 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.3539 1.5253 -0.0005 5 6 4.0438 1.6168 1.2010 6 17 3.1865 1.5027 2.7062 7 6 5.4139 1.7984 1.1973 8 6 6.0970 1.8895 -0.0018 9 6 5.4127 1.7927 -1.1990 10 6 4.0419 1.6168 -1.2009 11 6 3.2963 1.5181 -2.5069 12 6 2.7554 2.8742 -2.8801 13 8 2.9559 3.8266 -2.1576 14 8 2.0563 3.0288 -4.0164 15 6 1.6054 4.2697 -4.2943 16 1 1.8118 5.0838 -3.6152 17 6 0.8766 4.5000 -5.4523 18 7 0.6249 3.5091 -6.2785 19 14 0.2518 6.2180 -5.8365 20 1 1.2719 6.9499 -6.6296 21 1 -1.0079 6.1235 -6.6172 22 1 -0.0054 6.9463 -4.5682 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5138 0.8900 28 1 5.9516 1.8693 2.1312 29 1 7.1675 2.0318 -0.0028 30 1 5.9493 1.8589 -2.1339 31 1 2.4708 0.8140 -2.4016 32 1 3.9736 1.1698 -3.2865 33 1 0.1152 3.6700 -7.0878 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000791504527.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:03:58 Heat of formation + Delta-G solvation = -103.572422 kcal Electronic energy + Delta-G solvation = -20037.514341 eV Core-core repulsion = 16668.961546 eV Total energy + Delta-G solvation = -3368.552795 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 284.065 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.23153 -38.71251 -37.39256 -36.44040 -35.13295 -32.52052 -32.06176 -31.69885 -29.50195 -27.71402 -25.10849 -23.23968 -22.39581 -21.96321 -19.91033 -17.86427 -17.66046 -16.65926 -16.49597 -16.08792 -15.08066 -14.73094 -14.54042 -14.42938 -14.32973 -14.23905 -13.30880 -12.99173 -12.59954 -12.28611 -12.22567 -12.12940 -11.74756 -11.62250 -11.41376 -11.30721 -11.18992 -11.05824 -10.81536 -10.39779 -10.29214 -9.76947 -9.74136 -9.03285 -8.62852 -8.52645 -8.50838 -6.35903 -4.03159 1.11895 1.19456 2.16083 3.15224 3.22082 3.28254 3.38779 3.60478 3.77345 4.05157 4.63428 4.79480 4.91533 5.04574 5.15612 5.19086 5.23221 5.30404 5.32563 5.35782 5.57805 5.74316 5.82887 5.93516 5.99202 6.12903 6.21743 6.31061 6.51113 6.62840 6.86097 7.45397 7.58504 8.01593 8.78948 9.13460 9.91971 10.82438 Molecular weight = 284.06amu Principal moments of inertia in cm(-1) A = 0.020843 B = 0.004758 C = 0.004375 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1343.070221 B = 5883.336612 C = 6397.940802 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.061 3.939 3 O -0.319 6.319 4 C 0.127 3.873 5 C -0.056 4.056 6 Cl -0.066 7.066 7 C -0.106 4.106 8 C -0.115 4.115 9 C -0.090 4.090 10 C -0.063 4.063 11 C -0.065 4.065 12 C 0.406 3.594 13 O -0.544 6.544 14 O -0.217 6.217 15 C -0.378 4.378 16 H 0.094 0.906 17 C 0.041 3.959 18 N -0.868 5.868 19 Si 0.941 3.059 20 H -0.274 1.274 21 H -0.278 1.278 22 H -0.267 1.267 23 H 0.064 0.936 24 H 0.071 0.929 25 H 0.074 0.926 26 H 0.054 0.946 27 H 0.052 0.948 28 H 0.134 0.866 29 H 0.134 0.866 30 H 0.134 0.866 31 H 0.100 0.900 32 H 0.103 0.897 33 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.940 -9.265 12.446 16.997 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.013 4.013 3 O -0.236 6.236 4 C 0.082 3.918 5 C -0.083 4.083 6 Cl -0.037 7.037 7 C -0.124 4.124 8 C -0.133 4.133 9 C -0.108 4.108 10 C -0.064 4.064 11 C -0.102 4.102 12 C 0.252 3.748 13 O -0.441 6.441 14 O -0.125 6.125 15 C -0.455 4.455 16 H 0.112 0.888 17 C -0.162 4.162 18 N -0.506 5.506 19 Si 0.766 3.234 20 H -0.199 1.199 21 H -0.204 1.204 22 H -0.191 1.191 23 H 0.083 0.917 24 H 0.090 0.910 25 H 0.092 0.908 26 H 0.072 0.928 27 H 0.070 0.930 28 H 0.152 0.848 29 H 0.151 0.849 30 H 0.152 0.848 31 H 0.119 0.881 32 H 0.122 0.878 33 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 6.628 -8.930 12.552 16.770 hybrid contribution -0.268 0.714 -0.067 0.765 sum 6.360 -8.216 12.486 16.243 Atomic orbital electron populations 1.21753 0.92892 1.02345 1.03886 1.22740 0.96009 0.82115 1.00466 1.86167 1.16560 1.26768 1.94080 1.18161 0.83618 0.99791 0.90253 1.21285 0.92865 1.07647 0.86545 1.98345 1.77681 1.96599 1.31105 1.20910 0.91484 1.00749 0.99283 1.21042 1.00211 1.00590 0.91450 1.21077 0.93020 0.97809 0.98878 1.19730 0.93674 0.99490 0.93520 1.19977 1.00586 0.95682 0.93998 1.22751 0.80334 0.89926 0.81817 1.90584 1.58892 1.42064 1.52511 1.83863 1.58496 1.34240 1.35880 1.21204 1.33395 0.83785 1.07078 0.88792 1.25297 0.96363 0.99673 0.94860 1.69987 1.37776 1.31274 1.11562 0.85704 0.78255 0.80548 0.78883 1.19943 1.20366 1.19130 0.91693 0.91030 0.90770 0.92753 0.92988 0.84826 0.84860 0.84844 0.88135 0.87837 0.92200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.84 10.28 37.16 0.38 -1.46 16 2 C 0.06 0.82 6.45 37.16 0.24 1.06 16 3 O -0.32 -5.63 8.79 -19.53 -0.17 -5.80 16 4 C 0.13 2.16 5.69 -39.20 -0.22 1.94 16 5 C -0.06 -0.85 6.33 -39.36 -0.25 -1.09 16 6 Cl -0.07 -0.91 28.51 -51.86 -1.48 -2.39 16 7 C -0.11 -1.33 9.83 -39.57 -0.39 -1.72 16 8 C -0.11 -1.38 10.04 -39.56 -0.40 -1.78 16 9 C -0.09 -1.27 9.68 -39.60 -0.38 -1.65 16 10 C -0.06 -1.07 4.39 -104.48 -0.46 -1.53 16 11 C -0.06 -1.19 5.67 -29.03 -0.16 -1.36 16 12 C 0.41 10.23 7.90 36.00 0.28 10.51 16 13 O -0.54 -15.15 15.27 -19.05 -0.29 -15.44 16 14 O -0.22 -6.31 9.75 -20.71 -0.20 -6.51 16 15 C -0.38 -11.42 9.65 30.92 0.30 -11.12 16 16 H 0.09 2.88 6.86 -52.48 -0.36 2.52 16 17 C 0.04 1.19 5.49 -17.53 -0.10 1.09 16 18 N -0.87 -25.69 13.67 55.48 0.76 -24.93 16 19 Si 0.94 21.74 29.55 -169.99 -5.02 16.71 16 20 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 21 H -0.28 -6.17 7.11 56.52 0.40 -5.77 16 22 H -0.27 -6.11 7.11 56.52 0.40 -5.71 16 23 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 24 H 0.07 0.99 8.14 -51.93 -0.42 0.56 16 25 H 0.07 0.69 8.14 -51.93 -0.42 0.27 16 26 H 0.05 0.67 7.18 -51.93 -0.37 0.30 16 27 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 28 H 0.13 1.32 8.06 -52.49 -0.42 0.90 16 29 H 0.13 1.16 8.06 -52.49 -0.42 0.74 16 30 H 0.13 1.63 8.06 -52.49 -0.42 1.20 16 31 H 0.10 1.72 6.42 -51.93 -0.33 1.39 16 32 H 0.10 1.62 8.05 -51.93 -0.42 1.20 16 33 H 0.27 7.27 8.31 -40.82 -0.34 6.93 16 LS Contribution 311.79 15.07 4.70 4.70 Total: -1.00 -34.95 311.79 -6.44 -41.39 By element: Atomic # 1 Polarization: 2.95 SS G_CDS: -3.58 Total: -0.62 kcal Atomic # 6 Polarization: -5.95 SS G_CDS: -1.16 Total: -7.11 kcal Atomic # 7 Polarization: -25.69 SS G_CDS: 0.76 Total: -24.93 kcal Atomic # 8 Polarization: -27.09 SS G_CDS: -0.66 Total: -27.76 kcal Atomic # 14 Polarization: 21.74 SS G_CDS: -5.02 Total: 16.71 kcal Atomic # 17 Polarization: -0.91 SS G_CDS: -1.48 Total: -2.39 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -34.95 -6.44 -41.39 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000791504527.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.179 kcal (2) G-P(sol) polarization free energy of solvation -34.950 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.129 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.393 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.572 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds